fix a parsing bug in ElectroStaticAtomTypesSectionParser
NPT in progress
no message
fix a bug in Exclude List
Dump2Xyz is also working, energy of NVE is not conserved
begin to fix bugs
Fixed a bug in countTokens in StringTokenizer
still have two linking problem
change endl to std::endl
minor fix
remove using namespace std in .cpp file
adding qulified name prefix std
replace string by std::string
replace misuse of using namespace std in header files
NVE get built
rename DumpWrite to DumpWriter
visitors get built
except integrator and constraint, other directories get built
refactory AtomType
minor fix
io get built, next is integrator
brains get built
fix Thermo
Section Parsers get compiled
minor fixed
minor fixed
#inlcude statement can not be embedded
more files get fixed
part of io get built
rename some files
rename some files
more get built
change Makefile
add SetForceManager method to integrator
add Electrostatic AtomType Section Parser
add EAM AtomType Section Parser
add BondTypesSectionParser, BendTypesSectionParser and TorsionTypeSectionParser
adding section parsers
adding section parsers
remove more useless files
finish DumpReader, DumpWriter.Next Step is LJFF and integrators
OOPSE = Object-Obfuscated Parallel Simulation Engine
add Snapshot.cpp, remove useless mpiSimulation
more work on SimInfo
another painful day (1) SimCreator, SimInfo, mpiSimulation (2) DumpReader, DumpWriter (InitializeFrom File will be removed) (3) ForceField (at least LJ) and BondType, BendType, TorsionType (4)Integrator (5)oopse.cpp (6)visitors & Dump2XYZ (7)SimpleBuilder (8)Constraint & ZConstraint
add a configurable StatWriter
More to break
adding ForceField and TypeContainer classes
mess up ......
Molecule, Atom, DirectionalAtom, RigidBody and StuntDouble classes get compiled
This commit was manufactured by cvs2svn to create branch 'new_design'.
replace old GebericData with new GenericData
fix some bugs in Quaternion class
fix a bunch of bugs
change const_cast to statc_const
fix a bug in basic_ifstrstream.hpp
fix include
add checkFilename Option
adding basic_ifstrstream
FileReader in progress
define DEV_ROOT as relative path
change Makefile to relative path
add yacc and lex rules
change the #include in source files
Import of OOPSE v. 2.0