| 6 |  | * redistribute this software in source and binary code form, provided | 
| 7 |  | * that the following conditions are met: | 
| 8 |  | * | 
| 9 | < | * 1. Acknowledgement of the program authors must be made in any | 
| 10 | < | *    publication of scientific results based in part on use of the | 
| 11 | < | *    program.  An acceptable form of acknowledgement is citation of | 
| 12 | < | *    the article in which the program was described (Matthew | 
| 13 | < | *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher | 
| 14 | < | *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented | 
| 15 | < | *    Parallel Simulation Engine for Molecular Dynamics," | 
| 16 | < | *    J. Comput. Chem. 26, pp. 252-271 (2005)) | 
| 17 | < | * | 
| 18 | < | * 2. Redistributions of source code must retain the above copyright | 
| 9 | > | * 1. Redistributions of source code must retain the above copyright | 
| 10 |  | *    notice, this list of conditions and the following disclaimer. | 
| 11 |  | * | 
| 12 | < | * 3. Redistributions in binary form must reproduce the above copyright | 
| 12 | > | * 2. Redistributions in binary form must reproduce the above copyright | 
| 13 |  | *    notice, this list of conditions and the following disclaimer in the | 
| 14 |  | *    documentation and/or other materials provided with the | 
| 15 |  | *    distribution. | 
| 29 |  | * University of Notre Dame has been advised of the possibility of | 
| 30 |  | * such damages. | 
| 31 |  | * | 
| 32 | < | * | 
| 33 | < | *  OptionSectionParser.cpp | 
| 34 | < | *  OOPSE-2.0 | 
| 35 | < | * | 
| 32 | > | * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your | 
| 33 | > | * research, please cite the appropriate papers when you publish your | 
| 34 | > | * work.  Good starting points are: | 
| 35 | > | * | 
| 36 | > | * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). | 
| 37 | > | * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). | 
| 38 | > | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008). | 
| 39 | > | * [4] Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010). | 
| 40 | > | * [4] , Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). * | 
| 41 |  | *  Created by Charles F. Vardeman II on 11/15/05. | 
| 42 |  | *  @author  Charles F. Vardeman II | 
| 43 | < | *  @version $Id: OptionSectionParser.cpp,v 1.3 2005-12-05 22:23:57 gezelter Exp $ | 
| 43 | > | *  @version $Id$ | 
| 44 |  | * | 
| 45 |  | */ | 
| 46 |  |  | 
| 47 |  | #include "io/OptionSectionParser.hpp" | 
| 48 |  | #include "types/AtomType.hpp" | 
| 49 | < | #include "UseTheForce/ForceField.hpp" | 
| 49 | > | #include "brains/ForceField.hpp" | 
| 50 |  | #include "utils/simError.h" | 
| 51 |  | #include "utils/StringUtils.hpp" | 
| 52 | < | namespace oopse { | 
| 52 | > | namespace OpenMD { | 
| 53 |  |  | 
| 54 |  | OptionSectionParser::OptionSectionParser(ForceFieldOptions& options) : options_(options) { | 
| 55 |  | setSectionName("Options"); | 
| 78 |  | options_.validateOptions(); | 
| 79 |  | } | 
| 80 |  |  | 
| 81 | < | } //end namespace oopse | 
| 81 | > | } //end namespace OpenMD |