| 1 | /* | 
| 2 | * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. | 
| 3 | * | 
| 4 | * The University of Notre Dame grants you ("Licensee") a | 
| 5 | * non-exclusive, royalty free, license to use, modify and | 
| 6 | * redistribute this software in source and binary code form, provided | 
| 7 | * that the following conditions are met: | 
| 8 | * | 
| 9 | * 1. Redistributions of source code must retain the above copyright | 
| 10 | *    notice, this list of conditions and the following disclaimer. | 
| 11 | * | 
| 12 | * 2. Redistributions in binary form must reproduce the above copyright | 
| 13 | *    notice, this list of conditions and the following disclaimer in the | 
| 14 | *    documentation and/or other materials provided with the | 
| 15 | *    distribution. | 
| 16 | * | 
| 17 | * This software is provided "AS IS," without a warranty of any | 
| 18 | * kind. All express or implied conditions, representations and | 
| 19 | * warranties, including any implied warranty of merchantability, | 
| 20 | * fitness for a particular purpose or non-infringement, are hereby | 
| 21 | * excluded.  The University of Notre Dame and its licensors shall not | 
| 22 | * be liable for any damages suffered by licensee as a result of | 
| 23 | * using, modifying or distributing the software or its | 
| 24 | * derivatives. In no event will the University of Notre Dame or its | 
| 25 | * licensors be liable for any lost revenue, profit or data, or for | 
| 26 | * direct, indirect, special, consequential, incidental or punitive | 
| 27 | * damages, however caused and regardless of the theory of liability, | 
| 28 | * arising out of the use of or inability to use software, even if the | 
| 29 | * University of Notre Dame has been advised of the possibility of | 
| 30 | * such damages. | 
| 31 | * | 
| 32 | * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your | 
| 33 | * research, please cite the appropriate papers when you publish your | 
| 34 | * work.  Good starting points are: | 
| 35 | * | 
| 36 | * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). | 
| 37 | * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). | 
| 38 | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). | 
| 39 | * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010). | 
| 40 | * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). | 
| 41 | */ | 
| 42 |  | 
| 43 | /** | 
| 44 | * @file GenericData.hpp | 
| 45 | * @brief | 
| 46 | * @author tlin | 
| 47 | * @date 09/20/2004 | 
| 48 | * @time 9:30am | 
| 49 | * @version 1.0 | 
| 50 | */ | 
| 51 |  | 
| 52 | #ifndef UTIL_GENERICDATA_HPP | 
| 53 | #define UTIL_GENERICDATA_HPP | 
| 54 |  | 
| 55 | #include <list> | 
| 56 | #include <string> | 
| 57 | #include <vector> | 
| 58 | #include "config.h" | 
| 59 | namespace OpenMD{ | 
| 60 |  | 
| 61 | /** | 
| 62 | * @ class GenericData GenericData.hpp "utils/GenericData.hpp" | 
| 63 | * @brief Base class for generic data which is associated with an id | 
| 64 | */ | 
| 65 | class GenericData{ | 
| 66 | public: | 
| 67 | GenericData() :  id_("UndefinedGenericData"){} | 
| 68 |  | 
| 69 | GenericData(const std::string& id) {  setID(id);  } | 
| 70 |  | 
| 71 | /** virtual destructor */ | 
| 72 | virtual ~GenericData() {} | 
| 73 |  | 
| 74 |  | 
| 75 | /** | 
| 76 | *  Returns the id of this generic data | 
| 77 | * | 
| 78 | * @return the id of this generic data | 
| 79 | * | 
| 80 | * @see #setID | 
| 81 | */ | 
| 82 | const std::string getID() const { return id_;  } | 
| 83 |  | 
| 84 | /** | 
| 85 | *  Sets the id of this generic data | 
| 86 | * | 
| 87 | * @param id the id to be set | 
| 88 | * | 
| 89 | * @see #getID | 
| 90 | */ | 
| 91 | void setID(const std::string& id) { id_ = id;  } | 
| 92 |  | 
| 93 |  | 
| 94 | private: | 
| 95 | GenericData(const GenericData&); | 
| 96 | GenericData& operator=(GenericData&); | 
| 97 | std::string id_; | 
| 98 |  | 
| 99 | }; | 
| 100 |  | 
| 101 | /** | 
| 102 | * @class SimpleTypeData | 
| 103 | * @brief SimpleTypeData class is a POD  repository class | 
| 104 | * @warning ElemDataType must be copy constructible, and copy assignable | 
| 105 | */ | 
| 106 | template<typename ElemDataType> class SimpleTypeData : public GenericData{ | 
| 107 |  | 
| 108 | public: | 
| 109 | SimpleTypeData() :  GenericData(), data_(ElemDataType()) {} | 
| 110 | SimpleTypeData(const std::string& id) : GenericData(id), data_(ElemDataType()) {} | 
| 111 | SimpleTypeData(const std::string&id , const ElemDataType& data) : GenericData(id), data_(data) {} | 
| 112 | template<typename T> | 
| 113 | SimpleTypeData(const SimpleTypeData<T>& s) { | 
| 114 | data_ = s.getData(); | 
| 115 | } | 
| 116 |  | 
| 117 | SimpleTypeData<ElemDataType>& operator =(const SimpleTypeData<ElemDataType>& s) { | 
| 118 | if (this == &s) | 
| 119 | return *this; | 
| 120 |  | 
| 121 | data_ = s.getData(); | 
| 122 | return *this; | 
| 123 | } | 
| 124 |  | 
| 125 | template<typename T> | 
| 126 | SimpleTypeData<ElemDataType>& operator =(const SimpleTypeData<T>& s) { | 
| 127 | data_ = s.getData(); | 
| 128 | return *this; | 
| 129 | } | 
| 130 |  | 
| 131 | /** Returns POD data */ | 
| 132 | const ElemDataType& getData() const {return data_;} | 
| 133 | ElemDataType& getData()  {return data_;} | 
| 134 | /** | 
| 135 | * Sets POD data | 
| 136 | * @data POD data to be set | 
| 137 | */ | 
| 138 | void setData(const ElemDataType& data) { data_ = data;  } | 
| 139 |  | 
| 140 | private: | 
| 141 | ElemDataType data_; | 
| 142 | }; | 
| 143 |  | 
| 144 | /** BoolGenericData is a generic data type contains a bool variable */ | 
| 145 | typedef SimpleTypeData<bool> BoolGenericData; | 
| 146 |  | 
| 147 | /** IntGenericData is a generic data type contains an integer variable */ | 
| 148 | typedef SimpleTypeData<int> IntGenericData; | 
| 149 |  | 
| 150 | /** FloatGenericData is a generic data type contains a float variable */ | 
| 151 | typedef SimpleTypeData<float> FloatGenericData; | 
| 152 |  | 
| 153 | /** DoubleGenericData is a generic data type contains a RealType variable */ | 
| 154 | typedef SimpleTypeData<RealType> DoubleGenericData; | 
| 155 |  | 
| 156 | /** | 
| 157 | * @typedef StringGenericData | 
| 158 | * A generic data type contains a  std::string variable | 
| 159 | * | 
| 160 | * @code | 
| 161 | *   StringGenericData* s = new StringGenericData("MyStringGenericData"); | 
| 162 | *   PropertyMap propMap; | 
| 163 | *   GenericData* gdata; | 
| 164 | * | 
| 165 | *   s->setData("OpenMD"); | 
| 166 | *   propMap->addProperty(s); | 
| 167 | * | 
| 168 | *   gdata = propMap->getPropertyByName("MyStringGenericData"); | 
| 169 | *   if (gdata != NULL){ | 
| 170 | *     s = dynamic_cast<StringGenericData*>(gdata); | 
| 171 | *     if (s != NULL) | 
| 172 | *       std::cout << s->getData() << std::endl; | 
| 173 | *   } | 
| 174 | * | 
| 175 | * @endcode | 
| 176 | */ | 
| 177 | typedef SimpleTypeData<std::string> StringGenericData; | 
| 178 |  | 
| 179 | /** | 
| 180 | * @class STLContainerTypeData | 
| 181 | * @brief STL container type generic data which is associated with an id | 
| 182 | * | 
| 183 | * @template ContainerType | 
| 184 | * @template ElemDataType | 
| 185 | */ | 
| 186 | template <typename ElemDataType > | 
| 187 | class VectorTypeData : public GenericData { | 
| 188 | public: | 
| 189 | typedef VectorTypeData<ElemDataType> SelfType; | 
| 190 |  | 
| 191 | VectorTypeData(const std::string& id) | 
| 192 | : GenericData(id){} | 
| 193 |  | 
| 194 | VectorTypeData(const SelfType& s) : data_(s){} | 
| 195 |  | 
| 196 | SelfType& operator =(const SelfType& s){ | 
| 197 | if (this == &s) | 
| 198 | return *this; | 
| 199 |  | 
| 200 | this->data_ = s.data_; | 
| 201 | return *this; | 
| 202 | } | 
| 203 |  | 
| 204 | private: | 
| 205 | std::vector<ElemDataType> data_; | 
| 206 | }; | 
| 207 |  | 
| 208 | /** | 
| 209 | * @typedef IntVectorGenericData | 
| 210 | * A generic data type contains a  std::vector<int> variable. | 
| 211 | */ | 
| 212 | typedef VectorTypeData<int> IntVectorGenericData; | 
| 213 |  | 
| 214 | /** | 
| 215 | * @typedef IntVectorGenericData | 
| 216 | * A generic data type contains a  std::vector<float> variable. | 
| 217 | */ | 
| 218 | typedef VectorTypeData<float> FloatVectorGenericData; | 
| 219 |  | 
| 220 | /** | 
| 221 | * @typedef IntVectorGenericData | 
| 222 | * A generic data type contains a  std::vector<RealType> variable. | 
| 223 | */ | 
| 224 | typedef VectorTypeData<RealType> DoubleVectorGenericData; | 
| 225 |  | 
| 226 | /** | 
| 227 | * @typedef StringVectorGenericData | 
| 228 | *  A generic data type contains a  std::vector<string> variable. | 
| 229 | * | 
| 230 | * @code | 
| 231 | *  StringVectorGenericData* sv = new StringVectorGenericData("MyStringVector"); | 
| 232 | *  GenericData* gdata; | 
| 233 | *  PropertyMap propMap; | 
| 234 | *  std::vector<std::string>::iterator iter; | 
| 235 | * | 
| 236 | *  sv->push_back("Hello World"); | 
| 237 | *  sv->push_back("OpenMD"); | 
| 238 | * | 
| 239 | *  propMap.addProperty(sv); | 
| 240 | * | 
| 241 | *  gdata = propMap.getPropertyByName("MyStringVector"); | 
| 242 | * | 
| 243 | *  if (gdata != NULL){ | 
| 244 | * | 
| 245 | *    sv = dynamic_cast<StringVectorGenericData*>(gdata); | 
| 246 | * | 
| 247 | *    if (sv != NULL){ | 
| 248 | *      for (iter = sv->begin(); iter != sv->end(); ++ iter) | 
| 249 | *        std::cout << *iter << std::endl; | 
| 250 | *    } | 
| 251 | *  } | 
| 252 | * @endcode | 
| 253 | */ | 
| 254 | typedef VectorTypeData<std::string> StringVectorGenericData; | 
| 255 |  | 
| 256 |  | 
| 257 | } // namespace OpenMD | 
| 258 | #endif //UTIL _GENERICDATA_HPP |