MPI version is built
sticky module get compiled
*** empty log message ***
refine factory pattern to make it initialized correctly
oopse get built
still have two linking problem
adding qulified name prefix std
replace misuse of using namespace std in header files
spell check
except integrator and constraint, other directories get built
refactory AtomType
Section Parsers get compiled
minor fixed
minor fixed
#inlcude statement can not be embedded
rename QuarticTorsion.hpp to QuarticTorsionType.hpp
add CubicTorsionType and QuarticTorsionType
more file get fixed
types get built
types get built
rename some files
rename some files
refactory NPT integrator
add Electrostatic AtomType Section Parser
add EAM AtomType Section Parser
adding section parsers
remove more useless files
DUFF is almost done except error checking
adding DUFF parser
refine QudraticBond
add QuadraticBendType.hpp
UreyBradleyBend and GhostBend
more types stuff and Chebyshev Polynomial
add PolynomialBondType, PolynomialBendType, PolynomialTorsionType, HarmonicBendType and CharmmTorsionType. Need to refine the design and add document for them
add PolynomialBondType
added some new stuff
BondType, BendType and TorsionType
adding ForceFieldFactory and LJFF classes
Molecule, Atom, DirectionalAtom, RigidBody and StuntDouble classes get compiled
adding BondType, BendType, TorsionType
This commit was manufactured by cvs2svn to create branch 'new_design'.
fixed duplicate declaration foo
Making ShapeType into a ShapeAtomType, fixing some isXXX
Dear god! It runs and conserves energy!
strDUP not strCOPY
fixey fixey
More on AtomType and DirectionalAtomType
Adding AtomType
Breaky Breaky. Fixey Fixey.
fix some bugs in Quaternion class
Working on getting Shapes into OOPSE
Added ShapeType
define DEV_ROOT as relative path
change Makefile to relative path
change the #include in source files
Import of OOPSE v. 2.0