Molecule, Atom, DirectionalAtom, RigidBody and StuntDouble classes get compiled
This commit was manufactured by cvs2svn to create branch 'new_design'.
add getArray function to RectMatrix and Vector classes
Snapshot and SnapshotManager in progress
fix some bugs in Quaternion class
Working on getting Shapes into OOPSE
math library in progress
refactory vector and matrix classes
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