| 1 | /********************************************************************** | 
| 2 | Copyright (C) 2000 by OpenEye Scientific Software, Inc. | 
| 3 | Some portions Copyright (C) 2001-2005 by Geoffrey R. Hutchison | 
| 4 | Some portions Copyright (C) 2004 by Chris Morley | 
| 5 |  | 
| 6 | This program is free software; you can redistribute it and/or modify | 
| 7 | it under the terms of the GNU General Public License as published by | 
| 8 | the Free Software Foundation version 2 of the License. | 
| 9 |  | 
| 10 | This program is distributed in the hope that it will be useful, | 
| 11 | but WITHOUT ANY WARRANTY; without even the implied warranty of | 
| 12 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
| 13 | GNU General Public License for more details. | 
| 14 | ***********************************************************************/ | 
| 15 | #ifndef OB_XYZFORMAT_HPP | 
| 16 | #define OB_XYZFORMAT_HPP | 
| 17 |  | 
| 18 | #include "mol.hpp" | 
| 19 | #include "obconversion.hpp" | 
| 20 | #include "obmolecformat.hpp" | 
| 21 |  | 
| 22 | #ifdef HAVE_SSTREAM | 
| 23 | #include <sstream> | 
| 24 | #else | 
| 25 | #include <strstream> | 
| 26 | #endif | 
| 27 |  | 
| 28 | using namespace std; | 
| 29 | namespace OpenBabel | 
| 30 | { | 
| 31 |  | 
| 32 | class XYZFormat : public OBMoleculeFormat | 
| 33 | { | 
| 34 | public: | 
| 35 | //Register this format type ID | 
| 36 | XYZFormat() | 
| 37 | { | 
| 38 | OBConversion::RegisterFormat("xyz", this, "chemical/x-xyz"); | 
| 39 | } | 
| 40 |  | 
| 41 | virtual const char* Description() //required | 
| 42 | { | 
| 43 | return | 
| 44 | "XYZ cartesian coordinates format\n \ | 
| 45 | Read Options e.g. -as\n\ | 
| 46 | s  Output single bonds only\n\ | 
| 47 | b  Disable bonding entirely\n\n"; | 
| 48 | }; | 
| 49 |  | 
| 50 | virtual const char* SpecificationURL() | 
| 51 | {return "http://openbabel.sourceforge.net/formats/xyz.shtml";}; //optional | 
| 52 |  | 
| 53 | virtual const char* GetMIMEType() | 
| 54 | { return "chemical/x-xyz"; }; | 
| 55 |  | 
| 56 | //*** This section identical for most OBMol conversions *** | 
| 57 | //////////////////////////////////////////////////// | 
| 58 | /// The "API" interface functions | 
| 59 | virtual bool ReadMolecule(OBBase* pOb, OBConversion* pConv); | 
| 60 | virtual bool WriteMolecule(OBBase* pOb, OBConversion* pConv); | 
| 61 | }; | 
| 62 |  | 
| 63 | } | 
| 64 |  | 
| 65 | #endif |