src/selection/SelectionCompiler.hpp

/*
 * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
 *
 * The University of Notre Dame grants you ("Licensee") a
 * non-exclusive, royalty free, license to use, modify and
 * redistribute this software in source and binary code form, provided
 * that the following conditions are met:
 *
 * 1. Acknowledgement of the program authors must be made in any
 *    publication of scientific results based in part on use of the
 *    program.  An acceptable form of acknowledgement is citation of
 *    the article in which the program was described (Matthew
 *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
 *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
 *    Parallel Simulation Engine for Molecular Dynamics,"
 *    J. Comput. Chem. 26, pp. 252-271 (2005))
 *
 * 2. Redistributions of source code must retain the above copyright
 *    notice, this list of conditions and the following disclaimer.
 *
 * 3. Redistributions in binary form must reproduce the above copyright
 *    notice, this list of conditions and the following disclaimer in the
 *    documentation and/or other materials provided with the
 *    distribution.
 *
 * This software is provided "AS IS," without a warranty of any
 * kind. All express or implied conditions, representations and
 * warranties, including any implied warranty of merchantability,
 * fitness for a particular purpose or non-infringement, are hereby
 * excluded.  The University of Notre Dame and its licensors shall not
 * be liable for any damages suffered by licensee as a result of
 * using, modifying or distributing the software or its
 * derivatives. In no event will the University of Notre Dame or its
 * licensors be liable for any lost revenue, profit or data, or for
 * direct, indirect, special, consequential, incidental or punitive
 * damages, however caused and regardless of the theory of liability,
 * arising out of the use of or inability to use software, even if the
 * University of Notre Dame has been advised of the possibility of
 * such damages.
 */

#ifndef SELECTION_SELECTIONCOMPILER_HPP
#define SELECTION_SELECTIONCOMPILER_HPP
#include <string>
#include <vector>
namespace oopse {


/**
 * @class SelectionCompiler SelectionCompiler.hpp "selection/SelectionCompiler.hpp"
 * @brief compile a selection script to tokens
 * @todo document
 * <pre>

    expression       :: = clauseOr

    clauseOr         ::= clauseAnd {OR clauseAnd}*

    clauseAnd        ::= clauseNot {AND clauseNot}*

    clauseNot        ::= NOT clauseNot | clausePrimitive

    clausePrimitive  ::= clauseComparator |
                         clauseWithin |
                         clauseChemObject |
                         none | all |
                         ( clauseOr )

    clauseComparator ::= atomproperty comparatorop integer

    clauseWithin     ::= WITHIN ( clauseDistance , expression )

    clauseDistance   ::= integer | decimal
    
    clauseChemObject::= {clauseMolecule} | {clauseStuntDouble}

    clauseMolecule ::= {clauseMolName} | {clauseMolIndex}

    clauseMolName ::= molname clauseName
    
    clauseName::= *|string

    clauseMolIndex ::= molindex clauseIndex
    
    clauseIndex ::= integer {- integer }
    
    clauseStuntDouble ::= {clauseStuntDoubleName} | {clauseStuntDoubleIndex}

    clauseStuntDoubleName ::= name clauseName

    clauseStuntDoubleIndex ::= index clauseIndex

 * </pre>
 */
class SelectionCompiler{
    public:
        bool compile(const std::string& filename, const std::string& script );
        

        std::vector<int> getLineNumbers() {
            return lineNumbers;
        }

        std::vector<int> getLineIndices() {
            return lineIndices;
        }

        std::vector<std::vector<Token> > getAatokenCompiled() {
            return aatokenCompiled;
        }

        std::string getErrorMessage() {
            std::string strError = errorMessage;
            strError += " : " + errorLine + "\n";

            if (!filename.empty()) {
                strError += filename;
            }

            strError += " line#" + lineCurrent;
            return strError;
        }

        
    private:

        bool internalcompile();


        bool lookingAtLeadingWhitespace();
        bool lookingAtComment();
        bool lookingAtEndOfLine();
        bool lookingAtEndOfStatement();
        bool lookingAtString();


        bool compileCommand(const std::vector<vector>&);
        
        bool clauseOr();
        bool clauseAnd();
        bool clauseNot();
        bool clausePrimitive();
        bool clauseWithin();
        bool clauseComparator();
        bool clauseChemObject();
        bool clauseMolecule();
        bool clauseMolName();
        bool clauseMolIndex();
        bool clauseName();
        bool clauseIndex();
        bool clauseStuntDoubleName();
        bool clauseStuntDoubleIndex();

        bool compileError(const std::string& errorMessage) {
            std::cerr << "SelectionCompiler Error: " << errorMessage <<  << std::endl;
            error = true;
            this.errorMessage = errorMessage;
            return false;
        }
        
        bool commandExpected() {
            return compileError("command expected");
        }

        bool invalidExpressionToken(const std::string& ident) {
            return compileError("invalid expression token:" + ident);
        }

        bool unrecognizedToken() {
            return compileError("unrecognized token");
        }

        bool badArgumentCount() {
            return compileError("bad argument count");
        }

        bool endOfExpressionExpected() {
            return compileError("end of expression expected");
        }

        bool leftParenthesisExpected() {
            return compileError("left parenthesis expected");
        }

        bool rightParenthesisExpected() {
            return compileError("right parenthesis expected");
        }

        bool commaExpected() {
            return compileError("comma expected");
        }

        bool unrecognizedExpressionToken() {
            return compileError("unrecognized expression token:" + valuePeek());
        }

        bool comparisonOperatorExpected() {
            return compileError("comparison operator expected");
        }

        bool integerExpected() {
            return compileError("integer expected");
        }        
        
        
        std::string filename;
        std::string script;

        std::vector<int> lineNumbers;
        std::vector<int> lineIndices;
        std::vector<std::vector<Token> >aatokenCompiled;

        bool error;
        std::string errorMessage;
        std::string errorLine;

        int cchScript;
        short lineCurrent;

        int ichToken;
        int cchToken;
        std::vector<Token> atokenCommand;

        int ichCurrentCommand;

        std::vector<Token> ltokenPostfix;
        std::vector<Token> atokenInfix;
        int itokenInfix;

        //std::vector<Token> compiledTokens_;
};

}
#endif

Revision:	278
Committed:	Tue Feb 1 22:49:23 2005 UTC (20 years, 8 months ago) by tim
File size:	7040 byte(s)
Log Message:	Selection in progress
#	User	Rev	Content
1	tim	277	/*
2			* Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
3			*
4			* The University of Notre Dame grants you ("Licensee") a
5			* non-exclusive, royalty free, license to use, modify and
6			* redistribute this software in source and binary code form, provided
7			* that the following conditions are met:
8			*
9			* 1. Acknowledgement of the program authors must be made in any
10			* publication of scientific results based in part on use of the
11			* program. An acceptable form of acknowledgement is citation of
12			* the article in which the program was described (Matthew
13			* A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14			* J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15			* Parallel Simulation Engine for Molecular Dynamics,"
16			* J. Comput. Chem. 26, pp. 252-271 (2005))
17			*
18			* 2. Redistributions of source code must retain the above copyright
19			* notice, this list of conditions and the following disclaimer.
20			*
21			* 3. Redistributions in binary form must reproduce the above copyright
22			* notice, this list of conditions and the following disclaimer in the
23			* documentation and/or other materials provided with the
24			* distribution.
25			*
26			* This software is provided "AS IS," without a warranty of any
27			* kind. All express or implied conditions, representations and
28			* warranties, including any implied warranty of merchantability,
29			* fitness for a particular purpose or non-infringement, are hereby
30			* excluded. The University of Notre Dame and its licensors shall not
31			* be liable for any damages suffered by licensee as a result of
32			* using, modifying or distributing the software or its
33			* derivatives. In no event will the University of Notre Dame or its
34			* licensors be liable for any lost revenue, profit or data, or for
35			* direct, indirect, special, consequential, incidental or punitive
36			* damages, however caused and regardless of the theory of liability,
37			* arising out of the use of or inability to use software, even if the
38			* University of Notre Dame has been advised of the possibility of
39			* such damages.
40			*/
41
42			#ifndef SELECTION_SELECTIONCOMPILER_HPP
43			#define SELECTION_SELECTIONCOMPILER_HPP
44	tim	278	#include <string>
45	tim	277	#include <vector>
46			namespace oopse {
47
48
49			/**
50			* @class SelectionCompiler SelectionCompiler.hpp "selection/SelectionCompiler.hpp"
51			* @brief compile a selection script to tokens
52	tim	278	* @todo document
53	tim	277	* <pre>
54
55			expression :: = clauseOr
56
57			clauseOr ::= clauseAnd {OR clauseAnd}*
58
59			clauseAnd ::= clauseNot {AND clauseNot}*
60
61			clauseNot ::= NOT clauseNot \| clausePrimitive
62
63			clausePrimitive ::= clauseComparator \|
64			clauseWithin \|
65	tim	278	clauseChemObject \|
66	tim	277	none \| all \|
67			( clauseOr )
68
69			clauseComparator ::= atomproperty comparatorop integer
70
71			clauseWithin ::= WITHIN ( clauseDistance , expression )
72
73			clauseDistance ::= integer \| decimal
74	tim	278
75			clauseChemObject::= {clauseMolecule} \| {clauseStuntDouble}
76	tim	277
77	tim	278	clauseMolecule ::= {clauseMolName} \| {clauseMolIndex}
78
79			clauseMolName ::= molname clauseName
80	tim	277
81	tim	278	clauseName::= *\|string
82	tim	277
83	tim	278	clauseMolIndex ::= molindex clauseIndex
84
85			clauseIndex ::= integer {- integer }
86
87			clauseStuntDouble ::= {clauseStuntDoubleName} \| {clauseStuntDoubleIndex}
88	tim	277
89	tim	278	clauseStuntDoubleName ::= name clauseName
90	tim	277
91	tim	278	clauseStuntDoubleIndex ::= index clauseIndex
92	tim	277
93	tim	278	* </pre>
94			*/
95			class SelectionCompiler{
96			public:
97			bool compile(const std::string& filename, const std::string& script );
98
99	tim	277
100	tim	278	std::vector<int> getLineNumbers() {
101			return lineNumbers;
102			}
103	tim	277
104	tim	278	std::vector<int> getLineIndices() {
105			return lineIndices;
106			}
107	tim	277
108	tim	278	std::vector<std::vector<Token> > getAatokenCompiled() {
109			return aatokenCompiled;
110			}
111	tim	277
112	tim	278	std::string getErrorMessage() {
113			std::string strError = errorMessage;
114			strError += " : " + errorLine + "\n";
115	tim	277
116	tim	278	if (!filename.empty()) {
117			strError += filename;
118			}
119	tim	277
120	tim	278	strError += " line#" + lineCurrent;
121			return strError;
122			}
123	tim	277
124	tim	278
125	tim	277	private:
126
127	tim	278	bool internalcompile();
128
129
130			bool lookingAtLeadingWhitespace();
131			bool lookingAtComment();
132			bool lookingAtEndOfLine();
133			bool lookingAtEndOfStatement();
134			bool lookingAtString();
135
136
137			bool compileCommand(const std::vector<vector>&);
138
139	tim	277	bool clauseOr();
140			bool clauseAnd();
141			bool clauseNot();
142			bool clausePrimitive();
143			bool clauseWithin();
144			bool clauseComparator();
145	tim	278	bool clauseChemObject();
146			bool clauseMolecule();
147			bool clauseMolName();
148			bool clauseMolIndex();
149			bool clauseName();
150			bool clauseIndex();
151			bool clauseStuntDoubleName();
152			bool clauseStuntDoubleIndex();
153
154			bool compileError(const std::string& errorMessage) {
155			std::cerr << "SelectionCompiler Error: " << errorMessage << << std::endl;
156			error = true;
157			this.errorMessage = errorMessage;
158			return false;
159			}
160	tim	277
161	tim	278	bool commandExpected() {
162			return compileError("command expected");
163			}
164	tim	277
165	tim	278	bool invalidExpressionToken(const std::string& ident) {
166			return compileError("invalid expression token:" + ident);
167			}
168
169			bool unrecognizedToken() {
170			return compileError("unrecognized token");
171			}
172
173			bool badArgumentCount() {
174			return compileError("bad argument count");
175			}
176
177			bool endOfExpressionExpected() {
178			return compileError("end of expression expected");
179			}
180
181			bool leftParenthesisExpected() {
182			return compileError("left parenthesis expected");
183			}
184
185			bool rightParenthesisExpected() {
186			return compileError("right parenthesis expected");
187			}
188
189			bool commaExpected() {
190			return compileError("comma expected");
191			}
192
193			bool unrecognizedExpressionToken() {
194			return compileError("unrecognized expression token:" + valuePeek());
195			}
196
197			bool comparisonOperatorExpected() {
198			return compileError("comparison operator expected");
199			}
200
201			bool integerExpected() {
202			return compileError("integer expected");
203			}
204
205
206			std::string filename;
207			std::string script;
208
209			std::vector<int> lineNumbers;
210			std::vector<int> lineIndices;
211			std::vector<std::vector<Token> >aatokenCompiled;
212
213			bool error;
214			std::string errorMessage;
215			std::string errorLine;
216
217			int cchScript;
218			short lineCurrent;
219
220			int ichToken;
221			int cchToken;
222			std::vector<Token> atokenCommand;
223
224			int ichCurrentCommand;
225
226			std::vector<Token> ltokenPostfix;
227			std::vector<Token> atokenInfix;
228			int itokenInfix;
229
230			//std::vector<Token> compiledTokens_;
231	tim	277	};
232
233			}
234			#endif
235	tim	278