| 45 |  | #include <map> | 
| 46 |  | #include <string> | 
| 47 |  | #include <vector> | 
| 48 | + | #include <fstream> | 
| 49 |  |  | 
| 50 |  | #include "brains/SimInfo.hpp" | 
| 51 | < | #include "selection/Token.hpp" | 
| 51 | > | #include "selection/SelectionToken.hpp" | 
| 52 |  | #include "selection/SelectionCompiler.hpp" | 
| 53 |  | #include "selection/NameFinder.hpp" | 
| 54 | < | #include "utils/BitSet.hpp" | 
| 54 | > | #include "selection/DistanceFinder.hpp" | 
| 55 | > | #include "selection/IndexFinder.hpp" | 
| 56 | > | #include "utils/OOPSEBitSet.hpp" | 
| 57 |  | #include "primitives/StuntDouble.hpp" | 
| 58 | + | #include "utils/StringUtils.hpp" | 
| 59 |  | namespace oopse { | 
| 60 |  |  | 
| 61 |  |  | 
| 62 | < | //class Context { | 
| 63 | < | //    public: | 
| 64 | < | // | 
| 65 | < | //        void clear() { | 
| 66 | < | //            linenumbers.clear(); | 
| 67 | < | //            lineIndices.clear(); | 
| 64 | < | //            aatoken.clear(); | 
| 65 | < | //        } | 
| 66 | < | // | 
| 67 | < | //        std::string filename; | 
| 68 | < | //        std::string script; | 
| 69 | < | //        std::vector<int> linenumbers; | 
| 70 | < | //        std::vector<int> lineIndices; | 
| 71 | < | //        std::vector<std::vector<Token> > aatoken; | 
| 72 | < | //        int pc; | 
| 73 | < | //}; | 
| 62 | > | /** | 
| 63 | > | * @class SelectionEvaluator SelectionEvaluator.hpp "selection/SelectionEvaluator" | 
| 64 | > | * @brief Evalute the tokens compiled by SelectionCompiler and return a OOPSEBitSet | 
| 65 | > | */ | 
| 66 | > | class SelectionEvaluator{ | 
| 67 | > | public: | 
| 68 |  |  | 
| 69 | + | SelectionEvaluator(SimInfo* info); | 
| 70 |  |  | 
| 76 | – | /** | 
| 77 | – | * @class SelectionEvaluator SelectionEvaluator.hpp "selection/SelectionEvaluator" | 
| 78 | – | * @brief Evalute the tokens compiled by SelectionCompiler and return a BitSet | 
| 79 | – | */ | 
| 80 | – | class SelectionEvaluator{ | 
| 81 | – | public: | 
| 71 |  |  | 
| 72 | < | SelectionEvaluator(SimInfo* info); | 
| 73 | < |  | 
| 85 | < |  | 
| 86 | < | bool loadScriptString(const std::string& script); | 
| 87 | < | bool loadScriptFile(const std::string& filename); | 
| 72 | > | bool loadScriptString(const std::string& script); | 
| 73 | > | bool loadScriptFile(const std::string& filename); | 
| 74 |  |  | 
| 75 | < | BitSet evaluate(); | 
| 75 | > | OOPSEBitSet evaluate(); | 
| 76 |  |  | 
| 77 | < | //BitSet evaluate(Snapshot* snapshot); | 
| 77 | > | /** | 
| 78 | > | * Tests if the result from evaluation of script is dynamic. | 
| 79 | > | */ | 
| 80 | > | bool isDynamic() { | 
| 81 | > | return isDynamic_; | 
| 82 | > | } | 
| 83 |  |  | 
| 84 | < | /** | 
| 85 | < | * Tests if the result from evaluation of script is dynamic. | 
| 86 | < | */ | 
| 96 | < | bool isDynamic() { | 
| 97 | < | return isDynamic_; | 
| 98 | < | } | 
| 84 | > | bool hadRuntimeError() const{ | 
| 85 | > | return error; | 
| 86 | > | } | 
| 87 |  |  | 
| 88 | < | bool hadRuntimeError() const{ | 
| 89 | < | return error; | 
| 90 | < | } | 
| 88 | > | std::string getErrorMessage() const { | 
| 89 | > | return errorMessage; | 
| 90 | > | } | 
| 91 |  |  | 
| 104 | – | std::string getErrorMessage() const { | 
| 105 | – | return errorMessage; | 
| 106 | – | } | 
| 92 |  |  | 
| 93 | + | int getLinenumber() { | 
| 94 | + | return linenumbers[pc]; | 
| 95 | + | } | 
| 96 |  |  | 
| 97 | < | int getLinenumber() { | 
| 98 | < | return linenumbers[pc]; | 
| 99 | < | } | 
| 100 | < |  | 
| 101 | < | std::string getLine() { | 
| 102 | < | int ichBegin = lineIndices[pc]; | 
| 103 | < | int ichEnd; | 
| 104 | < | if ((ichEnd = script.find('\r', ichBegin)) == std::string::npos && | 
| 105 | < | (ichEnd = script.find('\n', ichBegin)) == std::string::npos) { | 
| 118 | < | ichEnd = script.size(); | 
| 119 | < | } | 
| 120 | < | return script.substr(ichBegin, ichEnd); | 
| 121 | < | } | 
| 97 | > | std::string getLine() { | 
| 98 | > | int ichBegin = lineIndices[pc]; | 
| 99 | > | int ichEnd; | 
| 100 | > | if ((ichEnd = script.find('\r', ichBegin)) == std::string::npos && | 
| 101 | > | (ichEnd = script.find('\n', ichBegin)) == std::string::npos) { | 
| 102 | > | ichEnd = script.size(); | 
| 103 | > | } | 
| 104 | > | return script.substr(ichBegin, ichEnd); | 
| 105 | > | } | 
| 106 |  |  | 
| 107 | < | private: | 
| 107 | > | private: | 
| 108 |  |  | 
| 109 | < | void clearState(); | 
| 109 | > | void clearState(); | 
| 110 |  |  | 
| 111 | < | bool loadScript(const std::string& filename, const std::string& script); | 
| 111 | > | bool loadScript(const std::string& filename, const std::string& script); | 
| 112 |  |  | 
| 113 | < | bool loadScriptFileInternal(const std::string& filename); | 
| 113 | > | bool loadScriptFileInternal(const std::string& filename); | 
| 114 |  |  | 
| 115 |  |  | 
| 116 | < | void clearDefinitionsAndLoadPredefined(); | 
| 116 | > | void clearDefinitionsAndLoadPredefined(); | 
| 117 |  |  | 
| 118 | < | void define(); | 
| 119 | < | void select(BitSet& bs); | 
| 120 | < | void predefine(const std::string& script); | 
| 118 | > | void define(); | 
| 119 | > | void select(OOPSEBitSet& bs); | 
| 120 | > | void predefine(const std::string& script); | 
| 121 |  |  | 
| 122 | < | void instructionDispatchLoop(BitSet& bs); | 
| 122 | > | void instructionDispatchLoop(OOPSEBitSet& bs); | 
| 123 |  |  | 
| 124 | < | void withinInstruction(const Token& instruction, BitSet& bs); | 
| 124 | > | void withinInstruction(const Token& instruction, OOPSEBitSet& bs); | 
| 125 |  |  | 
| 126 | < | BitSet comparatorInstruction(const Token& instruction); | 
| 127 | < | void compareProperty(StuntDouble* sd, BitSet& bs, int property, int comparator, float comparisonValue); | 
| 128 | < | BitSet nameInstruction(const std::string& name); | 
| 126 | > | OOPSEBitSet comparatorInstruction(const Token& instruction); | 
| 127 | > | void compareProperty(StuntDouble* sd, OOPSEBitSet& bs, int property, int comparator, float comparisonValue); | 
| 128 | > | OOPSEBitSet nameInstruction(const std::string& name); | 
| 129 | > | OOPSEBitSet indexInstruction(const boost::any& value); | 
| 130 | > | OOPSEBitSet expression(const std::vector<Token>& tokens, int pc); | 
| 131 |  |  | 
| 132 | < | BitSet expression(const std::vector<Token>& tokens, int pc); | 
| 147 | < |  | 
| 148 | < | BitSet lookupValue(const std::string& variable); | 
| 132 | > | OOPSEBitSet lookupValue(const std::string& variable); | 
| 133 |  |  | 
| 134 | < | void evalError(const std::string& message) { | 
| 135 | < | std::cerr << "SelectionEvaulator Error: " << message <<  std::endl; | 
| 136 | < | } | 
| 134 | > | void evalError(const std::string& message) { | 
| 135 | > | std::cerr << "SelectionEvaulator Error: " << message <<  std::endl; | 
| 136 | > | } | 
| 137 |  |  | 
| 138 | < | void unrecognizedCommand(const Token& token) { | 
| 139 | < | evalError("unrecognized command:" + boost::any_cast<std::string>(token.value)); | 
| 140 | < | } | 
| 138 | > | void unrecognizedCommand(const Token& token) { | 
| 139 | > | evalError("unrecognized command:" + boost::any_cast<std::string>(token.value)); | 
| 140 | > | } | 
| 141 |  |  | 
| 142 | < | void unrecognizedExpression() { | 
| 143 | < | evalError("unrecognized expression"); | 
| 144 | < | } | 
| 142 | > | void unrecognizedExpression() { | 
| 143 | > | evalError("unrecognized expression"); | 
| 144 | > | } | 
| 145 |  |  | 
| 146 | < | void unrecognizedAtomProperty(int property){ | 
| 147 | < | evalError("unrecognized atom property"); | 
| 148 | < | } | 
| 146 | > | void unrecognizedAtomProperty(int property){ | 
| 147 | > | evalError("unrecognized atom property"); | 
| 148 | > | } | 
| 149 |  |  | 
| 150 | < | void unrecognizedIdentifier(const std::string& identifier) { | 
| 151 | < | evalError("unrecognized identifier:" + identifier); | 
| 152 | < | } | 
| 150 | > | void unrecognizedIdentifier(const std::string& identifier) { | 
| 151 | > | evalError("unrecognized identifier:" + identifier); | 
| 152 | > | } | 
| 153 |  |  | 
| 154 | < | bool containDynamicToken(const std::vector<Token>& tokens); | 
| 154 | > | void invalidIndexRange(std::pair<int, int> range) { | 
| 155 | > | evalError("invalid index range: [" + toString(range.first) + ", " + toString(range.second) + ")"); | 
| 156 | > | } | 
| 157 | > |  | 
| 158 | > | void invalidIndex(int index) { | 
| 159 | > | evalError("invalid index : " + toString(index) ); | 
| 160 | > | } | 
| 161 | > |  | 
| 162 |  |  | 
| 163 | < | SelectionCompiler compiler; | 
| 163 | > | bool containDynamicToken(const std::vector<Token>& tokens); | 
| 164 |  |  | 
| 165 | < | //const static int scriptLevelMax = 10; | 
| 166 | < | //int scriptLevel; | 
| 165 | > | RealType getCharge(Atom* atom); | 
| 166 | > |  | 
| 167 | > | SelectionCompiler compiler; | 
| 168 |  |  | 
| 169 | < | //Context stack[scriptLevelMax]; | 
| 169 | > | //const static int scriptLevelMax = 10; | 
| 170 | > | //int scriptLevel; | 
| 171 |  |  | 
| 172 | < | std::string filename; | 
| 180 | < | std::string script; | 
| 181 | < | std::vector<int> linenumbers; | 
| 182 | < | std::vector<int> lineIndices; | 
| 183 | < | std::vector<std::vector<Token> > aatoken; | 
| 184 | < | int pc; // program counter | 
| 172 | > | //Context stack[scriptLevelMax]; | 
| 173 |  |  | 
| 174 | < | bool error; | 
| 175 | < | std::string errorMessage; | 
| 174 | > | std::string filename; | 
| 175 | > | std::string script; | 
| 176 | > | std::vector<int> linenumbers; | 
| 177 | > | std::vector<int> lineIndices; | 
| 178 | > | std::vector<std::vector<Token> > aatoken; | 
| 179 | > | int pc; // program counter | 
| 180 |  |  | 
| 181 | < | std::vector<Token> statement; | 
| 182 | < | int statementLength; | 
| 181 | > | bool error; | 
| 182 | > | std::string errorMessage; | 
| 183 |  |  | 
| 184 | < | SimInfo* info; | 
| 185 | < | NameFinder finder; | 
| 194 | < | int nStuntDouble;   //natoms + nrigidbodies | 
| 195 | < | std::map<std::string, boost::any > variables; | 
| 184 | > | std::vector<Token> statement; | 
| 185 | > | int statementLength; | 
| 186 |  |  | 
| 187 | < | bool isDynamic_; | 
| 188 | < | bool isLoaded_; | 
| 187 | > | SimInfo* info; | 
| 188 | > | NameFinder nameFinder; | 
| 189 | > | DistanceFinder distanceFinder; | 
| 190 | > | IndexFinder indexFinder; | 
| 191 | > | int nStuntDouble;   //natoms + nrigidbodies | 
| 192 | > |  | 
| 193 | > | typedef std::map<std::string, boost::any > VariablesType; | 
| 194 | > | VariablesType variables; | 
| 195 | > |  | 
| 196 | > | bool isDynamic_; | 
| 197 | > | bool isLoaded_; | 
| 198 |  |  | 
| 199 | < | }; | 
| 199 | > | }; | 
| 200 |  |  | 
| 201 |  | } | 
| 202 |  | #endif |