# | Line 6 | Line 6 | |
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6 | * redistribute this software in source and binary code form, provided | |
7 | * that the following conditions are met: | |
8 | * | |
9 | < | * 1. Acknowledgement of the program authors must be made in any |
10 | < | * publication of scientific results based in part on use of the |
11 | < | * program. An acceptable form of acknowledgement is citation of |
12 | < | * the article in which the program was described (Matthew |
13 | < | * A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher |
14 | < | * J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented |
15 | < | * Parallel Simulation Engine for Molecular Dynamics," |
16 | < | * J. Comput. Chem. 26, pp. 252-271 (2005)) |
17 | < | * |
18 | < | * 2. Redistributions of source code must retain the above copyright |
9 | > | * 1. Redistributions of source code must retain the above copyright |
10 | * notice, this list of conditions and the following disclaimer. | |
11 | * | |
12 | < | * 3. Redistributions in binary form must reproduce the above copyright |
12 | > | * 2. Redistributions in binary form must reproduce the above copyright |
13 | * notice, this list of conditions and the following disclaimer in the | |
14 | * documentation and/or other materials provided with the | |
15 | * distribution. | |
# | Line 37 | Line 28 | |
28 | * arising out of the use of or inability to use software, even if the | |
29 | * University of Notre Dame has been advised of the possibility of | |
30 | * such damages. | |
31 | + | * |
32 | + | * SUPPORT OPEN SCIENCE! If you use OpenMD or its source code in your |
33 | + | * research, please cite the appropriate papers when you publish your |
34 | + | * work. Good starting points are: |
35 | + | * |
36 | + | * [1] Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). |
37 | + | * [2] Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). |
38 | + | * [3] Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). |
39 | + | * [4] Vardeman & Gezelter, in progress (2009). |
40 | */ | |
41 | ||
42 | #include <functional> | |
43 | + | #include "config.h" |
44 | + | namespace OpenMD { |
45 | ||
46 | < | namespace oopse { |
47 | < | |
48 | < | /** |
49 | < | * copy_if is one of the missing functions in STL. |
50 | < | * copy_if copies elements from the range [first, last) to the range [result, result + (last-first)), |
51 | < | * except that any element for which pred is false is not copied. |
52 | < | */ |
51 | < | template<typename InputIterator, typename OutputIterator, typename Predicate> |
52 | < | OutputIterator copy_if(InputIterator first, InputIterator last, OutputIterator result, Predicate p) { |
46 | > | /** |
47 | > | * copy_if is one of the missing functions in STL. |
48 | > | * copy_if copies elements from the range [first, last) to the range [result, result + (last-first)), |
49 | > | * except that any element for which pred is false is not copied. |
50 | > | */ |
51 | > | template<typename InputIterator, typename OutputIterator, typename Predicate> |
52 | > | OutputIterator copy_if(InputIterator first, InputIterator last, OutputIterator result, Predicate p) { |
53 | while (first != last) { | |
54 | < | if (p(*first)) { |
55 | < | *result++ = *first; |
56 | < | } |
57 | < | ++first; |
54 | > | if (p(*first)) { |
55 | > | *result++ = *first; |
56 | > | } |
57 | > | ++first; |
58 | } | |
59 | ||
60 | return result; | |
61 | < | } |
61 | > | } |
62 | ||
63 | ||
64 | ||
65 | < | template<typename T> |
66 | < | struct logical_xor :public std::binary_function<T, T, bool> { |
67 | < | double operator()(T x, T y) { return x ^ y; } |
68 | < | }; |
65 | > | template<typename T> |
66 | > | struct logical_xor :public std::binary_function<T, T, bool> { |
67 | > | RealType operator()(T x, T y) { return x ^ y; } |
68 | > | }; |
69 | ||
70 | } |
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