# | Line 22 | Line 22 | using namespace std; | |
---|---|---|
22 | #define HARMONIC_BOND 1 | |
23 | ||
24 | ||
25 | < | namespace TPE { // restrict the access of the folowing to this file only. |
25 | > | namespace DUFF_NS { // restrict the access of the folowing to this file only. |
26 | ||
27 | ||
28 | // Declare the structures that will be passed by MPI | |
# | Line 420 | Line 420 | namespace TPE { // restrict the access of the folowin | |
420 | ||
421 | } // namespace | |
422 | ||
423 | < | using namespace TPE; |
423 | > | using namespace DUFF_NS; |
424 | ||
425 | ||
426 | //**************************************************************** | |
# | Line 1408 | Line 1408 | void DUFF::fastForward( char* stopText, char* searchOw | |
1408 | } | |
1409 | ||
1410 | ||
1411 | < | int TPE::parseAtom( char *lineBuffer, int lineNum, atomStruct &info ){ |
1411 | > | int DUFF_NS::parseAtom( char *lineBuffer, int lineNum, atomStruct &info ){ |
1412 | ||
1413 | char* the_token; | |
1414 | ||
# | Line 1502 | Line 1502 | int TPE::parseAtom( char *lineBuffer, int lineNum, ato | |
1502 | else return 0; | |
1503 | } | |
1504 | ||
1505 | < | int TPE::parseBond( char *lineBuffer, int lineNum, bondStruct &info ){ |
1505 | > | int DUFF_NS::parseBond( char *lineBuffer, int lineNum, bondStruct &info ){ |
1506 | ||
1507 | char* the_token; | |
1508 | char bondType[30]; | |
# | Line 1579 | Line 1579 | int TPE::parseBond( char *lineBuffer, int lineNum, bon | |
1579 | } | |
1580 | ||
1581 | ||
1582 | < | int TPE::parseBend( char *lineBuffer, int lineNum, bendStruct &info ){ |
1582 | > | int DUFF_NS::parseBend( char *lineBuffer, int lineNum, bendStruct &info ){ |
1583 | ||
1584 | char* the_token; | |
1585 | ||
# | Line 1667 | Line 1667 | int TPE::parseBend( char *lineBuffer, int lineNum, ben | |
1667 | else return 0; | |
1668 | } | |
1669 | ||
1670 | < | int TPE::parseTorsion( char *lineBuffer, int lineNum, torsionStruct &info ){ |
1670 | > | int DUFF_NS::parseTorsion( char *lineBuffer, int lineNum, torsionStruct &info ){ |
1671 | ||
1672 | char* the_token; | |
1673 |
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