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Revision 3762 by skuang, Fri Sep 23 20:12:12 2011 UTC vs.
Revision 3763 by skuang, Tue Sep 27 21:02:48 2011 UTC

# Line 143 | Line 143 | properties. {\bf To our knowledge, no previous MD inve
143   The work presented here deals with the Au(111) surface covered to
144   varying degrees by butanethiol, a capping agent with short carbon
145   chain, and solvated with organic solvents of different molecular
146 < properties. {\bf To our knowledge, no previous MD inverstigations have
147 <  been found to address to these systems yet.} Different models were
148 < used for both the capping agent and the solvent force field
146 > properties. {\bf To our knowledge, few previous MD inverstigations
147 >  have been found to address to these systems yet.} Different models
148 > were used for both the capping agent and the solvent force field
149   parameters. Using the NIVS algorithm, the thermal transport across
150   these interfaces was studied and the underlying mechanism for the
151   phenomena was investigated.
# Line 844 | Line 844 | a simulation.  Since the interface persisted in these
844   surfaces 90\% covered by butanethiols, but did not see this above
845   phenomena even at $\langle T\rangle\sim$300K.  That said, we did
846   observe butanethiols migrating to neighboring three-fold sites during
847 < a simulation.  Since the interface persisted in these simulations,
847 > a simulation.  Since the interface persisted in these simulations, we
848   were able to obtain $G$'s for these interfaces even at a relatively
849   high temperature without being affected by surface reconstructions.
850  
# Line 888 | Line 888 | interfaces.
888   surface Au layer to the capping agents. Therefore, in our simulations,
889   the Au / S interfaces do not appear to be the primary barrier to
890   thermal transport when compared with the butanethiol / solvent
891 < interfaces.
891 > interfaces. {\bf This confirms the results from Luo {\it et
892 >    al.}\cite{Luo20101}, which reported $G$ for Au-SAM junctions
893 >  generally twice larger than what we have computed for the
894 >  thiol-liquid interfaces.}
895  
896   \begin{figure}
897   \includegraphics[width=\linewidth]{vibration}
# Line 914 | Line 917 | in the UA force field.
917   vibrations were treated classically.  The presence of extra degrees of
918   freedom in the AA force field yields higher heat exchange rates
919   between the two phases and results in a much higher conductivity than
920 < in the UA force field.
920 > in the UA force field. {\bf Due to the classical models used, this
921 >  even includes those high frequency modes which should be unpopulated
922 >  at our relatively low temperatures. This artifact causes high
923 >  frequency vibrations accountable for thermal transport in classical
924 >  MD simulations.}
925  
926   The similarity in the vibrational modes available to solvent and
927   capping agent can be reduced by deuterating one of the two components

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