--- trunk/src/math/AlphaHull.hpp 2010/01/08 17:15:27 1402 +++ trunk/src/math/AlphaHull.hpp 2013/06/18 17:47:37 1886 @@ -34,17 +34,17 @@ * * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). - * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). - * [4] Vardeman & Gezelter, in progress (2009). + * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008). + * [4] Kuang & Gezelter, J. Chem. Phys. 133, 164101 (2010). + * [4] , Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). * * - * * AlphaHull.hpp * * Purpose: To calculate alphahull, hull volume using the QuickHull algorithm provided by QHull. * * Created by Charles F. Vardeman II on 16 Dec 2009. * @author Charles F. Vardeman II - * @version $Id: ConvexHull.hpp,v 1.19 2009-11-25 20:02:01 gezelter Exp $ + * @version $Id$ * */ @@ -60,34 +60,34 @@ #include #include - +using namespace std; namespace OpenMD { class AlphaHull : public Hull { public: - - AlphaHull(double alpha); + + AlphaHull(RealType alpha); virtual ~AlphaHull(){}; - - void computeHull( std::vector bodydoubles ); - + + void computeHull( vector bodydoubles ); + /* Total area of Hull*/ - RealType getArea(){return area_;} - + RealType getArea(){ return area_; } + /* Total Volume enclosed by Hull */ RealType getVolume(){ return volume_; } - - std::vector getMesh(){return Triangles_;} + + vector getMesh(){ return Triangles_; } void printHull(const std::string& geomFileName); - + protected: RealType volume_; RealType area_; int dim_; - double alpha_; + RealType alpha_; const std::string options_; private: - std::vector Triangles_; + vector Triangles_; }; } -#endif /*MATH_CONVEXHULL_HPP_*/ +#endif