[ViewVC] Diff of: OpenMD/trunk/src/parallel/ForceMatrixDecomposition.hpp

Comparing branches/development/src/parallel/ForceMatrixDecomposition.hpp (file contents):
Revision 1549 by gezelter, Wed Apr 27 18:38:15 2011 UTC vs.
Revision 1567 by gezelter, Tue May 24 21:24:45 2011 UTC

#	Line 42 \| Line 42
42		#ifndef PARALLEL_FORCEMATRIXDECOMPOSITION_HPP
43		#define PARALLEL_FORCEMATRIXDECOMPOSITION_HPP
44
45	<	#include "Parallel/ForceDecomposition.hpp"
45	>	#include "parallel/ForceDecomposition.hpp"
46		#include "math/SquareMatrix3.hpp"
47	+	#include "brains/Snapshot.hpp"
48
49		#ifdef IS_MPI
50	<	#include "Parallel/Communicator.hpp"
50	>	#include "parallel/Communicator.hpp"
51		#endif
52
53		using namespace std;
#	Line 94 \| Line 95 \| namespace OpenMD {
95
96		private:
97		SnapshotManager* sman_;
98	+	Snapshot* snap_;
99	+	int storageLayout_;
100	+	vector<Vector3i> Cells;
101	+
102	+	int nLocal_;
103	+	int nGroups_;
104	+
105		#ifdef IS_MPI
106	+	DataStorage atomRowData;
107	+	DataStorage atomColData;
108	+	DataStorage cgRowData;
109	+	DataStorage cgColData;
110	+
111	+	int nAtomsInRow_;
112	+	int nAtomsInCol_;
113	+	int nGroupsInRow_;
114	+	int nGroupsInCol_;
115	+
116		Communicator<Row, int>* AtomCommIntRow;
117		Communicator<Row, RealType>* AtomCommRealRow;
118		Communicator<Row, Vector3d>* AtomCommVectorRow;
#	Line 121 \| Line 139 \| namespace OpenMD {
139		vector<int> cgLocalToGlobal;
140		vector<int> cgRowToGlobal;
141		vector<int> cgColToGlobal;
142	+
143	+	vector<vector<int> > CellListRow;
144	+	vector<vector<int> > CellListCol;
145	+	#else
146	+	vector<vector<int> > CellList;
147		#endif
148		vector<RealType> pot_local;
149	+
150		};
151
152		}

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