| 1 |
< |
/* $ANTLR 2.7.7 (20120725): "MDTreeParser.g" -> "MDTreeParser.cpp"$ */ |
| 1 |
> |
/* $ANTLR 2.7.7 (20140107): "MDTreeParser.g" -> "MDTreeParser.cpp"$ */ |
| 2 |
|
#include "MDTreeParser.hpp" |
| 3 |
|
#include <antlr/Token.hpp> |
| 4 |
|
#include <antlr/AST.hpp> |
| 546 |
|
} |
| 547 |
|
|
| 548 |
|
int MDTreeParser::intConst(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 549 |
< |
#line 294 "MDTreeParser.g" |
| 549 |
> |
#line 314 "MDTreeParser.g" |
| 550 |
|
int ival; |
| 551 |
|
#line 552 "MDTreeParser.cpp" |
| 552 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST intConst_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 562 |
|
i1 = _t; |
| 563 |
|
match(_t,NUM_INT); |
| 564 |
|
_t = _t->getNextSibling(); |
| 565 |
< |
#line 295 "MDTreeParser.g" |
| 565 |
> |
#line 315 "MDTreeParser.g" |
| 566 |
|
ival = lexi_cast<int>(i1->getText()); |
| 567 |
|
#line 568 "MDTreeParser.cpp" |
| 568 |
|
break; |
| 572 |
|
i2 = _t; |
| 573 |
|
match(_t,NUM_LONG); |
| 574 |
|
_t = _t->getNextSibling(); |
| 575 |
< |
#line 296 "MDTreeParser.g" |
| 575 |
> |
#line 316 "MDTreeParser.g" |
| 576 |
|
ival = lexi_cast<int>(i2->getText()); |
| 577 |
|
#line 578 "MDTreeParser.cpp" |
| 578 |
|
break; |
| 593 |
|
} |
| 594 |
|
|
| 595 |
|
RealType MDTreeParser::floatConst(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 596 |
< |
#line 306 "MDTreeParser.g" |
| 596 |
> |
#line 326 "MDTreeParser.g" |
| 597 |
|
RealType dval; |
| 598 |
|
#line 599 "MDTreeParser.cpp" |
| 599 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST floatConst_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 609 |
|
d1 = _t; |
| 610 |
|
match(_t,NUM_FLOAT); |
| 611 |
|
_t = _t->getNextSibling(); |
| 612 |
< |
#line 307 "MDTreeParser.g" |
| 612 |
> |
#line 327 "MDTreeParser.g" |
| 613 |
|
dval = lexi_cast<RealType>(d1->getText()); |
| 614 |
|
#line 615 "MDTreeParser.cpp" |
| 615 |
|
break; |
| 619 |
|
d2 = _t; |
| 620 |
|
match(_t,NUM_DOUBLE); |
| 621 |
|
_t = _t->getNextSibling(); |
| 622 |
< |
#line 308 "MDTreeParser.g" |
| 622 |
> |
#line 328 "MDTreeParser.g" |
| 623 |
|
dval = lexi_cast<RealType>(d2->getText()); |
| 624 |
|
#line 625 "MDTreeParser.cpp" |
| 625 |
|
break; |
| 640 |
|
} |
| 641 |
|
|
| 642 |
|
RealType MDTreeParser::doubleNumber(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 643 |
< |
#line 300 "MDTreeParser.g" |
| 643 |
> |
#line 320 "MDTreeParser.g" |
| 644 |
|
RealType dval; |
| 645 |
|
#line 646 "MDTreeParser.cpp" |
| 646 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST doubleNumber_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 657 |
|
ic = (_t == ASTNULL) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 658 |
|
intConst(_t); |
| 659 |
|
_t = _retTree; |
| 660 |
< |
#line 301 "MDTreeParser.g" |
| 660 |
> |
#line 321 "MDTreeParser.g" |
| 661 |
|
dval = lexi_cast<RealType>(ic->getText()); |
| 662 |
|
#line 663 "MDTreeParser.cpp" |
| 663 |
|
break; |
| 668 |
|
fc = (_t == ASTNULL) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 669 |
|
floatConst(_t); |
| 670 |
|
_t = _retTree; |
| 671 |
< |
#line 302 "MDTreeParser.g" |
| 671 |
> |
#line 322 "MDTreeParser.g" |
| 672 |
|
dval = lexi_cast<RealType>(fc->getText()); |
| 673 |
|
#line 674 "MDTreeParser.cpp" |
| 674 |
|
break; |
| 749 |
|
_t = _retTree; |
| 750 |
|
break; |
| 751 |
|
} |
| 752 |
+ |
case CONSTRAINT: |
| 753 |
+ |
{ |
| 754 |
+ |
constraintblock(_t); |
| 755 |
+ |
_t = _retTree; |
| 756 |
+ |
break; |
| 757 |
+ |
} |
| 758 |
|
default: |
| 759 |
|
{ |
| 760 |
|
throw ANTLR_USE_NAMESPACE(antlr)NoViableAltException(_t); |
| 771 |
|
|
| 772 |
|
void MDTreeParser::atomblock(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 773 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST atomblock_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 774 |
< |
#line 119 "MDTreeParser.g" |
| 774 |
> |
#line 120 "MDTreeParser.g" |
| 775 |
|
|
| 776 |
|
int index; |
| 777 |
|
|
| 778 |
< |
#line 773 "MDTreeParser.cpp" |
| 778 |
> |
#line 779 "MDTreeParser.cpp" |
| 779 |
|
|
| 780 |
|
try { // for error handling |
| 781 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST __t39 = _t; |
| 784 |
|
_t = _t->getFirstChild(); |
| 785 |
|
index=intConst(_t); |
| 786 |
|
_t = _retTree; |
| 787 |
< |
#line 123 "MDTreeParser.g" |
| 787 |
> |
#line 124 "MDTreeParser.g" |
| 788 |
|
AtomStamp* currAtomStamp = new AtomStamp(index); blockStack.push(currAtomStamp); |
| 789 |
< |
#line 784 "MDTreeParser.cpp" |
| 789 |
> |
#line 790 "MDTreeParser.cpp" |
| 790 |
|
{ // ( ... )* |
| 791 |
|
for (;;) { |
| 792 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 807 |
|
_t = _t->getNextSibling(); |
| 808 |
|
_t = __t39; |
| 809 |
|
_t = _t->getNextSibling(); |
| 810 |
< |
#line 125 "MDTreeParser.g" |
| 810 |
> |
#line 126 "MDTreeParser.g" |
| 811 |
|
|
| 812 |
|
blockStack.top()->validate(); |
| 813 |
|
blockStack.pop(); |
| 814 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 815 |
|
currMoleculeStamp->addAtomStamp(currAtomStamp); |
| 816 |
|
|
| 817 |
< |
#line 812 "MDTreeParser.cpp" |
| 817 |
> |
#line 818 "MDTreeParser.cpp" |
| 818 |
|
} |
| 819 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 820 |
|
reportError(ex); |
| 832 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp22_AST_in = _t; |
| 833 |
|
match(_t,BOND); |
| 834 |
|
_t = _t->getFirstChild(); |
| 835 |
< |
#line 145 "MDTreeParser.g" |
| 835 |
> |
#line 146 "MDTreeParser.g" |
| 836 |
|
BondStamp* currBondStamp = new BondStamp(); blockStack.push(currBondStamp); |
| 837 |
< |
#line 832 "MDTreeParser.cpp" |
| 837 |
> |
#line 838 "MDTreeParser.cpp" |
| 838 |
|
{ // ( ... )* |
| 839 |
|
for (;;) { |
| 840 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 855 |
|
_t = _t->getNextSibling(); |
| 856 |
|
_t = __t46; |
| 857 |
|
_t = _t->getNextSibling(); |
| 858 |
< |
#line 147 "MDTreeParser.g" |
| 858 |
> |
#line 148 "MDTreeParser.g" |
| 859 |
|
|
| 860 |
|
blockStack.pop(); |
| 861 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 862 |
|
currMoleculeStamp->addBondStamp(currBondStamp); |
| 863 |
|
|
| 864 |
< |
#line 859 "MDTreeParser.cpp" |
| 864 |
> |
#line 865 "MDTreeParser.cpp" |
| 865 |
|
} |
| 866 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 867 |
|
reportError(ex); |
| 879 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp24_AST_in = _t; |
| 880 |
|
match(_t,BEND); |
| 881 |
|
_t = _t->getFirstChild(); |
| 882 |
< |
#line 163 "MDTreeParser.g" |
| 882 |
> |
#line 164 "MDTreeParser.g" |
| 883 |
|
BendStamp* currBendStamp = new BendStamp(); blockStack.push(currBendStamp); |
| 884 |
< |
#line 879 "MDTreeParser.cpp" |
| 884 |
> |
#line 885 "MDTreeParser.cpp" |
| 885 |
|
{ // ( ... )* |
| 886 |
|
for (;;) { |
| 887 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 902 |
|
_t = _t->getNextSibling(); |
| 903 |
|
_t = __t52; |
| 904 |
|
_t = _t->getNextSibling(); |
| 905 |
< |
#line 165 "MDTreeParser.g" |
| 905 |
> |
#line 166 "MDTreeParser.g" |
| 906 |
|
|
| 907 |
|
blockStack.top()->validate(); |
| 908 |
|
blockStack.pop(); |
| 909 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 910 |
|
currMoleculeStamp->addBendStamp(currBendStamp); |
| 911 |
|
|
| 912 |
< |
#line 907 "MDTreeParser.cpp" |
| 912 |
> |
#line 913 "MDTreeParser.cpp" |
| 913 |
|
} |
| 914 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 915 |
|
reportError(ex); |
| 927 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp26_AST_in = _t; |
| 928 |
|
match(_t,TORSION); |
| 929 |
|
_t = _t->getFirstChild(); |
| 930 |
< |
#line 182 "MDTreeParser.g" |
| 930 |
> |
#line 183 "MDTreeParser.g" |
| 931 |
|
TorsionStamp* currTorsionStamp = new TorsionStamp(); blockStack.push(currTorsionStamp); |
| 932 |
< |
#line 927 "MDTreeParser.cpp" |
| 932 |
> |
#line 933 "MDTreeParser.cpp" |
| 933 |
|
{ // ( ... )* |
| 934 |
|
for (;;) { |
| 935 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 950 |
|
_t = _t->getNextSibling(); |
| 951 |
|
_t = __t58; |
| 952 |
|
_t = _t->getNextSibling(); |
| 953 |
< |
#line 184 "MDTreeParser.g" |
| 953 |
> |
#line 185 "MDTreeParser.g" |
| 954 |
|
|
| 955 |
|
blockStack.top()->validate(); |
| 956 |
|
blockStack.pop(); |
| 957 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 958 |
|
currMoleculeStamp->addTorsionStamp(currTorsionStamp); |
| 959 |
|
|
| 960 |
< |
#line 955 "MDTreeParser.cpp" |
| 960 |
> |
#line 961 "MDTreeParser.cpp" |
| 961 |
|
} |
| 962 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 963 |
|
reportError(ex); |
| 975 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp28_AST_in = _t; |
| 976 |
|
match(_t,INVERSION); |
| 977 |
|
_t = _t->getFirstChild(); |
| 978 |
< |
#line 201 "MDTreeParser.g" |
| 978 |
> |
#line 202 "MDTreeParser.g" |
| 979 |
|
InversionStamp* currInversionStamp = new InversionStamp(); blockStack.push(currInversionStamp); |
| 980 |
< |
#line 975 "MDTreeParser.cpp" |
| 980 |
> |
#line 981 "MDTreeParser.cpp" |
| 981 |
|
{ // ( ... )* |
| 982 |
|
for (;;) { |
| 983 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 984 |
|
_t = ASTNULL; |
| 985 |
< |
if ((_t->getType() == CENTER || _t->getType() == ASSIGNEQUAL)) { |
| 985 |
> |
if ((_t->getType() == CENTER || _t->getType() == SATELLITES || _t->getType() == ASSIGNEQUAL)) { |
| 986 |
|
inversionstatement(_t); |
| 987 |
|
_t = _retTree; |
| 988 |
|
} |
| 998 |
|
_t = _t->getNextSibling(); |
| 999 |
|
_t = __t64; |
| 1000 |
|
_t = _t->getNextSibling(); |
| 1001 |
< |
#line 203 "MDTreeParser.g" |
| 1001 |
> |
#line 204 "MDTreeParser.g" |
| 1002 |
|
|
| 1003 |
|
blockStack.top()->validate(); |
| 1004 |
|
blockStack.pop(); |
| 1005 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 1006 |
|
currMoleculeStamp->addInversionStamp(currInversionStamp); |
| 1007 |
|
|
| 1008 |
< |
#line 1003 "MDTreeParser.cpp" |
| 1008 |
> |
#line 1009 "MDTreeParser.cpp" |
| 1009 |
|
} |
| 1010 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1011 |
|
reportError(ex); |
| 1017 |
|
|
| 1018 |
|
void MDTreeParser::rigidbodyblock(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1019 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST rigidbodyblock_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1020 |
< |
#line 220 "MDTreeParser.g" |
| 1020 |
> |
#line 223 "MDTreeParser.g" |
| 1021 |
|
|
| 1022 |
|
int index; |
| 1023 |
|
|
| 1024 |
< |
#line 1019 "MDTreeParser.cpp" |
| 1024 |
> |
#line 1025 "MDTreeParser.cpp" |
| 1025 |
|
|
| 1026 |
|
try { // for error handling |
| 1027 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST __t70 = _t; |
| 1027 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST __t71 = _t; |
| 1028 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp30_AST_in = _t; |
| 1029 |
|
match(_t,RIGIDBODY); |
| 1030 |
|
_t = _t->getFirstChild(); |
| 1031 |
|
index=intConst(_t); |
| 1032 |
|
_t = _retTree; |
| 1033 |
< |
#line 224 "MDTreeParser.g" |
| 1033 |
> |
#line 227 "MDTreeParser.g" |
| 1034 |
|
RigidBodyStamp* currRigidBodyStamp = new RigidBodyStamp(index); blockStack.push(currRigidBodyStamp); |
| 1035 |
< |
#line 1030 "MDTreeParser.cpp" |
| 1035 |
> |
#line 1036 "MDTreeParser.cpp" |
| 1036 |
|
{ // ( ... )* |
| 1037 |
|
for (;;) { |
| 1038 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1042 |
|
_t = _retTree; |
| 1043 |
|
} |
| 1044 |
|
else { |
| 1045 |
< |
goto _loop72; |
| 1045 |
> |
goto _loop73; |
| 1046 |
|
} |
| 1047 |
|
|
| 1048 |
|
} |
| 1049 |
< |
_loop72:; |
| 1049 |
> |
_loop73:; |
| 1050 |
|
} // ( ... )* |
| 1051 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp31_AST_in = _t; |
| 1052 |
|
match(_t,ENDBLOCK); |
| 1053 |
|
_t = _t->getNextSibling(); |
| 1054 |
< |
_t = __t70; |
| 1054 |
> |
_t = __t71; |
| 1055 |
|
_t = _t->getNextSibling(); |
| 1056 |
< |
#line 226 "MDTreeParser.g" |
| 1056 |
> |
#line 229 "MDTreeParser.g" |
| 1057 |
|
|
| 1058 |
|
blockStack.top()->validate(); |
| 1059 |
|
blockStack.pop(); |
| 1060 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 1061 |
|
currMoleculeStamp->addRigidBodyStamp(currRigidBodyStamp); |
| 1062 |
|
|
| 1063 |
< |
#line 1058 "MDTreeParser.cpp" |
| 1063 |
> |
#line 1064 "MDTreeParser.cpp" |
| 1064 |
|
} |
| 1065 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1066 |
|
reportError(ex); |
| 1074 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST cutoffgroupblock_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1075 |
|
|
| 1076 |
|
try { // for error handling |
| 1077 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST __t76 = _t; |
| 1077 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST __t77 = _t; |
| 1078 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp32_AST_in = _t; |
| 1079 |
|
match(_t,CUTOFFGROUP); |
| 1080 |
|
_t = _t->getFirstChild(); |
| 1081 |
< |
#line 243 "MDTreeParser.g" |
| 1081 |
> |
#line 246 "MDTreeParser.g" |
| 1082 |
|
CutoffGroupStamp* currCutoffGroupStamp = new CutoffGroupStamp(); blockStack.push(currCutoffGroupStamp); |
| 1083 |
< |
#line 1078 "MDTreeParser.cpp" |
| 1083 |
> |
#line 1084 "MDTreeParser.cpp" |
| 1084 |
|
{ // ( ... )* |
| 1085 |
|
for (;;) { |
| 1086 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1090 |
|
_t = _retTree; |
| 1091 |
|
} |
| 1092 |
|
else { |
| 1093 |
< |
goto _loop78; |
| 1093 |
> |
goto _loop79; |
| 1094 |
|
} |
| 1095 |
|
|
| 1096 |
|
} |
| 1097 |
< |
_loop78:; |
| 1097 |
> |
_loop79:; |
| 1098 |
|
} // ( ... )* |
| 1099 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp33_AST_in = _t; |
| 1100 |
|
match(_t,ENDBLOCK); |
| 1101 |
|
_t = _t->getNextSibling(); |
| 1102 |
< |
_t = __t76; |
| 1102 |
> |
_t = __t77; |
| 1103 |
|
_t = _t->getNextSibling(); |
| 1104 |
< |
#line 245 "MDTreeParser.g" |
| 1104 |
> |
#line 248 "MDTreeParser.g" |
| 1105 |
|
|
| 1106 |
|
blockStack.top()->validate(); |
| 1107 |
|
blockStack.pop(); |
| 1108 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 1109 |
|
currMoleculeStamp->addCutoffGroupStamp(currCutoffGroupStamp); |
| 1110 |
|
|
| 1111 |
< |
#line 1106 "MDTreeParser.cpp" |
| 1111 |
> |
#line 1112 "MDTreeParser.cpp" |
| 1112 |
|
} |
| 1113 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1114 |
|
reportError(ex); |
| 1120 |
|
|
| 1121 |
|
void MDTreeParser::fragmentblock(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1122 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST fragmentblock_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1123 |
< |
#line 262 "MDTreeParser.g" |
| 1123 |
> |
#line 265 "MDTreeParser.g" |
| 1124 |
|
int ival; |
| 1125 |
< |
#line 1120 "MDTreeParser.cpp" |
| 1125 |
> |
#line 1126 "MDTreeParser.cpp" |
| 1126 |
|
|
| 1127 |
|
try { // for error handling |
| 1128 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST __t82 = _t; |
| 1128 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST __t83 = _t; |
| 1129 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp34_AST_in = _t; |
| 1130 |
|
match(_t,FRAGMENT); |
| 1131 |
|
_t = _t->getFirstChild(); |
| 1132 |
|
ival=intConst(_t); |
| 1133 |
|
_t = _retTree; |
| 1134 |
< |
#line 263 "MDTreeParser.g" |
| 1134 |
> |
#line 266 "MDTreeParser.g" |
| 1135 |
|
FragmentStamp* currFragmentStamp = new FragmentStamp(ival); blockStack.push(currFragmentStamp); |
| 1136 |
< |
#line 1131 "MDTreeParser.cpp" |
| 1136 |
> |
#line 1137 "MDTreeParser.cpp" |
| 1137 |
|
{ // ( ... )* |
| 1138 |
|
for (;;) { |
| 1139 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1143 |
|
_t = _retTree; |
| 1144 |
|
} |
| 1145 |
|
else { |
| 1146 |
< |
goto _loop84; |
| 1146 |
> |
goto _loop85; |
| 1147 |
|
} |
| 1148 |
|
|
| 1149 |
|
} |
| 1150 |
< |
_loop84:; |
| 1150 |
> |
_loop85:; |
| 1151 |
|
} // ( ... )* |
| 1152 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST tmp35_AST_in = _t; |
| 1153 |
|
match(_t,ENDBLOCK); |
| 1154 |
|
_t = _t->getNextSibling(); |
| 1155 |
< |
_t = __t82; |
| 1155 |
> |
_t = __t83; |
| 1156 |
|
_t = _t->getNextSibling(); |
| 1157 |
< |
#line 265 "MDTreeParser.g" |
| 1157 |
> |
#line 268 "MDTreeParser.g" |
| 1158 |
|
|
| 1159 |
|
blockStack.top()->validate(); |
| 1160 |
|
blockStack.pop(); |
| 1161 |
|
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 1162 |
|
currMoleculeStamp->addFragmentStamp(currFragmentStamp); |
| 1163 |
|
|
| 1164 |
< |
#line 1159 "MDTreeParser.cpp" |
| 1164 |
> |
#line 1165 "MDTreeParser.cpp" |
| 1165 |
|
} |
| 1166 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1167 |
|
reportError(ex); |
| 1171 |
|
_retTree = _t; |
| 1172 |
|
} |
| 1173 |
|
|
| 1174 |
+ |
void MDTreeParser::constraintblock(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1175 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST constraintblock_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1176 |
+ |
|
| 1177 |
+ |
try { // for error handling |
| 1178 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST __t88 = _t; |
| 1179 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp36_AST_in = _t; |
| 1180 |
+ |
match(_t,CONSTRAINT); |
| 1181 |
+ |
_t = _t->getFirstChild(); |
| 1182 |
+ |
#line 279 "MDTreeParser.g" |
| 1183 |
+ |
ConstraintStamp* currConstraintStamp = new ConstraintStamp(); blockStack.push(currConstraintStamp); |
| 1184 |
+ |
#line 1185 "MDTreeParser.cpp" |
| 1185 |
+ |
{ // ( ... )* |
| 1186 |
+ |
for (;;) { |
| 1187 |
+ |
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1188 |
+ |
_t = ASTNULL; |
| 1189 |
+ |
if ((_t->getType() == MEMBERS || _t->getType() == ASSIGNEQUAL)) { |
| 1190 |
+ |
constraintstatement(_t); |
| 1191 |
+ |
_t = _retTree; |
| 1192 |
+ |
} |
| 1193 |
+ |
else { |
| 1194 |
+ |
goto _loop90; |
| 1195 |
+ |
} |
| 1196 |
+ |
|
| 1197 |
+ |
} |
| 1198 |
+ |
_loop90:; |
| 1199 |
+ |
} // ( ... )* |
| 1200 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp37_AST_in = _t; |
| 1201 |
+ |
match(_t,ENDBLOCK); |
| 1202 |
+ |
_t = _t->getNextSibling(); |
| 1203 |
+ |
_t = __t88; |
| 1204 |
+ |
_t = _t->getNextSibling(); |
| 1205 |
+ |
#line 281 "MDTreeParser.g" |
| 1206 |
+ |
|
| 1207 |
+ |
blockStack.pop(); |
| 1208 |
+ |
MoleculeStamp* currMoleculeStamp = static_cast<MoleculeStamp*>(blockStack.top()); |
| 1209 |
+ |
currMoleculeStamp->addConstraintStamp(currConstraintStamp); |
| 1210 |
+ |
|
| 1211 |
+ |
#line 1212 "MDTreeParser.cpp" |
| 1212 |
+ |
} |
| 1213 |
+ |
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1214 |
+ |
reportError(ex); |
| 1215 |
+ |
if ( _t != ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1216 |
+ |
_t = _t->getNextSibling(); |
| 1217 |
+ |
} |
| 1218 |
+ |
_retTree = _t; |
| 1219 |
+ |
} |
| 1220 |
+ |
|
| 1221 |
|
void MDTreeParser::atomstatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1222 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST atomstatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1223 |
< |
#line 133 "MDTreeParser.g" |
| 1223 |
> |
#line 134 "MDTreeParser.g" |
| 1224 |
|
|
| 1225 |
|
vector<RealType> dvec; |
| 1226 |
|
AtomStamp* currAtomStamp = static_cast<AtomStamp*>(blockStack.top()); |
| 1227 |
|
|
| 1228 |
|
|
| 1229 |
< |
#line 1177 "MDTreeParser.cpp" |
| 1229 |
> |
#line 1230 "MDTreeParser.cpp" |
| 1230 |
|
|
| 1231 |
|
try { // for error handling |
| 1232 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1241 |
|
case POSITION: |
| 1242 |
|
{ |
| 1243 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST __t43 = _t; |
| 1244 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp36_AST_in = _t; |
| 1244 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp38_AST_in = _t; |
| 1245 |
|
match(_t,POSITION); |
| 1246 |
|
_t = _t->getFirstChild(); |
| 1247 |
|
dvec=doubleNumberTuple(_t); |
| 1248 |
|
_t = _retTree; |
| 1249 |
|
_t = __t43; |
| 1250 |
|
_t = _t->getNextSibling(); |
| 1251 |
< |
#line 140 "MDTreeParser.g" |
| 1251 |
> |
#line 141 "MDTreeParser.g" |
| 1252 |
|
currAtomStamp->setPosition(dvec); |
| 1253 |
< |
#line 1201 "MDTreeParser.cpp" |
| 1253 |
> |
#line 1254 "MDTreeParser.cpp" |
| 1254 |
|
break; |
| 1255 |
|
} |
| 1256 |
|
case ORIENTATION: |
| 1257 |
|
{ |
| 1258 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST __t44 = _t; |
| 1259 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp37_AST_in = _t; |
| 1259 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp39_AST_in = _t; |
| 1260 |
|
match(_t,ORIENTATION); |
| 1261 |
|
_t = _t->getFirstChild(); |
| 1262 |
|
dvec=doubleNumberTuple(_t); |
| 1263 |
|
_t = _retTree; |
| 1264 |
|
_t = __t44; |
| 1265 |
|
_t = _t->getNextSibling(); |
| 1266 |
< |
#line 141 "MDTreeParser.g" |
| 1266 |
> |
#line 142 "MDTreeParser.g" |
| 1267 |
|
currAtomStamp->setOrientation(dvec); |
| 1268 |
< |
#line 1216 "MDTreeParser.cpp" |
| 1268 |
> |
#line 1269 "MDTreeParser.cpp" |
| 1269 |
|
break; |
| 1270 |
|
} |
| 1271 |
|
default: |
| 1283 |
|
} |
| 1284 |
|
|
| 1285 |
|
vector<RealType> MDTreeParser::doubleNumberTuple(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1286 |
< |
#line 278 "MDTreeParser.g" |
| 1286 |
> |
#line 298 "MDTreeParser.g" |
| 1287 |
|
vector<RealType> dvec; |
| 1288 |
< |
#line 1236 "MDTreeParser.cpp" |
| 1288 |
> |
#line 1289 "MDTreeParser.cpp" |
| 1289 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST doubleNumberTuple_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1290 |
< |
#line 278 "MDTreeParser.g" |
| 1290 |
> |
#line 298 "MDTreeParser.g" |
| 1291 |
|
|
| 1292 |
|
RealType dval; |
| 1293 |
|
|
| 1294 |
< |
#line 1242 "MDTreeParser.cpp" |
| 1294 |
> |
#line 1295 "MDTreeParser.cpp" |
| 1295 |
|
|
| 1296 |
|
try { // for error handling |
| 1297 |
|
{ // ( ... )+ |
| 1298 |
< |
int _cnt88=0; |
| 1298 |
> |
int _cnt95=0; |
| 1299 |
|
for (;;) { |
| 1300 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1301 |
|
_t = ASTNULL; |
| 1302 |
|
if (((_t->getType() >= NUM_INT && _t->getType() <= NUM_DOUBLE))) { |
| 1303 |
|
dval=doubleNumber(_t); |
| 1304 |
|
_t = _retTree; |
| 1305 |
< |
#line 282 "MDTreeParser.g" |
| 1305 |
> |
#line 302 "MDTreeParser.g" |
| 1306 |
|
dvec.push_back(dval); |
| 1307 |
< |
#line 1255 "MDTreeParser.cpp" |
| 1307 |
> |
#line 1308 "MDTreeParser.cpp" |
| 1308 |
|
} |
| 1309 |
|
else { |
| 1310 |
< |
if ( _cnt88>=1 ) { goto _loop88; } else {throw ANTLR_USE_NAMESPACE(antlr)NoViableAltException(_t);} |
| 1310 |
> |
if ( _cnt95>=1 ) { goto _loop95; } else {throw ANTLR_USE_NAMESPACE(antlr)NoViableAltException(_t);} |
| 1311 |
|
} |
| 1312 |
|
|
| 1313 |
< |
_cnt88++; |
| 1313 |
> |
_cnt95++; |
| 1314 |
|
} |
| 1315 |
< |
_loop88:; |
| 1315 |
> |
_loop95:; |
| 1316 |
|
} // ( ... )+ |
| 1317 |
|
} |
| 1318 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1326 |
|
|
| 1327 |
|
void MDTreeParser::bondstatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1328 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST bondstatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1329 |
< |
#line 154 "MDTreeParser.g" |
| 1329 |
> |
#line 155 "MDTreeParser.g" |
| 1330 |
|
|
| 1331 |
|
vector<int> ivec; |
| 1332 |
|
BondStamp* currBondStamp = static_cast<BondStamp*>(blockStack.top()); |
| 1333 |
|
|
| 1334 |
< |
#line 1282 "MDTreeParser.cpp" |
| 1334 |
> |
#line 1335 "MDTreeParser.cpp" |
| 1335 |
|
|
| 1336 |
|
try { // for error handling |
| 1337 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1346 |
|
case MEMBERS: |
| 1347 |
|
{ |
| 1348 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST __t50 = _t; |
| 1349 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp38_AST_in = _t; |
| 1349 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp40_AST_in = _t; |
| 1350 |
|
match(_t,MEMBERS); |
| 1351 |
|
_t = _t->getFirstChild(); |
| 1352 |
|
ivec=inttuple(_t); |
| 1353 |
|
_t = _retTree; |
| 1354 |
|
_t = __t50; |
| 1355 |
|
_t = _t->getNextSibling(); |
| 1356 |
< |
#line 160 "MDTreeParser.g" |
| 1356 |
> |
#line 161 "MDTreeParser.g" |
| 1357 |
|
currBondStamp->setMembers(ivec); |
| 1358 |
< |
#line 1306 "MDTreeParser.cpp" |
| 1358 |
> |
#line 1359 "MDTreeParser.cpp" |
| 1359 |
|
break; |
| 1360 |
|
} |
| 1361 |
|
default: |
| 1373 |
|
} |
| 1374 |
|
|
| 1375 |
|
vector<int> MDTreeParser::inttuple(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1376 |
< |
#line 286 "MDTreeParser.g" |
| 1376 |
> |
#line 306 "MDTreeParser.g" |
| 1377 |
|
vector<int> ivec; |
| 1378 |
< |
#line 1326 "MDTreeParser.cpp" |
| 1378 |
> |
#line 1379 "MDTreeParser.cpp" |
| 1379 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST inttuple_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1380 |
< |
#line 286 "MDTreeParser.g" |
| 1380 |
> |
#line 306 "MDTreeParser.g" |
| 1381 |
|
|
| 1382 |
|
int ival; |
| 1383 |
|
|
| 1384 |
< |
#line 1332 "MDTreeParser.cpp" |
| 1384 |
> |
#line 1385 "MDTreeParser.cpp" |
| 1385 |
|
|
| 1386 |
|
try { // for error handling |
| 1387 |
|
{ // ( ... )+ |
| 1388 |
< |
int _cnt91=0; |
| 1388 |
> |
int _cnt98=0; |
| 1389 |
|
for (;;) { |
| 1390 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1391 |
|
_t = ASTNULL; |
| 1392 |
|
if ((_t->getType() == NUM_INT || _t->getType() == NUM_LONG)) { |
| 1393 |
|
ival=intConst(_t); |
| 1394 |
|
_t = _retTree; |
| 1395 |
< |
#line 290 "MDTreeParser.g" |
| 1395 |
> |
#line 310 "MDTreeParser.g" |
| 1396 |
|
ivec.push_back(ival); |
| 1397 |
< |
#line 1345 "MDTreeParser.cpp" |
| 1397 |
> |
#line 1398 "MDTreeParser.cpp" |
| 1398 |
|
} |
| 1399 |
|
else { |
| 1400 |
< |
if ( _cnt91>=1 ) { goto _loop91; } else {throw ANTLR_USE_NAMESPACE(antlr)NoViableAltException(_t);} |
| 1400 |
> |
if ( _cnt98>=1 ) { goto _loop98; } else {throw ANTLR_USE_NAMESPACE(antlr)NoViableAltException(_t);} |
| 1401 |
|
} |
| 1402 |
|
|
| 1403 |
< |
_cnt91++; |
| 1403 |
> |
_cnt98++; |
| 1404 |
|
} |
| 1405 |
< |
_loop91:; |
| 1405 |
> |
_loop98:; |
| 1406 |
|
} // ( ... )+ |
| 1407 |
|
} |
| 1408 |
|
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1416 |
|
|
| 1417 |
|
void MDTreeParser::bendstatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1418 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST bendstatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1419 |
< |
#line 173 "MDTreeParser.g" |
| 1419 |
> |
#line 174 "MDTreeParser.g" |
| 1420 |
|
|
| 1421 |
|
vector<int> ivec; |
| 1422 |
|
BendStamp* currBendStamp = static_cast<BendStamp*>(blockStack.top()); |
| 1423 |
|
|
| 1424 |
< |
#line 1372 "MDTreeParser.cpp" |
| 1424 |
> |
#line 1425 "MDTreeParser.cpp" |
| 1425 |
|
|
| 1426 |
|
try { // for error handling |
| 1427 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1436 |
|
case MEMBERS: |
| 1437 |
|
{ |
| 1438 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST __t56 = _t; |
| 1439 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp39_AST_in = _t; |
| 1439 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp41_AST_in = _t; |
| 1440 |
|
match(_t,MEMBERS); |
| 1441 |
|
_t = _t->getFirstChild(); |
| 1442 |
|
ivec=inttuple(_t); |
| 1443 |
|
_t = _retTree; |
| 1444 |
|
_t = __t56; |
| 1445 |
|
_t = _t->getNextSibling(); |
| 1446 |
< |
#line 179 "MDTreeParser.g" |
| 1446 |
> |
#line 180 "MDTreeParser.g" |
| 1447 |
|
currBendStamp->setMembers(ivec); |
| 1448 |
< |
#line 1396 "MDTreeParser.cpp" |
| 1448 |
> |
#line 1449 "MDTreeParser.cpp" |
| 1449 |
|
break; |
| 1450 |
|
} |
| 1451 |
|
default: |
| 1464 |
|
|
| 1465 |
|
void MDTreeParser::torsionstatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1466 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST torsionstatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1467 |
< |
#line 192 "MDTreeParser.g" |
| 1467 |
> |
#line 193 "MDTreeParser.g" |
| 1468 |
|
|
| 1469 |
|
vector<int> ivec; |
| 1470 |
|
TorsionStamp* currTorsionStamp = static_cast<TorsionStamp*>(blockStack.top()); |
| 1471 |
|
|
| 1472 |
< |
#line 1420 "MDTreeParser.cpp" |
| 1472 |
> |
#line 1473 "MDTreeParser.cpp" |
| 1473 |
|
|
| 1474 |
|
try { // for error handling |
| 1475 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1484 |
|
case MEMBERS: |
| 1485 |
|
{ |
| 1486 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST __t62 = _t; |
| 1487 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp40_AST_in = _t; |
| 1487 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp42_AST_in = _t; |
| 1488 |
|
match(_t,MEMBERS); |
| 1489 |
|
_t = _t->getFirstChild(); |
| 1490 |
|
ivec=inttuple(_t); |
| 1491 |
|
_t = _retTree; |
| 1492 |
|
_t = __t62; |
| 1493 |
|
_t = _t->getNextSibling(); |
| 1494 |
< |
#line 198 "MDTreeParser.g" |
| 1494 |
> |
#line 199 "MDTreeParser.g" |
| 1495 |
|
currTorsionStamp->setMembers(ivec); |
| 1496 |
< |
#line 1444 "MDTreeParser.cpp" |
| 1496 |
> |
#line 1497 "MDTreeParser.cpp" |
| 1497 |
|
break; |
| 1498 |
|
} |
| 1499 |
|
default: |
| 1512 |
|
|
| 1513 |
|
void MDTreeParser::inversionstatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1514 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST inversionstatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1515 |
< |
#line 211 "MDTreeParser.g" |
| 1515 |
> |
#line 212 "MDTreeParser.g" |
| 1516 |
|
|
| 1517 |
|
int icent; |
| 1518 |
+ |
vector<int> ivec; |
| 1519 |
|
InversionStamp* currInversionStamp = static_cast<InversionStamp*>(blockStack.top()); |
| 1520 |
|
|
| 1521 |
< |
#line 1468 "MDTreeParser.cpp" |
| 1521 |
> |
#line 1522 "MDTreeParser.cpp" |
| 1522 |
|
|
| 1523 |
|
try { // for error handling |
| 1524 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1533 |
|
case CENTER: |
| 1534 |
|
{ |
| 1535 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST __t68 = _t; |
| 1536 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp41_AST_in = _t; |
| 1536 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp43_AST_in = _t; |
| 1537 |
|
match(_t,CENTER); |
| 1538 |
|
_t = _t->getFirstChild(); |
| 1539 |
|
icent=intConst(_t); |
| 1540 |
|
_t = _retTree; |
| 1541 |
|
_t = __t68; |
| 1542 |
|
_t = _t->getNextSibling(); |
| 1543 |
< |
#line 217 "MDTreeParser.g" |
| 1543 |
> |
#line 219 "MDTreeParser.g" |
| 1544 |
|
currInversionStamp->setCenter(icent); |
| 1545 |
< |
#line 1492 "MDTreeParser.cpp" |
| 1545 |
> |
#line 1546 "MDTreeParser.cpp" |
| 1546 |
|
break; |
| 1547 |
|
} |
| 1548 |
+ |
case SATELLITES: |
| 1549 |
+ |
{ |
| 1550 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST __t69 = _t; |
| 1551 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp44_AST_in = _t; |
| 1552 |
+ |
match(_t,SATELLITES); |
| 1553 |
+ |
_t = _t->getFirstChild(); |
| 1554 |
+ |
ivec=inttuple(_t); |
| 1555 |
+ |
_t = _retTree; |
| 1556 |
+ |
_t = __t69; |
| 1557 |
+ |
_t = _t->getNextSibling(); |
| 1558 |
+ |
#line 220 "MDTreeParser.g" |
| 1559 |
+ |
currInversionStamp->setSatellites(ivec); |
| 1560 |
+ |
#line 1561 "MDTreeParser.cpp" |
| 1561 |
+ |
break; |
| 1562 |
+ |
} |
| 1563 |
|
default: |
| 1564 |
|
{ |
| 1565 |
|
throw ANTLR_USE_NAMESPACE(antlr)NoViableAltException(_t); |
| 1576 |
|
|
| 1577 |
|
void MDTreeParser::rigidbodystatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1578 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST rigidbodystatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1579 |
< |
#line 234 "MDTreeParser.g" |
| 1579 |
> |
#line 237 "MDTreeParser.g" |
| 1580 |
|
|
| 1581 |
|
vector<int> ivec; |
| 1582 |
|
RigidBodyStamp* currRigidBodyStamp = static_cast<RigidBodyStamp*>(blockStack.top()); |
| 1583 |
|
|
| 1584 |
< |
#line 1516 "MDTreeParser.cpp" |
| 1584 |
> |
#line 1585 "MDTreeParser.cpp" |
| 1585 |
|
|
| 1586 |
|
try { // for error handling |
| 1587 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1595 |
|
} |
| 1596 |
|
case MEMBERS: |
| 1597 |
|
{ |
| 1598 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST __t74 = _t; |
| 1599 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp42_AST_in = _t; |
| 1598 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST __t75 = _t; |
| 1599 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp45_AST_in = _t; |
| 1600 |
|
match(_t,MEMBERS); |
| 1601 |
|
_t = _t->getFirstChild(); |
| 1602 |
|
ivec=inttuple(_t); |
| 1603 |
|
_t = _retTree; |
| 1604 |
< |
_t = __t74; |
| 1604 |
> |
_t = __t75; |
| 1605 |
|
_t = _t->getNextSibling(); |
| 1606 |
< |
#line 240 "MDTreeParser.g" |
| 1606 |
> |
#line 243 "MDTreeParser.g" |
| 1607 |
|
currRigidBodyStamp->setMembers(ivec); |
| 1608 |
< |
#line 1540 "MDTreeParser.cpp" |
| 1608 |
> |
#line 1609 "MDTreeParser.cpp" |
| 1609 |
|
break; |
| 1610 |
|
} |
| 1611 |
|
default: |
| 1624 |
|
|
| 1625 |
|
void MDTreeParser::cutoffgroupstatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1626 |
|
ANTLR_USE_NAMESPACE(antlr)RefAST cutoffgroupstatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1627 |
< |
#line 253 "MDTreeParser.g" |
| 1627 |
> |
#line 256 "MDTreeParser.g" |
| 1628 |
|
|
| 1629 |
|
vector<int> ivec; |
| 1630 |
|
CutoffGroupStamp* currCutoffGroupStamp = static_cast<CutoffGroupStamp*>(blockStack.top()); |
| 1631 |
|
|
| 1632 |
< |
#line 1564 "MDTreeParser.cpp" |
| 1632 |
> |
#line 1633 "MDTreeParser.cpp" |
| 1633 |
|
|
| 1634 |
|
try { // for error handling |
| 1635 |
|
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1643 |
|
} |
| 1644 |
|
case MEMBERS: |
| 1645 |
|
{ |
| 1646 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST __t80 = _t; |
| 1647 |
< |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp43_AST_in = _t; |
| 1646 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST __t81 = _t; |
| 1647 |
> |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp46_AST_in = _t; |
| 1648 |
|
match(_t,MEMBERS); |
| 1649 |
|
_t = _t->getFirstChild(); |
| 1650 |
|
ivec=inttuple(_t); |
| 1651 |
|
_t = _retTree; |
| 1652 |
< |
_t = __t80; |
| 1652 |
> |
_t = __t81; |
| 1653 |
|
_t = _t->getNextSibling(); |
| 1654 |
< |
#line 259 "MDTreeParser.g" |
| 1654 |
> |
#line 262 "MDTreeParser.g" |
| 1655 |
|
currCutoffGroupStamp->setMembers(ivec); |
| 1656 |
< |
#line 1588 "MDTreeParser.cpp" |
| 1656 |
> |
#line 1657 "MDTreeParser.cpp" |
| 1657 |
|
break; |
| 1658 |
|
} |
| 1659 |
|
default: |
| 1685 |
|
_retTree = _t; |
| 1686 |
|
} |
| 1687 |
|
|
| 1688 |
+ |
void MDTreeParser::constraintstatement(ANTLR_USE_NAMESPACE(antlr)RefAST _t) { |
| 1689 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST constraintstatement_AST_in = (_t == ANTLR_USE_NAMESPACE(antlr)RefAST(ASTNULL)) ? ANTLR_USE_NAMESPACE(antlr)nullAST : _t; |
| 1690 |
+ |
#line 288 "MDTreeParser.g" |
| 1691 |
+ |
|
| 1692 |
+ |
vector<int> ivec; |
| 1693 |
+ |
ConstraintStamp* currConstraintStamp = static_cast<ConstraintStamp*>(blockStack.top()); |
| 1694 |
+ |
|
| 1695 |
+ |
#line 1696 "MDTreeParser.cpp" |
| 1696 |
+ |
|
| 1697 |
+ |
try { // for error handling |
| 1698 |
+ |
if (_t == ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1699 |
+ |
_t = ASTNULL; |
| 1700 |
+ |
switch ( _t->getType()) { |
| 1701 |
+ |
case ASSIGNEQUAL: |
| 1702 |
+ |
{ |
| 1703 |
+ |
assignment(_t); |
| 1704 |
+ |
_t = _retTree; |
| 1705 |
+ |
break; |
| 1706 |
+ |
} |
| 1707 |
+ |
case MEMBERS: |
| 1708 |
+ |
{ |
| 1709 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST __t92 = _t; |
| 1710 |
+ |
ANTLR_USE_NAMESPACE(antlr)RefAST tmp47_AST_in = _t; |
| 1711 |
+ |
match(_t,MEMBERS); |
| 1712 |
+ |
_t = _t->getFirstChild(); |
| 1713 |
+ |
ivec=inttuple(_t); |
| 1714 |
+ |
_t = _retTree; |
| 1715 |
+ |
_t = __t92; |
| 1716 |
+ |
_t = _t->getNextSibling(); |
| 1717 |
+ |
#line 294 "MDTreeParser.g" |
| 1718 |
+ |
currConstraintStamp->setMembers(ivec); |
| 1719 |
+ |
#line 1720 "MDTreeParser.cpp" |
| 1720 |
+ |
break; |
| 1721 |
+ |
} |
| 1722 |
+ |
default: |
| 1723 |
+ |
{ |
| 1724 |
+ |
throw ANTLR_USE_NAMESPACE(antlr)NoViableAltException(_t); |
| 1725 |
+ |
} |
| 1726 |
+ |
} |
| 1727 |
+ |
} |
| 1728 |
+ |
catch (ANTLR_USE_NAMESPACE(antlr)RecognitionException& ex) { |
| 1729 |
+ |
reportError(ex); |
| 1730 |
+ |
if ( _t != ANTLR_USE_NAMESPACE(antlr)nullAST ) |
| 1731 |
+ |
_t = _t->getNextSibling(); |
| 1732 |
+ |
} |
| 1733 |
+ |
_retTree = _t; |
| 1734 |
+ |
} |
| 1735 |
+ |
|
| 1736 |
|
void MDTreeParser::initializeASTFactory( ANTLR_USE_NAMESPACE(antlr)ASTFactory& ) |
| 1737 |
|
{ |
| 1738 |
|
} |
| 1752 |
|
"\"inversion\"", |
| 1753 |
|
"\"rigidBody\"", |
| 1754 |
|
"\"cutoffGroup\"", |
| 1755 |
+ |
"\"constraint\"", |
| 1756 |
+ |
"\"distance\"", |
| 1757 |
|
"\"fragment\"", |
| 1758 |
|
"\"members\"", |
| 1759 |
|
"\"center\"", |
| 1760 |
+ |
"\"satellites\"", |
| 1761 |
|
"\"position\"", |
| 1762 |
|
"\"orientation\"", |
| 1763 |
|
"\"flucQ\"", |
| 1800 |
|
0 |
| 1801 |
|
}; |
| 1802 |
|
|
| 1803 |
< |
const unsigned long MDTreeParser::_tokenSet_0_data_[] = { 40894704UL, 0UL, 0UL, 0UL }; |
| 1803 |
> |
const unsigned long MDTreeParser::_tokenSet_0_data_[] = { 327155952UL, 0UL, 0UL, 0UL }; |
| 1804 |
|
// "component" "molecule" "zconstraint" "restraint" "flucQ" "RNEMD" "minimizer" |
| 1805 |
|
// ASSIGNEQUAL |
| 1806 |
|
const ANTLR_USE_NAMESPACE(antlr)BitSet MDTreeParser::_tokenSet_0(_tokenSet_0_data_,4); |
| 1807 |
< |
const unsigned long MDTreeParser::_tokenSet_1_data_[] = { 33619712UL, 0UL, 0UL, 0UL }; |
| 1807 |
> |
const unsigned long MDTreeParser::_tokenSet_1_data_[] = { 268631808UL, 0UL, 0UL, 0UL }; |
| 1808 |
|
// "atom" "bond" "bend" "torsion" "inversion" "rigidBody" "cutoffGroup" |
| 1809 |
< |
// "fragment" ASSIGNEQUAL |
| 1809 |
> |
// "constraint" "fragment" ASSIGNEQUAL |
| 1810 |
|
const ANTLR_USE_NAMESPACE(antlr)BitSet MDTreeParser::_tokenSet_1(_tokenSet_1_data_,4); |
| 1811 |
|
|
| 1812 |
|
|