| 6 |  | * redistribute this software in source and binary code form, provided | 
| 7 |  | * that the following conditions are met: | 
| 8 |  | * | 
| 9 | < | * 1. Acknowledgement of the program authors must be made in any | 
| 10 | < | *    publication of scientific results based in part on use of the | 
| 11 | < | *    program.  An acceptable form of acknowledgement is citation of | 
| 12 | < | *    the article in which the program was described (Matthew | 
| 13 | < | *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher | 
| 14 | < | *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented | 
| 15 | < | *    Parallel Simulation Engine for Molecular Dynamics," | 
| 16 | < | *    J. Comput. Chem. 26, pp. 252-271 (2005)) | 
| 17 | < | * | 
| 18 | < | * 2. Redistributions of source code must retain the above copyright | 
| 9 | > | * 1. Redistributions of source code must retain the above copyright | 
| 10 |  | *    notice, this list of conditions and the following disclaimer. | 
| 11 |  | * | 
| 12 | < | * 3. Redistributions in binary form must reproduce the above copyright | 
| 12 | > | * 2. Redistributions in binary form must reproduce the above copyright | 
| 13 |  | *    notice, this list of conditions and the following disclaimer in the | 
| 14 |  | *    documentation and/or other materials provided with the | 
| 15 |  | *    distribution. | 
| 28 |  | * arising out of the use of or inability to use software, even if the | 
| 29 |  | * University of Notre Dame has been advised of the possibility of | 
| 30 |  | * such damages. | 
| 31 | + | * | 
| 32 | + | * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your | 
| 33 | + | * research, please cite the appropriate papers when you publish your | 
| 34 | + | * work.  Good starting points are: | 
| 35 | + | * | 
| 36 | + | * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). | 
| 37 | + | * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). | 
| 38 | + | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). | 
| 39 | + | * [4]  Vardeman & Gezelter, in progress (2009). | 
| 40 |  | */ | 
| 41 |  |  | 
| 42 |  | /** | 
| 54 |  | #include <list> | 
| 55 |  | #include <string> | 
| 56 |  | #include <vector> | 
| 57 | < | namespace oopse{ | 
| 57 | > | #include "config.h" | 
| 58 | > | namespace OpenMD{ | 
| 59 |  |  | 
| 60 |  | /** | 
| 61 |  | * @ class GenericData GenericData.hpp "utils/GenericData.hpp" | 
| 149 |  | /** FloatGenericData is a generic data type contains a float variable */ | 
| 150 |  | typedef SimpleTypeData<float> FloatGenericData; | 
| 151 |  |  | 
| 152 | < | /** DoubleGenericData is a generic data type contains a double variable */ | 
| 153 | < | typedef SimpleTypeData<double> DoubleGenericData; | 
| 152 | > | /** DoubleGenericData is a generic data type contains a RealType variable */ | 
| 153 | > | typedef SimpleTypeData<RealType> DoubleGenericData; | 
| 154 |  |  | 
| 155 |  | /** | 
| 156 |  | * @typedef StringGenericData | 
| 161 |  | *   PropertyMap propMap; | 
| 162 |  | *   GenericData* gdata; | 
| 163 |  | * | 
| 164 | < | *   s->setData("OOPSE"); | 
| 164 | > | *   s->setData("OpenMD"); | 
| 165 |  | *   propMap->addProperty(s); | 
| 166 |  | * | 
| 167 |  | *   gdata = propMap->getPropertyByName("MyStringGenericData"); | 
| 218 |  |  | 
| 219 |  | /** | 
| 220 |  | * @typedef IntVectorGenericData | 
| 221 | < | * A generic data type contains a  std::vector<double> variable. | 
| 221 | > | * A generic data type contains a  std::vector<RealType> variable. | 
| 222 |  | */ | 
| 223 | < | typedef VectorTypeData<double> DoubleVectorGenericData; | 
| 223 | > | typedef VectorTypeData<RealType> DoubleVectorGenericData; | 
| 224 |  |  | 
| 225 |  | /** | 
| 226 |  | * @typedef StringVectorGenericData | 
| 233 |  | *  std::vector<std::string>::iterator iter; | 
| 234 |  | * | 
| 235 |  | *  sv->push_back("Hello World"); | 
| 236 | < | *  sv->push_back("OOPSE"); | 
| 236 | > | *  sv->push_back("OpenMD"); | 
| 237 |  | * | 
| 238 |  | *  propMap.addProperty(sv); | 
| 239 |  | * | 
| 253 |  | typedef VectorTypeData<std::string> StringVectorGenericData; | 
| 254 |  |  | 
| 255 |  |  | 
| 256 | < | } // namespace oopse | 
| 256 | > | } // namespace OpenMD | 
| 257 |  | #endif //UTIL _GENERICDATA_HPP |