| 1 | /* | 
| 2 | * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. | 
| 3 | * | 
| 4 | * The University of Notre Dame grants you ("Licensee") a | 
| 5 | * non-exclusive, royalty free, license to use, modify and | 
| 6 | * redistribute this software in source and binary code form, provided | 
| 7 | * that the following conditions are met: | 
| 8 | * | 
| 9 | * 1. Redistributions of source code must retain the above copyright | 
| 10 | *    notice, this list of conditions and the following disclaimer. | 
| 11 | * | 
| 12 | * 2. Redistributions in binary form must reproduce the above copyright | 
| 13 | *    notice, this list of conditions and the following disclaimer in the | 
| 14 | *    documentation and/or other materials provided with the | 
| 15 | *    distribution. | 
| 16 | * | 
| 17 | * This software is provided "AS IS," without a warranty of any | 
| 18 | * kind. All express or implied conditions, representations and | 
| 19 | * warranties, including any implied warranty of merchantability, | 
| 20 | * fitness for a particular purpose or non-infringement, are hereby | 
| 21 | * excluded.  The University of Notre Dame and its licensors shall not | 
| 22 | * be liable for any damages suffered by licensee as a result of | 
| 23 | * using, modifying or distributing the software or its | 
| 24 | * derivatives. In no event will the University of Notre Dame or its | 
| 25 | * licensors be liable for any lost revenue, profit or data, or for | 
| 26 | * direct, indirect, special, consequential, incidental or punitive | 
| 27 | * damages, however caused and regardless of the theory of liability, | 
| 28 | * arising out of the use of or inability to use software, even if the | 
| 29 | * University of Notre Dame has been advised of the possibility of | 
| 30 | * such damages. | 
| 31 | * | 
| 32 | * SUPPORT OPEN SCIENCE!  If you use OpenMD or its source code in your | 
| 33 | * research, please cite the appropriate papers when you publish your | 
| 34 | * work.  Good starting points are: | 
| 35 | * | 
| 36 | * [1]  Meineke, et al., J. Comp. Chem. 26, 252-271 (2005). | 
| 37 | * [2]  Fennell & Gezelter, J. Chem. Phys. 124, 234104 (2006). | 
| 38 | * [3]  Sun, Lin & Gezelter, J. Chem. Phys. 128, 24107 (2008). | 
| 39 | * [4]  Kuang & Gezelter,  J. Chem. Phys. 133, 164101 (2010). | 
| 40 | * [5]  Vardeman, Stocker & Gezelter, J. Chem. Theory Comput. 7, 834 (2011). | 
| 41 | */ | 
| 42 |  | 
| 43 | #include "config.h" | 
| 44 | #include <algorithm> | 
| 45 | #include <stdlib.h> | 
| 46 | #include <cctype> | 
| 47 | #include <cstdlib> | 
| 48 | #include <string> | 
| 49 | #include "utils/StringUtils.hpp" | 
| 50 |  | 
| 51 | #ifdef _MSC_VER | 
| 52 | #define strcasecmp _stricmp | 
| 53 | #define strdup _strdup | 
| 54 | #define strtoull _strtoui64 | 
| 55 | #endif | 
| 56 |  | 
| 57 |  | 
| 58 | namespace OpenMD { | 
| 59 | std::string UpperCase(const std::string& S) { | 
| 60 | std::string uc = S; | 
| 61 | unsigned int n = uc.size(); | 
| 62 | for (unsigned int j = 0; j < n; j++) { | 
| 63 | char sj = uc[j]; | 
| 64 | if (sj >= 'a' && sj <= 'z') uc[j] = (char)(sj - ('a' - 'A')); | 
| 65 | } | 
| 66 | return uc; | 
| 67 | } | 
| 68 |  | 
| 69 | std::string LowerCase(const std::string& S) { | 
| 70 | std::string lc = S; | 
| 71 | unsigned int n = lc.size(); | 
| 72 | for (unsigned int j = 0; j < n; j++) { | 
| 73 | char sj = lc[j]; | 
| 74 | if (sj >= 'A' && sj <= 'Z') lc[j] = (char)(sj + ('a' - 'A')); | 
| 75 | } | 
| 76 | return lc; | 
| 77 | } | 
| 78 |  | 
| 79 | char* trimSpaces(char *str) { | 
| 80 | size_t len; | 
| 81 | char *right, *left; | 
| 82 |  | 
| 83 | if (strlen(str) == 0) return(str); | 
| 84 |  | 
| 85 | /* Trim whitespace from left side */ | 
| 86 | for (left = str; isspace(*left); left++); | 
| 87 |  | 
| 88 | /* Trim whitespace from right side */ | 
| 89 | if ((len = strlen(left))) | 
| 90 | { | 
| 91 | right = left + (len - 1); | 
| 92 |  | 
| 93 | while (isspace(*right)) | 
| 94 | { | 
| 95 | *right = '\0'; | 
| 96 | right--; | 
| 97 | } | 
| 98 | } | 
| 99 |  | 
| 100 | /* Only do the str copy if there were spaces to the left */ | 
| 101 | if (left != str) | 
| 102 | strcpy(str, left); | 
| 103 |  | 
| 104 | return (str); | 
| 105 | } | 
| 106 |  | 
| 107 | int findBegin(std::istream &theStream, const char* startText ){ | 
| 108 | const int MAXLEN = 1024; | 
| 109 | char readLine[MAXLEN]; | 
| 110 | int foundText = 0; | 
| 111 | int lineNum; | 
| 112 | char* the_token; | 
| 113 |  | 
| 114 | // rewind the stream | 
| 115 | theStream.seekg (0, std::ios::beg); | 
| 116 | lineNum = 0; | 
| 117 |  | 
| 118 | if (!theStream.eof()) { | 
| 119 | theStream.getline(readLine, MAXLEN); | 
| 120 | lineNum++; | 
| 121 | } else { | 
| 122 | printf( "Error fast forwarding stream: stream is empty.\n"); | 
| 123 | return -1; | 
| 124 | } | 
| 125 |  | 
| 126 | while ( !foundText ) { | 
| 127 |  | 
| 128 | if (theStream.eof()) { | 
| 129 | printf("Error fast forwarding stream at line %d: " | 
| 130 | "stream ended unexpectedly.\n", lineNum); | 
| 131 | return -1; | 
| 132 | } | 
| 133 |  | 
| 134 | the_token = strtok( readLine, " ,;\t" ); | 
| 135 | if ( the_token != NULL) | 
| 136 | if (!strcasecmp("begin", the_token)) { | 
| 137 | the_token = strtok( NULL, " ,;\t" ); | 
| 138 | if ( the_token != NULL){ | 
| 139 | foundText = !strcasecmp( startText, the_token ); | 
| 140 | } | 
| 141 | } | 
| 142 |  | 
| 143 | if (!foundText) { | 
| 144 | if (!theStream.eof()) { | 
| 145 | theStream.getline(readLine, MAXLEN); | 
| 146 | lineNum++; | 
| 147 | } else { | 
| 148 | printf( "Error fast forwarding stream at line %d: " | 
| 149 | "stream ended unexpectedly.\n", lineNum); | 
| 150 | return -1; | 
| 151 | } | 
| 152 | } | 
| 153 | } | 
| 154 | return lineNum; | 
| 155 | } | 
| 156 |  | 
| 157 | int countTokens(char *line, char *delimiters) { | 
| 158 | /* PURPOSE: RETURN A COUNT OF THE NUMBER OF TOKENS ON THE LINE. */ | 
| 159 |  | 
| 160 | char *working_line;   /* WORKING COPY OF LINE. */ | 
| 161 | int ntokens;          /* NUMBER OF TOKENS FOUND IN LINE. */ | 
| 162 | char *strtok_ptr;     /* POINTER FOR STRTOK. */ | 
| 163 |  | 
| 164 | strtok_ptr= working_line= strdup(line); | 
| 165 |  | 
| 166 | ntokens=0; | 
| 167 | while (strtok(strtok_ptr,delimiters)!=NULL) | 
| 168 | { | 
| 169 | ntokens++; | 
| 170 | strtok_ptr=NULL; | 
| 171 | } | 
| 172 |  | 
| 173 | free(working_line); | 
| 174 | return(ntokens); | 
| 175 | } | 
| 176 |  | 
| 177 | int isEndLine(char *line) { | 
| 178 | char *working_line; | 
| 179 | char *foo; | 
| 180 |  | 
| 181 | working_line = strdup(line); | 
| 182 |  | 
| 183 | foo = strtok(working_line, " ,;\t"); | 
| 184 |  | 
| 185 | if (foo != NULL) { | 
| 186 |  | 
| 187 | if (!strcasecmp(foo, "end")) return 1; | 
| 188 |  | 
| 189 | } | 
| 190 |  | 
| 191 | return 0; | 
| 192 | } | 
| 193 |  | 
| 194 | std::string OpenMD_itoa(int value, unsigned int base) { | 
| 195 | const char digitMap[] = "0123456789abcdef"; | 
| 196 | std::string buf; | 
| 197 |  | 
| 198 | if (base == 0 || base > 16) { | 
| 199 | return buf; | 
| 200 | } | 
| 201 |  | 
| 202 | if (value == 0) { | 
| 203 | buf = "0"; | 
| 204 | return buf; | 
| 205 | } | 
| 206 |  | 
| 207 | // Take care negative int: | 
| 208 |  | 
| 209 | std::string sign; | 
| 210 | int _value = value; | 
| 211 | if (value < 0) { | 
| 212 | _value = -value; | 
| 213 | sign = "-"; | 
| 214 | } | 
| 215 |  | 
| 216 | // Translating number to string with base: | 
| 217 | for (int i = 30; _value && i ; --i) { | 
| 218 | buf = digitMap[ _value % base ] + buf; | 
| 219 | _value /= base; | 
| 220 | } | 
| 221 | return sign.append(buf); | 
| 222 | } | 
| 223 |  | 
| 224 |  | 
| 225 | std::string getPrefix(const std::string& str) { | 
| 226 | return str.substr(0, str.rfind('.')); | 
| 227 | } | 
| 228 |  | 
| 229 | std::string getSuffix(const std::string& str) { | 
| 230 | return str.substr(0, str.find('.')); | 
| 231 | } | 
| 232 |  | 
| 233 | bool isInteger(const std::string& str) { | 
| 234 |  | 
| 235 | bool result = false; | 
| 236 |  | 
| 237 | std::string::const_iterator i = str.begin(); | 
| 238 | if (i != str.end() && (*i == '+' || *i == '-' || std::isdigit(*i) )) { | 
| 239 | ++i; | 
| 240 | while (i != str.end() && std::isdigit(*i)) | 
| 241 | ++i; | 
| 242 | if (i == str.end()) | 
| 243 | result = true; | 
| 244 | } | 
| 245 |  | 
| 246 | return result; | 
| 247 | } | 
| 248 |  | 
| 249 | bool CaseInsensitiveEquals(const char ch1, const char ch2) { | 
| 250 | return std::toupper((unsigned char)ch1) == std::toupper((unsigned char)ch2); | 
| 251 | } | 
| 252 |  | 
| 253 | size_t CaseInsensitiveFind(const std::string& str1, const std::string& str2) { | 
| 254 | std::string::const_iterator pos = std::search(str1.begin(), str1.end(), str2.begin(), str2.end(), CaseInsensitiveEquals); | 
| 255 | if (pos == str1.end()) | 
| 256 | return std::string::npos; | 
| 257 | else | 
| 258 | return pos - str1.begin(); | 
| 259 | } | 
| 260 |  | 
| 261 | /** | 
| 262 | *    memparse - parse a string with mem suffixes into a number | 
| 263 | *    @ptr: Where parse begins | 
| 264 | *    @retptr: (output) Pointer to next char after parse completes | 
| 265 | * | 
| 266 | *    Parses a string into a number.  The number stored at @ptr is | 
| 267 | *    potentially suffixed with %K (for kilobytes, or 1024 bytes), | 
| 268 | *    %M (for megabytes, or 1048576 bytes), or %G (for gigabytes, or | 
| 269 | *    1073741824).  If the number is suffixed with K, M, or G, then | 
| 270 | *    the return value is the number multiplied by one kilobyte, one | 
| 271 | *    megabyte, or one gigabyte, respectively. | 
| 272 | */ | 
| 273 | unsigned long long memparse (char *ptr,  char **retptr) { | 
| 274 | unsigned long long ret = strtoull (ptr, retptr, 0); | 
| 275 |  | 
| 276 | switch (**retptr) { | 
| 277 | case 'G': | 
| 278 | case 'g': | 
| 279 | ret <<= 10; | 
| 280 | case 'M': | 
| 281 | case 'm': | 
| 282 | ret <<= 10; | 
| 283 | case 'K': | 
| 284 | case 'k': | 
| 285 | ret <<= 10; | 
| 286 | (*retptr)++; | 
| 287 | default: | 
| 288 | break; | 
| 289 | } | 
| 290 | return ret; | 
| 291 | } | 
| 292 |  | 
| 293 | } |