| 35 |  | * | 
| 36 |  | * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). | 
| 37 |  | * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). | 
| 38 | < | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). | 
| 38 | > | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 234107 (2008). | 
| 39 |  | * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010). | 
| 40 |  | * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). | 
| 41 |  | */ | 
| 122 |  | const  static int embeddedExpression= (1 << 19); // embedded expression | 
| 123 |  | const static int index = (1 << 20) | expression; | 
| 124 |  | // rasmol commands | 
| 125 | < | const static int define       = command | expressionCommand |1; | 
| 126 | < | const static int select       = command |expressionCommand |2 ; | 
| 125 | > | const static int define       = command | expressionCommand | 1; | 
| 126 | > | const static int select       = command | expressionCommand | 2 ; | 
| 127 |  |  | 
| 128 |  | //predefine | 
| 129 |  | //const static int selected    = predefinedset |0; | 
| 142 |  | const static int none         = expression | 10; | 
| 143 |  | const static int name         = expression | 11; | 
| 144 |  | const static int hull         = expression | dynamic | 12; | 
| 145 | + |  | 
| 146 |  | // miguel 2005 01 01 | 
| 147 |  | // these are used to demark the beginning and end of expressions | 
| 148 |  | // they do not exist in the source code, but are emitted by the | 
| 151 |  | const static int expressionEnd   = expression | 101; | 
| 152 |  |  | 
| 153 |  | const static int mass         = atomproperty | 0; | 
| 154 | < | const static int charge       = atomproperty | 1; | 
| 154 | > | const static int charge       = atomproperty | dynamic | 1; | 
| 155 |  | const static int x            = atomproperty | dynamic | 2; | 
| 156 |  | const static int y            = atomproperty | dynamic | 3; | 
| 157 |  | const static int z            = atomproperty | dynamic | 4; | 
| 158 |  | const static int r            = atomproperty | dynamic | 5; | 
| 159 | + | const static int wrappedX     = atomproperty | dynamic | 6; | 
| 160 | + | const static int wrappedY     = atomproperty | dynamic | 7; | 
| 161 | + | const static int wrappedZ     = atomproperty | dynamic | 8; | 
| 162 |  |  | 
| 163 |  | const static int opGT         = comparator |  dynamic | 0; | 
| 164 |  | const static int opGE         = comparator |  dynamic | 1; |