[ViewVC] Log of: group/branches/new_design/OOPSE-3.0/src/brains

Revision 1751 - Directory Listing - [select for diffs]
Modified Thu Nov 18 04:12:28 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1740 , to selected 1724

remove some junk files

Revision 1740 - Directory Listing - [select for diffs]
Modified Mon Nov 15 23:00:32 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1739 , to selected 1724

adding ForceFieldFactory and LJFF classes

Revision 1739 - Directory Listing - [select for diffs]
Modified Mon Nov 15 18:02:15 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1738 , to selected 1724

finish DumpReader, DumpWriter.Next Step is LJFF and integrators

Revision 1738 - Directory Listing - [select for diffs]
Modified Sat Nov 13 05:08:12 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1735 , to selected 1724

refactory, refactory, refactory

Revision 1735 - Directory Listing - [select for diffs]
Modified Fri Nov 12 17:40:03 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1734 , to selected 1724

SimCreator and SimInfo are  ready for unit test

Revision 1734 - Directory Listing - [select for diffs]
Modified Fri Nov 12 07:05:43 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1733 , to selected 1724

MoleculeCreator forget to create CutoffGroups for free atoms

Revision 1733 - Directory Listing - [select for diffs]
Modified Fri Nov 12 06:19:04 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1727 , to selected 1724

OOPSE = Object-Obfuscated Parallel Simulation Engine

Revision 1727 - Directory Listing - [select for diffs]
Modified Thu Nov 11 16:41:58 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1726 , to selected 1724

add Snapshot.cpp, remove useless mpiSimulation

Revision 1726 - Directory Listing - [select for diffs]
Modified Wed Nov 10 22:50:03 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1725 , to selected 1724

more work on SimInfo

Revision 1725 - Directory Listing - [select for diffs]
Modified Wed Nov 10 22:01:06 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1724

another painful day
(1) SimCreator, SimInfo, mpiSimulation
(2) DumpReader, DumpWriter (InitializeFrom File will be removed)
(3) ForceField (at least LJ) and BondType, BendType, TorsionType
(4)Integrator
(5)oopse.cpp
(6)visitors & Dump2XYZ
(7)SimpleBuilder
(8)Constraint & ZConstraint

Revision 1724 - Directory Listing - [selected]
Modified Wed Nov 10 14:52:45 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1723

add a configurable StatWriter

Revision 1723 - Directory Listing - [select for diffs]
Modified Wed Nov 10 02:58:55 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1722 , to selected 1724

mpiSimulation in progress

Revision 1722 - Directory Listing - [select for diffs]
Modified Tue Nov 9 23:11:39 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1721 , to selected 1724

adding ForceManager

Revision 1721 - Directory Listing - [select for diffs]
Modified Tue Nov 9 01:08:31 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1720 , to selected 1724

More to break

Revision 1720 - Directory Listing - [select for diffs]
Modified Sat Nov 6 05:21:55 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1719 , to selected 1724

adding ForceField and TypeContainer classes

Revision 1719 - Directory Listing - [select for diffs]
Modified Fri Nov 5 23:38:27 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1713 , to selected 1724

Fix Exclude class etc.

Revision 1713 - Directory Listing - [select for diffs]
Modified Fri Nov 5 02:56:22 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1712 , to selected 1724

Pain......

Revision 1712 - Directory Listing - [select for diffs]
Modified Thu Nov 4 20:55:01 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1710 , to selected 1724

time to break SimSetup

Revision 1710 - Directory Listing - [select for diffs]
Modified Thu Nov 4 19:48:22 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1703 , to selected 1724

adding Stats class

Revision 1703 - Directory Listing - [select for diffs]
Modified Wed Nov 3 19:56:02 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1702 , to selected 1724

Adding SimCreator class(similar as SimSetup)

Revision 1702 - Directory Listing - [select for diffs]
Modified Wed Nov 3 18:00:36 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1701 , to selected 1724

ForceFiled get compiled. Still a long way to go ......

Revision 1701 - Directory Listing - [select for diffs]
Modified Wed Nov 3 16:08:43 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1700 , to selected 1724

mess up ......

Revision 1700 - Directory Listing - [select for diffs]
Modified Tue Nov 2 22:41:09 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1699 , to selected 1724

Adding LocalIndexManager and Migrator. Need unit test

Revision 1699 - Directory Listing - [select for diffs]
Modified Tue Nov 2 17:00:12 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1696 , to selected 1724

SimModel in progress

Revision 1696 - Directory Listing - [select for diffs]
Modified Tue Nov 2 15:23:46 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1695 , to selected 1724

adding SimModel(something similar as SimInfo)

Revision 1695 - Directory Listing - [select for diffs]
Modified Mon Nov 1 22:52:57 2004 UTC (19 years, 8 months ago) by tim
Diff to previous 1683 , to selected 1724

Molecule, Atom, DirectionalAtom, RigidBody and StuntDouble classes get compiled

Revision 1683 - Directory Listing - [select for diffs]
Modified Thu Oct 28 22:34:02 2004 UTC (19 years, 8 months ago) by (unknown author)
Diff to previous 1682 , to selected 1724

This commit was manufactured by cvs2svn to create branch 'new_design'.

Revision 1682 - Directory Listing - [select for diffs]
Modified Thu Oct 28 22:34:01 2004 UTC (19 years, 8 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1653 , to selected 1724

More work on StuntDouble, Atom, DirectionalAtom and RigidBody

Revision 1653 - Directory Listing - [select for diffs]
Modified Wed Oct 27 00:01:29 2004 UTC (19 years, 8 months ago) by gezelter
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1650 , to selected 1724

char* -> string

Revision 1650 - Directory Listing - [select for diffs]
Modified Tue Oct 26 22:24:52 2004 UTC (19 years, 8 months ago) by gezelter
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1648 , to selected 1724

forcefield refactoring for shapes

Revision 1648 - Directory Listing - [select for diffs]
Modified Tue Oct 26 22:19:22 2004 UTC (19 years, 8 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1645 , to selected 1724

DataStorage passes unit test

Revision 1645 - Directory Listing - [select for diffs]
Modified Tue Oct 26 17:28:53 2004 UTC (19 years, 8 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1642 , to selected 1724

Snaphot and SnapshotTestCase in progress

Revision 1642 - Directory Listing - [select for diffs]
Modified Mon Oct 25 04:08:14 2004 UTC (19 years, 8 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1639 , to selected 1724

more classes get reconstructed

Revision 1639 - Directory Listing - [select for diffs]
Modified Fri Oct 22 23:09:57 2004 UTC (19 years, 8 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1636 , to selected 1724

more work in Snapshot

Revision 1636 - Directory Listing - [select for diffs]
Modified Fri Oct 22 22:54:01 2004 UTC (19 years, 8 months ago) by chrisfen
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1634 , to selected 1724

fixey fixey the breakey breakey

Revision 1634 - Directory Listing - [select for diffs]
Modified Fri Oct 22 21:21:02 2004 UTC (19 years, 8 months ago) by gezelter
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1630 , to selected 1724

fixey fixey

Revision 1630 - Directory Listing - [select for diffs]
Modified Thu Oct 21 21:31:39 2004 UTC (19 years, 8 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1628 , to selected 1724

Snapshot and SnapshotManager in progress

Revision 1628 - Directory Listing - [select for diffs]
Modified Thu Oct 21 20:15:31 2004 UTC (19 years, 8 months ago) by gezelter
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1625 , to selected 1724

Breaky Breaky.   Fixey Fixey.

Revision 1625 - Directory Listing - [select for diffs]
Modified Thu Oct 21 16:22:01 2004 UTC (19 years, 8 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1619 , to selected 1724

replace old GebericData with  new GenericData

Revision 1619 - Directory Listing - [select for diffs]
Modified Wed Oct 20 21:16:01 2004 UTC (19 years, 8 months ago) by chuckv
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1617 , to selected 1724

Fortran/C++ interface de-obfuscation project appears to be complete!  Woo hoo!

Revision 1617 - Directory Listing - [select for diffs]
Modified Wed Oct 20 20:46:20 2004 UTC (19 years, 8 months ago) by chuckv
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1615 , to selected 1724

Fortran/C++ interface de-obfuscation project (It is a very long story)

Revision 1615 - Directory Listing - [select for diffs]
Modified Wed Oct 20 05:52:25 2004 UTC (19 years, 9 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1614 , to selected 1724

Snapshot and SnapshotManager in design phase

Revision 1614 - Directory Listing - [select for diffs]
Modified Wed Oct 20 04:55:21 2004 UTC (19 years, 9 months ago) by gezelter
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1592 , to selected 1724

namespace problem prevented linking

Revision 1592 - Directory Listing - [select for diffs]
Modified Mon Oct 18 17:07:27 2004 UTC (19 years, 9 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1531 , to selected 1724

fix some bugs in Quaternion class

Revision 1531 - Directory Listing - [select for diffs]
Modified Wed Oct 6 19:51:54 2004 UTC (19 years, 9 months ago) by gezelter
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1513 , to selected 1724

Cleaning up a bit

Revision 1513 - Directory Listing - [select for diffs]
Modified Wed Sep 29 21:55:03 2004 UTC (19 years, 9 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1503 , to selected 1724

define DEV_ROOT as relative path

Revision 1503 - Directory Listing - [select for diffs]
Modified Wed Sep 29 14:59:25 2004 UTC (19 years, 9 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1498 , to selected 1724

change Makefile to relative path

Revision 1498 - Directory Listing - [select for diffs]
Modified Tue Sep 28 21:08:18 2004 UTC (19 years, 9 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1497 , to selected 1724

move fortran files around to solve dependency problem

Revision 1497 - Directory Listing - [select for diffs]
Modified Tue Sep 28 20:44:02 2004 UTC (19 years, 9 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1492 , to selected 1724

*** empty log message ***

Revision 1492 - Directory Listing - [select for diffs]
Modified Fri Sep 24 16:27:58 2004 UTC (19 years, 9 months ago) by tim
Original Path: trunk/OOPSE-3.0/src/brains
Diff to previous 1490 , to selected 1724

change the #include in source files

Revision 1490 - Directory Listing - [select for diffs]
Added Fri Sep 24 04:16:43 2004 UTC (19 years, 9 months ago) by gezelter
Original Path: trunk/OOPSE-3.0/src/brains
Diff to selected 1724

Import of OOPSE v. 2.0

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