| 6 |  | * redistribute this software in source and binary code form, provided | 
| 7 |  | * that the following conditions are met: | 
| 8 |  | * | 
| 9 | < | * 1. Acknowledgement of the program authors must be made in any | 
| 10 | < | *    publication of scientific results based in part on use of the | 
| 11 | < | *    program.  An acceptable form of acknowledgement is citation of | 
| 12 | < | *    the article in which the program was described (Matthew | 
| 13 | < | *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher | 
| 14 | < | *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented | 
| 15 | < | *    Parallel Simulation Engine for Molecular Dynamics," | 
| 16 | < | *    J. Comput. Chem. 26, pp. 252-271 (2005)) | 
| 17 | < | * | 
| 18 | < | * 2. Redistributions of source code must retain the above copyright | 
| 9 | > | * 1. Redistributions of source code must retain the above copyright | 
| 10 |  | *    notice, this list of conditions and the following disclaimer. | 
| 11 |  | * | 
| 12 | < | * 3. Redistributions in binary form must reproduce the above copyright | 
| 12 | > | * 2. Redistributions in binary form must reproduce the above copyright | 
| 13 |  | *    notice, this list of conditions and the following disclaimer in the | 
| 14 |  | *    documentation and/or other materials provided with the | 
| 15 |  | *    distribution. | 
| 28 |  | * arising out of the use of or inability to use software, even if the | 
| 29 |  | * University of Notre Dame has been advised of the possibility of | 
| 30 |  | * such damages. | 
| 31 | + | * | 
| 32 | + | * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your | 
| 33 | + | * research, please cite the appropriate papers when you publish your | 
| 34 | + | * work.  Good starting points are: | 
| 35 | + | * | 
| 36 | + | * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). | 
| 37 | + | * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). | 
| 38 | + | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). | 
| 39 | + | * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010). | 
| 40 | + | * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). | 
| 41 |  | */ | 
| 42 |  |  | 
| 43 |  | /** | 
| 52 |  | #define UTIL_STRINGTOKENIZER_HPP | 
| 53 |  |  | 
| 54 |  | #include <string> | 
| 55 | + | #include <stdlib.h> | 
| 56 |  | #include <vector> | 
| 57 | + | #include "config.h" | 
| 58 | + | namespace OpenMD { | 
| 59 |  |  | 
| 56 | – | namespace oopse { | 
| 57 | – |  | 
| 60 |  | /** | 
| 61 |  | * @class StringTokenizer.hpp "util/StringTokenizer.hpp" | 
| 62 |  | * @brief The string tokenizer class allows an application to break a string into tokens | 
| 149 |  | float nextTokenAsFloat(); | 
| 150 |  |  | 
| 151 |  | /** | 
| 152 | < | * Returns the next token from this string tokenizer as a double. | 
| 153 | < | * @return the next token from this string tokenizer as a double. | 
| 152 | > | * Returns the next token from this string tokenizer as a RealType. | 
| 153 | > | * @return the next token from this string tokenizer as a RealType. | 
| 154 |  | */ | 
| 155 | < | double nextTokenAsDouble(); | 
| 155 | > | RealType nextTokenAsDouble(); | 
| 156 |  |  | 
| 157 |  | /** | 
| 158 |  | * Returns the next token without advancing the position of the StringTokenizer. | 
| 204 |  | std::string::const_iterator end_; | 
| 205 |  | }; | 
| 206 |  |  | 
| 207 | < | }                               //namespace oopse | 
| 207 | > | }                               //namespace OpenMD | 
| 208 |  |  | 
| 209 |  | #endif                          //UTIL_STRINGTOKENIZER_HPP |