| 1 | < | /* Copyright (c) 2008 The University of Notre Dame. All Rights Reserved. | 
| 1 | > | /* Copyright (c) 2008, 2009 The University of Notre Dame. All Rights Reserved. | 
| 2 |  | * | 
| 3 |  | * The University of Notre Dame grants you ("Licensee") a | 
| 4 |  | * non-exclusive, royalty free, license to use, modify and | 
| 44 |  | * | 
| 45 |  | *  Created by Charles F. Vardeman II on 11 Dec 2006. | 
| 46 |  | *  @author  Charles F. Vardeman II | 
| 47 | < | *  @version $Id: ConvexHull.hpp,v 1.17 2008-11-14 21:54:54 chuckv Exp $ | 
| 47 | > | *  @version $Id: ConvexHull.hpp,v 1.18 2009-10-20 20:05:28 chuckv Exp $ | 
| 48 |  | * | 
| 49 |  | */ | 
| 50 |  |  | 
| 59 |  | #include <cassert> | 
| 60 |  | #include <vector> | 
| 61 |  | #include <string> | 
| 62 | – | extern "C" | 
| 63 | – | { | 
| 64 | – | #if defined(HAVE_QHULL) | 
| 65 | – | #include <qhull/qhull.h> | 
| 66 | – | #include <qhull/mem.h> | 
| 67 | – | #include <qhull/qset.h> | 
| 68 | – | #include <qhull/geom.h> | 
| 69 | – | #include <qhull/merge.h> | 
| 70 | – | #include <qhull/poly.h> | 
| 71 | – | #include <qhull/io.h> | 
| 72 | – | #include <qhull/stat.h> | 
| 73 | – | #endif | 
| 74 | – | } | 
| 75 | – | #ifdef IS_MPI | 
| 76 | – | #include <mpi.h> | 
| 77 | – | #endif | 
| 62 |  |  | 
| 63 |  |  | 
| 64 |  | namespace oopse { | 
| 65 |  | class ConvexHull : public Hull { | 
| 66 |  | public: | 
| 83 | – | ConvexHull(); | 
| 67 |  |  | 
| 68 | + | ConvexHull(); | 
| 69 |  | virtual ~ConvexHull(){}; | 
| 70 | < | void computeHull(std::vector<StuntDouble*> bodydoubles); | 
| 71 | < | RealType getArea(){return area_;} //Total area of Hull | 
| 72 | < | int getNs(){return Ns_;}  //Number of Surface Atoms | 
| 73 | < | RealType getVolume(){return volume_;} //Total Volume inclosed by Hull | 
| 74 | < | std::vector< StuntDouble* > getSurfaceAtoms(){return surfaceSDs_;} //Returns a list of surface atoms | 
| 70 | > |  | 
| 71 | > | void computeHull( std::vector<StuntDouble*> bodydoubles ); | 
| 72 | > |  | 
| 73 | > | /* Total area of Hull*/ | 
| 74 | > | RealType getArea(){return area_;} | 
| 75 | > |  | 
| 76 | > | /* Total Volume enclosed by Hull */ | 
| 77 | > | RealType getVolume(){ return volume_; } | 
| 78 | > |  | 
| 79 |  | std::vector<Triangle> getMesh(){return Triangles_;} | 
| 92 | – | int getNMeshElements() {return nTriangles_;} | 
| 80 |  | void printHull(const std::string& geomFileName); | 
| 81 | + |  | 
| 82 |  | protected: | 
| 83 | < | double volume_; | 
| 84 | < | double area_; | 
| 83 | > | RealType volume_; | 
| 84 | > | RealType area_; | 
| 85 |  | int dim_; | 
| 98 | – | int Ns_; | 
| 99 | – | int nTriangles_; | 
| 100 | – | std::vector<StuntDouble*> surfaceSDs_; | 
| 86 |  | const std::string options_; | 
| 87 | < |  | 
| 88 | < | private: | 
| 87 | > |  | 
| 88 | > | private: | 
| 89 |  | std::vector<Triangle> Triangles_; | 
| 105 | – |  | 
| 106 | – | #ifdef IS_MPI | 
| 107 | – | int* NstoProc_; | 
| 108 | – | int* vecNstoProc_; | 
| 109 | – | int* displs_; | 
| 110 | – | int* vecdispls_; | 
| 111 | – | int Nsglobal_; | 
| 112 | – | int nproc_; | 
| 113 | – | int myrank_; | 
| 114 | – | struct surfacePt_{ | 
| 115 | – | double x,y,z; | 
| 116 | – | }; | 
| 117 | – |  | 
| 118 | – | MPI::Datatype surfacePtType; | 
| 119 | – | std::vector<surfacePt_> surfacePtsLocal_; | 
| 120 | – | std::vector<surfacePt_> surfacePtsGlobal_; | 
| 121 | – | #endif | 
| 122 | – |  | 
| 90 |  | }; | 
| 91 |  | } | 
| 125 | – |  | 
| 92 |  | #endif /*MATH_CONVEXHULL_HPP_*/ |