This commit was manufactured by cvs2svn to create tag 'no_segfault-01'.
Fixes in MPI force calc and in Trappe_Ex parsing.
fixed a bug where the Excludes were not being created properly
fixed a bug where excludes were not being initialized
fixed the compile time bugs, Source builds and links
bug fixes many bug fixes
fixed a couple of the "static" bugs in Atom and Exclude
still working on the SimSetup routine. also fixed some things in Exclude.hpp
Fixes in Atom and Exclude list
added an Exclude class with static arrays similar to the Atom class
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