io get built, next is integrator
StringTokenizer passes unit test
add PolynomialBondType, PolynomialBendType, PolynomialTorsionType, HarmonicBendType and CharmmTorsionType. Need to refine the design and add document for them
finish DumpReader, DumpWriter.Next Step is LJFF and integrators
bug fix in hasMoreTokens
adding StringUtils, a c-style strtok like class, need unit test
Molecule, Atom, DirectionalAtom, RigidBody and StuntDouble classes get compiled
This commit was manufactured by cvs2svn to create branch 'new_design'.
more tests on math library
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