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root/OpenMD/trunk/src/parallel/Communicator.hpp
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Comparing:
branches/development/src/parallel/Communicator.hpp (file contents), Revision 1593 by gezelter, Fri Jul 15 21:35:14 2011 UTC vs.
trunk/src/parallel/Communicator.hpp (file contents), Revision 1796 by gezelter, Mon Sep 10 18:38:44 2012 UTC

# Line 43 | Line 43
43   * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005).            
44   * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006).          
45   * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008).          
46 < * [4]  Vardeman & Gezelter, in progress (2009).                        
46 > * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010).
47 > * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011).
48   */
49  
50   #ifndef PARALLEL_COMMUNICATOR_HPP
# Line 71 | Line 72 | namespace OpenMD{
72      static int Length() { return 1; };
73    };
74    
75 <  template<> inline MPI::Datatype MPITraits<int>::Type() { return MPI_INT; }
76 <  template<> inline MPI::Datatype MPITraits<RealType>::Type() { return MPI_REALTYPE; }
75 >  template<> inline MPI::Datatype MPITraits<int>::Type() { return MPI::INT; }
76 >  template<> inline MPI::Datatype MPITraits<RealType>::Type() { return MPI::REALTYPE; }
77  
78    template<class T, unsigned int Dim>
79    class MPITraits< Vector<T, Dim> > {
# Line 119 | Line 120 | namespace OpenMD{
120          if (nProc % i == 0) nColumns = i;        
121        }
122          
122 –      int nRows = nProc / nColumns;
123        rowIndex_ = myRank / nColumns;      
124        columnIndex_ = myRank % nColumns;
125  
126 –      cerr << "rowIndex = " << rowIndex_ << "\t colIndex = " << columnIndex_ << "\n";
126        switch(D) {
127        case Row :
128          myComm = MPI::COMM_WORLD.Split(rowIndex_, 0);

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