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1 gezelter 4007 %% This BibTeX bibliography file was created using BibDesk.
2     %% http://bibdesk.sourceforge.net/
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5 gezelter 4042 %% Created for Dan Gezelter at 2014-02-21 13:37:01 -0500
6 gezelter 4007
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8     %% Saved with string encoding Unicode (UTF-8)
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10    
11    
12 gezelter 4042 @article{Berne:1972pb,
13     Author = {Berne, Bruce J. and Pechukas, Philip},
14     Date-Added = {2014-02-21 18:28:49 +0000},
15     Date-Modified = {2014-02-21 18:28:49 +0000},
16     Doi = {http://dx.doi.org/10.1063/1.1677837},
17     Journal = {The Journal of Chemical Physics},
18     Number = {8},
19     Pages = {4213-4216},
20     Title = {Gaussian Model Potentials for Molecular Interactions},
21     Url = {http://scitation.aip.org/content/aip/journal/jcp/56/8/10.1063/1.1677837},
22     Volume = {56},
23     Year = {1972},
24     Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/56/8/10.1063/1.1677837},
25     Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.1677837}}
26    
27     @article{Luckhurst:1990fy,
28     Author = {Luckhurst, G. R. and Stephens, R. A. and Phippen, R. W.},
29     Date-Added = {2014-02-21 18:27:10 +0000},
30     Date-Modified = {2014-02-21 18:27:10 +0000},
31     Doi = {10.1080/02678299008047361},
32     Eprint = {http://www.tandfonline.com/doi/pdf/10.1080/02678299008047361},
33     Journal = {Liquid Crystals},
34     Number = {4},
35     Pages = {451-464},
36     Title = {Computer simulation studies of anisotropic systems. XIX. Mesophases formed by the Gay-Berne model mesogen},
37     Url = {http://www.tandfonline.com/doi/abs/10.1080/02678299008047361},
38     Volume = {8},
39     Year = {1990},
40     Bdsk-Url-1 = {http://www.tandfonline.com/doi/abs/10.1080/02678299008047361},
41     Bdsk-Url-2 = {http://dx.doi.org/10.1080/02678299008047361}}
42    
43     @article{Auer:2007dp,
44     Abstract = {We present improvements on our previous approaches for calculating vibrational spectroscopy observables for the OH stretch region of dilute HOD in liquid D2O. These revised approaches are implemented to calculate IR and isotropic Raman spectra, using the SPC/E simulation model, and the results are in good agreement with experiment. We also calculate observables associated with three-pulse IR echoes: the peak shift and 2D-IR spectrum. The agreement with experiment for the former is improved over our previous calculations, but discrepancies between theory and experiment still exist. Using our proposed definition for hydrogen bonding in liquid water, we decompose the distribution of frequencies in the OH stretch region in terms of subensembles of HOD molecules with different local hydrogen-bonding environments. Such a decomposition allows us to make the connection with experiments and calculations on water clusters and more generally to understand the extent of the relationship between transition frequency and local structure in the liquid.},
45     Author = {Auer, B. and Kumar, R. and Schmidt, J. R. and Skinner, J. L.},
46     Date-Added = {2014-02-21 18:20:31 +0000},
47     Date-Modified = {2014-02-21 18:31:54 +0000},
48     Doi = {10.1073/pnas.0701482104},
49     Eprint = {http://www.pnas.org/content/104/36/14215.full.pdf+html},
50     Journal = {Proceedings of the National Academy of Sciences},
51     Number = {36},
52     Pages = {14215-14220},
53     Title = {Hydrogen bonding and Raman, IR, and 2D-IR spectroscopy of dilute \ce{HOD} in liquid \ce{D2O}},
54     Url = {http://www.pnas.org/content/104/36/14215.abstract},
55     Volume = {104},
56     Year = {2007},
57     Bdsk-Url-1 = {http://www.pnas.org/content/104/36/14215.abstract},
58     Bdsk-Url-2 = {http://dx.doi.org/10.1073/pnas.0701482104}}
59    
60     @article{Corcelli:2004ai,
61     Author = {Corcelli, S. A. and Lawrence, C. P. and Skinner, J. L.},
62     Date-Added = {2014-02-21 18:18:50 +0000},
63     Date-Modified = {2014-02-21 18:32:22 +0000},
64     Doi = {http://dx.doi.org/10.1063/1.1683072},
65     Journal = {The Journal of Chemical Physics},
66     Number = {17},
67     Pages = {8107-8117},
68     Title = {Combined electronic structure/molecular dynamics approach for ultrafast infrared spectroscopy of dilute \ce{HOD} in liquid \ce{H2O} and \ce{D2O}},
69     Url = {http://scitation.aip.org/content/aip/journal/jcp/120/17/10.1063/1.1683072},
70     Volume = {120},
71     Year = {2004},
72     Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/120/17/10.1063/1.1683072},
73     Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.1683072}}
74    
75     @article{Morales:2009fp,
76     Author = {Morales, Christine M. and Thompson, Ward H.},
77     Date-Added = {2014-02-21 17:59:53 +0000},
78     Date-Modified = {2014-02-21 18:33:21 +0000},
79     Doi = {10.1021/jp8072969},
80     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp8072969},
81     Journal = {The Journal of Physical Chemistry A},
82     Note = {PMID: 19061371},
83     Number = {10},
84     Pages = {1922-1933},
85     Title = {Simulations of Infrared Spectra of Nanoconfined Liquids: Acetonitrile Confined in Nanoscale, Hydrophilic Silica Pores},
86     Url = {http://pubs.acs.org/doi/abs/10.1021/jp8072969},
87     Volume = {113},
88     Year = {2009},
89     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp8072969},
90     Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp8072969}}
91    
92 gezelter 4040 @article{Bose:2012eu,
93     Author = {Bose, Tushar Kanti and Saha, Jayashree},
94     Date-Added = {2014-02-21 14:00:07 +0000},
95     Date-Modified = {2014-02-21 14:00:07 +0000},
96     Doi = {10.1103/PhysRevE.86.050701},
97     Issue = {5},
98     Journal = {Phys. Rev. E},
99     Month = {Nov},
100     Numpages = {4},
101     Pages = {050701},
102     Publisher = {American Physical Society},
103     Title = {Origin of tilted-phase generation in systems of ellipsoidal molecules with dipolar interactions},
104     Url = {http://link.aps.org/doi/10.1103/PhysRevE.86.050701},
105     Volume = {86},
106     Year = {2012},
107     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.86.050701},
108     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.86.050701}}
109    
110 gezelter 4036 @article{FILLER:1964yg,
111     Abstract = {An interpolation formula is derived which gives an apodized spectrum as the convolution of the unapodized spectrum (sampled at suitable points) with the apodized apparatus function. This allows many apodizations to be applied to a single interferogram with the performance of only a single Fourier transformation. A further saving in computation effort is possible if the apodized apparatus function decays rapidly away from its center. Examples of such cases are presented, where the interferogram is weighted by a function which is a cosine series of only a few terms.},
112 gezelter 4042 Author = {A. S. Filler},
113 gezelter 4036 Date-Added = {2014-02-20 18:13:39 +0000},
114 gezelter 4042 Date-Modified = {2014-02-21 18:31:22 +0000},
115 gezelter 4036 Doi = {10.1364/JOSA.54.000762},
116     Journal = {J. Opt. Soc. Am.},
117     Month = {Jun},
118     Number = {6},
119     Pages = {762--764},
120     Publisher = {OSA},
121     Title = {Apodization and Interpolation in Fourier-Transform Spectroscopy},
122     Url = {http://www.opticsinfobase.org/abstract.cfm?URI=josa-54-6-762},
123     Volume = {54},
124     Year = {1964},
125     Bdsk-Url-1 = {http://www.opticsinfobase.org/abstract.cfm?URI=josa-54-6-762},
126     Bdsk-Url-2 = {http://dx.doi.org/10.1364/JOSA.54.000762}}
127    
128     @article{Naylor:2007rm,
129     Abstract = {Apodizing functions are used in Fourier transform spectroscopy (FTS) to reduce the magnitude of the sidelobes in the instrumental line shape (ILS), which are a direct result of the finite maximum optical path difference in the measured interferogram. Three apodizing functions, which are considered optimal in the sense of producing the smallest loss in spectral resolution for a given reduction in the magnitude of the largest sidelobe, find frequent use in FTS \[J. Opt. Soc. Am.66, 259 (1976)\]. We extend this series to include optimal apodizing functions corresponding to increases in the width of the ILS ranging from factors of 1.1 to 2.0 compared with its unapodized value, and we compare the results with other commonly used apodizing functions.},
130     Author = {David A. Naylor and Margaret K. Tahic},
131     Date-Added = {2014-02-20 16:45:24 +0000},
132     Date-Modified = {2014-02-20 16:45:24 +0000},
133     Doi = {10.1364/JOSAA.24.003644},
134     Journal = {J. Opt. Soc. Am. A},
135     Keywords = {Linewidth; Spectroscopy, Fourier transforms},
136     Month = {Nov},
137     Number = {11},
138     Pages = {3644--3648},
139     Publisher = {OSA},
140     Title = {Apodizing functions for Fourier transform spectroscopy},
141     Url = {http://josaa.osa.org/abstract.cfm?URI=josaa-24-11-3644},
142     Volume = {24},
143     Year = {2007},
144     Bdsk-Url-1 = {http://josaa.osa.org/abstract.cfm?URI=josaa-24-11-3644},
145     Bdsk-Url-2 = {http://dx.doi.org/10.1364/JOSAA.24.003644}}
146    
147 gezelter 4035 @article{Morse:1929xy,
148     Author = {Morse, Philip M.},
149     Date-Added = {2014-02-19 21:18:41 +0000},
150     Date-Modified = {2014-02-19 21:18:43 +0000},
151     Doi = {10.1103/PhysRev.34.57},
152     Issue = {1},
153     Journal = {Phys. Rev.},
154     Month = {Jul},
155     Numpages = {0},
156     Pages = {57--64},
157     Publisher = {American Physical Society},
158     Title = {Diatomic Molecules According to the Wave Mechanics. II. Vibrational Levels},
159     Url = {http://link.aps.org/doi/10.1103/PhysRev.34.57},
160     Volume = {34},
161     Year = {1929},
162     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRev.34.57},
163     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRev.34.57}}
164    
165     @article{Lee:1988qf,
166     Author = {Lee, Chengteh and Yang, Weitao and Parr, Robert G.},
167     Date-Added = {2014-02-19 21:03:16 +0000},
168     Date-Modified = {2014-02-19 21:03:19 +0000},
169     Doi = {10.1103/PhysRevB.37.785},
170     Issue = {2},
171     Journal = {Phys. Rev. B},
172     Month = {Jan},
173     Numpages = {0},
174     Pages = {785--789},
175     Publisher = {American Physical Society},
176     Title = {Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density},
177     Url = {http://link.aps.org/doi/10.1103/PhysRevB.37.785},
178     Volume = {37},
179     Year = {1988},
180     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevB.37.785},
181     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevB.37.785}}
182    
183     @article{Becke:1993kq,
184     Author = {Becke, Axel D.},
185     Date-Added = {2014-02-19 21:02:30 +0000},
186 gezelter 4042 Date-Modified = {2014-02-21 18:30:55 +0000},
187 gezelter 4035 Doi = {http://dx.doi.org/10.1063/1.464913},
188     Journal = {The Journal of Chemical Physics},
189     Number = {7},
190     Pages = {5648-5652},
191 gezelter 4042 Title = {Density-functional thermochemistry. III. The role of exact exchange},
192 gezelter 4035 Url = {http://scitation.aip.org/content/aip/journal/jcp/98/7/10.1063/1.464913},
193     Volume = {98},
194     Year = {1993},
195     Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/98/7/10.1063/1.464913},
196     Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.464913}}
197    
198 gezelter 4028 @book{Collings:1997rz,
199     Author = {Collings, P.J. and Hird, M.},
200     Date-Added = {2014-02-18 21:05:20 +0000},
201     Date-Modified = {2014-02-18 21:05:20 +0000},
202     Isbn = {9780203211199},
203     Publisher = {Taylor \& Francis},
204     Series = {Liquid Crystals Book Series},
205     Title = {Introduction to Liquid Crystals: Chemistry and Physics},
206     Url = {http://books.google.com/books?id=GBeDkKpZ5VQC},
207     Year = {1997},
208     Bdsk-Url-1 = {http://books.google.com/books?id=GBeDkKpZ5VQC}}
209    
210     @article{Cleaver:1996rt,
211     Author = {Cleaver, Douglas J. and Care, Christopher M. and Allen, Michael P. and Neal, Maureen P.},
212     Date-Added = {2014-02-18 21:01:40 +0000},
213     Date-Modified = {2014-02-18 21:01:42 +0000},
214     Doi = {10.1103/PhysRevE.54.559},
215     Issue = {1},
216     Journal = {Phys. Rev. E},
217     Month = {Jul},
218     Numpages = {0},
219     Pages = {559--567},
220     Publisher = {American Physical Society},
221     Title = {Extension and generalization of the Gay-Berne potential},
222     Url = {http://link.aps.org/doi/10.1103/PhysRevE.54.559},
223     Volume = {54},
224     Year = {1996},
225     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.54.559},
226     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.54.559}}
227    
228     @article{Kushick:1976xy,
229     Author = {Kushick, J. and Berne, Bruce J.},
230     Date-Added = {2014-02-18 21:00:21 +0000},
231     Date-Modified = {2014-02-18 21:00:21 +0000},
232     Doi = {http://dx.doi.org/10.1063/1.432403},
233     Journal = {The Journal of Chemical Physics},
234     Number = {4},
235     Pages = {1362-1367},
236     Title = {Computer simulation of anisotropic molecular fluids},
237     Url = {http://scitation.aip.org/content/aip/journal/jcp/64/4/10.1063/1.432403},
238     Volume = {64},
239     Year = {1976},
240     Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/64/4/10.1063/1.432403},
241     Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.432403}}
242    
243     @article{Gay:1981yu,
244     Author = {Gay, J. G. and Berne, B. J.},
245     Date-Added = {2014-02-18 20:57:16 +0000},
246     Date-Modified = {2014-02-18 20:57:16 +0000},
247     Doi = {http://dx.doi.org/10.1063/1.441483},
248     Journal = {The Journal of Chemical Physics},
249     Number = {6},
250     Pages = {3316-3319},
251     Title = {Modification of the overlap potential to mimic a linear site--site potential},
252     Url = {http://scitation.aip.org/content/aip/journal/jcp/74/6/10.1063/1.441483},
253     Volume = {74},
254     Year = {1981},
255     Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/74/6/10.1063/1.441483},
256     Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.441483}}
257    
258     @article{Choi:2008cr,
259     Author = {Choi, Jun-Ho and Oh, Kwang-Im and Lee, Hochan and Lee, Chewook and Cho, Minhaeng},
260     Date-Added = {2014-02-18 18:20:28 +0000},
261 gezelter 4042 Date-Modified = {2014-02-21 18:34:13 +0000},
262 gezelter 4028 Doi = {http://dx.doi.org/10.1063/1.2844787},
263     Eid = 134506,
264     Journal = {The Journal of Chemical Physics},
265     Number = {13},
266 gezelter 4042 Pages = {134506},
267 gezelter 4028 Title = {Nitrile and thiocyanate IR probes: Quantum chemistry calculation studies and multivariate least-square fitting analysis},
268     Url = {http://scitation.aip.org/content/aip/journal/jcp/128/13/10.1063/1.2844787},
269     Volume = {128},
270     Year = {2008},
271     Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/128/13/10.1063/1.2844787},
272     Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.2844787}}
273    
274     @article{Fafarman:2010dq,
275     Author = {Fafarman, Aaron T. and Sigala, Paul A. and Herschlag, Daniel and Boxer, Steven G.},
276     Date-Added = {2014-02-18 18:13:20 +0000},
277     Date-Modified = {2014-02-18 18:13:20 +0000},
278     Doi = {10.1021/ja104573b},
279     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/ja104573b},
280     Journal = {Journal of the American Chemical Society},
281     Number = {37},
282     Pages = {12811-12813},
283     Title = {Decomposition of Vibrational Shifts of Nitriles into Electrostatic and Hydrogen-Bonding Effects},
284     Url = {http://pubs.acs.org/doi/abs/10.1021/ja104573b},
285     Volume = {132},
286     Year = {2010},
287     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/ja104573b},
288     Bdsk-Url-2 = {http://dx.doi.org/10.1021/ja104573b}}
289    
290     @article{Lindquist:2008bh,
291     Author = {Lindquist, Beth A. and Haws, Ryan T. and Corcelli, Steven A.},
292     Date-Added = {2014-02-18 16:27:15 +0000},
293     Date-Modified = {2014-02-18 16:27:15 +0000},
294     Doi = {10.1021/jp804900u},
295     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp804900u},
296     Journal = {The Journal of Physical Chemistry B},
297     Note = {PMID: 18855431},
298     Number = {44},
299     Pages = {13991-14001},
300     Title = {Optimized Quantum Mechanics/Molecular Mechanics Strategies for Nitrile Vibrational Probes: Acetonitrile and para-Tolunitrile in Water and Tetrahydrofuran},
301     Url = {http://pubs.acs.org/doi/abs/10.1021/jp804900u},
302     Volume = {112},
303     Year = {2008},
304     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp804900u},
305     Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp804900u}}
306    
307     @article{Lindquist:2008qf,
308     Author = {Lindquist, Beth A. and Corcelli, Steven A.},
309     Date-Added = {2014-02-18 16:26:29 +0000},
310 gezelter 4042 Date-Modified = {2014-02-21 18:05:15 +0000},
311 gezelter 4028 Doi = {10.1021/jp802039e},
312     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp802039e},
313     Journal = {The Journal of Physical Chemistry B},
314     Note = {PMID: 18438998},
315     Number = {20},
316     Pages = {6301-6303},
317 gezelter 4042 Title = {Nitrile Groups as Vibrational Probes: Calculations of the CN Infrared Absorption Line Shape of Acetonitrile in Water and Tetrahydrofuran},
318 gezelter 4028 Url = {http://pubs.acs.org/doi/abs/10.1021/jp802039e},
319     Volume = {112},
320     Year = {2008},
321     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp802039e},
322     Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp802039e}}
323    
324     @article{Waegele:2010ve,
325     Author = {Waegele, Matthias M. and Gai, Feng},
326     Date-Added = {2014-02-18 16:24:37 +0000},
327     Date-Modified = {2014-02-18 16:24:37 +0000},
328     Doi = {10.1021/jz900429z},
329     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jz900429z},
330     Journal = {The Journal of Physical Chemistry Letters},
331     Number = {4},
332     Pages = {781-786},
333     Title = {Computational Modeling of the Nitrile Stretching Vibration of 5-Cyanoindole in Water},
334     Url = {http://pubs.acs.org/doi/abs/10.1021/jz900429z},
335     Volume = {1},
336     Year = {2010},
337     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jz900429z},
338     Bdsk-Url-2 = {http://dx.doi.org/10.1021/jz900429z}}
339    
340     @article{Leyte:1997zl,
341     Abstract = {Time-resolved (TR) spectra of 5CB in the millisecond domain were obtained during excitation with electric fields of different time dependence: ac, dc, and ac $+$ dc. The response to ac excitation occurs mainly at twice the modulating frequency. The effect of the addition of dc to an ac field is the induction of an additional response at the ac frequency. The additional 'single frequency' response persists indefinitely, even though the response to the application of only a permanent dc field relaxes within roughly 200 ms. The amplitude of the oscillating responses diminishes with increasing ac frequency. This result is in accordance with the expected response to the torque exerted by the ac field. Different functional group absorptions respond without a significant phase difference in this time scale.},
342     Author = {J. C. Leyte and P. C. M. Van Woerkom},
343     Date-Added = {2014-02-18 16:19:03 +0000},
344 gezelter 4042 Date-Modified = {2014-02-21 18:35:10 +0000},
345 gezelter 4028 Journal = {Appl. Spectrosc.},
346     Month = {Nov},
347     Number = {11},
348     Pages = {1711--1714},
349     Publisher = {OSA},
350 gezelter 4042 Title = {FT-IR TRS of Liquid Crystalline 5CB in AC, DC, and AC $+$ DC Electric Fields},
351 gezelter 4028 Url = {http://as.osa.org/abstract.cfm?URI=as-51-11-1711},
352     Volume = {51},
353     Year = {1997},
354     Bdsk-Url-1 = {http://as.osa.org/abstract.cfm?URI=as-51-11-1711}}
355    
356     @article{Moreno-Razo:2012rz,
357     Annote = {10.1038/nature11084},
358     Author = {Moreno-Razo, J. A. and Sambriski, E. J. and Abbott, N. L. and Hernandez-Ortiz, J. P. and de Pablo, J. J.},
359     Date = {2012/05/03/print},
360     Date-Added = {2014-02-18 16:07:15 +0000},
361     Date-Modified = {2014-02-18 16:07:15 +0000},
362     Day = {03},
363     Isbn = {0028-0836},
364     Journal = {Nature},
365     L3 = {http://www.nature.com/nature/journal/v485/n7396/abs/nature11084.html#supplementary-information},
366     M3 = {10.1038/nature11084},
367     Month = {05},
368     Number = {7396},
369     Pages = {86--89},
370     Publisher = {Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.},
371     Title = {Liquid-crystal-mediated self-assembly at nanodroplet interfaces},
372     Ty = {JOUR},
373     Url = {http://dx.doi.org/10.1038/nature11084},
374     Volume = {485},
375     Year = {2012},
376     Bdsk-Url-1 = {http://dx.doi.org/10.1038/nature11084}}
377    
378     @article{Schkolnik:2012ty,
379     Author = {Schkolnik, Gal and Salewski, Johannes and Millo, Diego and Zebger, Ingo and Franzen, Stefan and Hildebrandt, Peter},
380     Date-Added = {2014-02-18 15:43:30 +0000},
381     Date-Modified = {2014-02-18 15:43:30 +0000},
382     Doi = {10.3390/ijms13067466},
383     Issn = {1422-0067},
384     Journal = {International Journal of Molecular Sciences},
385     Number = {6},
386     Pages = {7466--7482},
387     Pubmedid = {22837705},
388     Title = {Vibrational Stark Effect of the Electric-Field Reporter 4-Mercaptobenzonitrile as a Tool for Investigating Electrostatics at Electrode/SAM/Solution Interfaces},
389     Url = {http://www.mdpi.com/1422-0067/13/6/7466},
390     Volume = {13},
391     Year = {2012},
392     Bdsk-Url-1 = {http://www.mdpi.com/1422-0067/13/6/7466},
393     Bdsk-Url-2 = {http://dx.doi.org/10.3390/ijms13067466}}
394    
395     @article{Andrews:2000qv,
396     Author = {Andrews, Steven S. and Boxer, Steven G.},
397     Date-Added = {2014-02-18 15:39:01 +0000},
398     Date-Modified = {2014-02-18 15:39:01 +0000},
399     Doi = {10.1021/jp002242r},
400     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp002242r},
401     Journal = {The Journal of Physical Chemistry A},
402     Number = {51},
403     Pages = {11853-11863},
404     Title = {Vibrational Stark Effects of Nitriles I. Methods and Experimental Results},
405     Url = {http://pubs.acs.org/doi/abs/10.1021/jp002242r},
406     Volume = {104},
407     Year = {2000},
408     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp002242r},
409     Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp002242r}}
410    
411     @article{Oklejas:2002uq,
412     Author = {Oklejas, Vanessa and Sjostrom, Chris and Harris, Joel M.},
413     Date-Added = {2014-02-18 15:24:01 +0000},
414     Date-Modified = {2014-02-18 15:24:01 +0000},
415     Doi = {10.1021/ja017656s},
416     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/ja017656s},
417     Journal = {Journal of the American Chemical Society},
418     Number = {11},
419     Pages = {2408-2409},
420     Title = {SERS Detection of the Vibrational Stark Effect from Nitrile-Terminated SAMs to Probe Electric Fields in the Diffuse Double-Layer},
421     Url = {http://pubs.acs.org/doi/abs/10.1021/ja017656s},
422     Volume = {124},
423     Year = {2002},
424     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/ja017656s},
425     Bdsk-Url-2 = {http://dx.doi.org/10.1021/ja017656s}}
426    
427     @article{Lindquist:2009fk,
428     Abstract = {This paper presents an overview of recent experiments and theoretical developments aimed at using vibrational spectroscopy to understand the structure and dynamics of nitrile-labeled biomolecules. Nitrile groups are excellent vibrational probes of proteins and DNA because they absorb in a region of the spectrum that is relatively free of absorption due to the biomolecule{,} and they have high extinction coefficients. The vibrational frequency of nitrile groups is also extraordinarily sensitive to its local environment{,} and thus C[triple bond{,} length as m-dash]N bonds have been employed in both linear and 2-D infrared (IR) spectroscopy experiments and also as vibrational Stark probes of electric fields in proteins. The interpretation and design of these experiments would be enhanced by accurate calculations of IR spectra from molecular dynamics simulations. Recently{,} theoretical developments towards computing the vibrational spectrum of nitrile groups in the condensed-phase have been highly successful. A strong synergy between experiment and theory will further promote the use of vibrational spectroscopy of nitrile-labeled biomolecules to address fundamental questions of structure and dynamics that are elusive to other techniques.},
429     Author = {Lindquist, Beth A. and Furse, Kristina E. and Corcelli, Steven A.},
430     Date-Added = {2014-02-18 15:16:38 +0000},
431     Date-Modified = {2014-02-18 15:16:38 +0000},
432     Doi = {10.1039/B908588B},
433     Issue = {37},
434     Journal = {Phys. Chem. Chem. Phys.},
435     Pages = {8119-8132},
436     Publisher = {The Royal Society of Chemistry},
437     Title = {Nitrile groups as vibrational probes of biomolecular structure and dynamics: an overview},
438     Url = {http://dx.doi.org/10.1039/B908588B},
439     Volume = {11},
440     Year = {2009},
441     Bdsk-Url-1 = {http://dx.doi.org/10.1039/B908588B}}
442    
443 gezelter 4027 @article{Meineke05,
444     Author = {M.~A. Meineke and C.~F. {Vardeman II} and T. Lin and C.~J. Fennell and J.~D. Gezelter},
445     Date-Added = {2014-02-14 19:21:43 +0000},
446     Date-Modified = {2014-02-14 19:21:43 +0000},
447     Journal = {J. Comp. Chem.},
448     Pages = {252-271},
449     Title = {$\mbox{OOPSE: A}$n Open Source Object-Oriented Parallel Simulation Engine for Molecular Dynamics},
450     Volume = 26,
451     Year = 2005}
452    
453     @article{Fennell:2006zl,
454     Abstract = {We investigate pairwise electrostatic interaction methods and show that there are viable computationally efficient (O(N)) alternatives to the Ewald summation for typical modern molecular simulations. These methods are extended from the damped and cutoff-neutralized Coulombic sum originally proposed by Wolf [J. Chem. Phys. 110, 8255 (1999)]. One of these, the damped shifted force method, shows a remarkable ability to reproduce the energetic and dynamic characteristics exhibited by simulations employing lattice summation techniques. Comparisons were performed with this and other pairwise methods against the smooth particle-mesh Ewald summation to see how well they reproduce the energetics and dynamics of a variety of molecular simulations. (c) 2006 American Institute of Physics.},
455     Address = {CIRCULATION \& FULFILLMENT DIV, 2 HUNTINGTON QUADRANGLE, STE 1 N O 1, MELVILLE, NY 11747-4501 USA},
456     Author = {Fennell, Christopher~J. and Gezelter, J.~Daniel},
457     Date = {JUN 21 2006},
458     Date-Added = {2014-02-14 19:21:36 +0000},
459     Date-Modified = {2014-02-14 19:21:36 +0000},
460     Doi = {ARTN 234104},
461     Journal = jcp,
462     Publisher = {AMER INST PHYSICS},
463     Timescited = {15},
464     Title = {Is the {E}wald summation still necessary? Pairwise alternatives to the accepted standard for long-range electrostatics},
465     Volume = {124},
466     Year = {2006},
467     Bdsk-Url-1 = {http://dx.doi.org/234104}}
468    
469 jmarr 4025 @article{PhysRevLett.111.227801,
470     Author = {Whitmer, Jonathan K. and Wang, Xiaoguang and Mondiot, Frederic and Miller, Daniel S. and Abbott, Nicholas L. and de Pablo, Juan J.},
471     Date-Added = {2014-02-06 20:01:25 +0000},
472     Date-Modified = {2014-02-06 20:01:25 +0000},
473     Doi = {10.1103/PhysRevLett.111.227801},
474     Issue = {22},
475     Journal = {Phys. Rev. Lett.},
476     Month = {Nov},
477     Numpages = {5},
478     Pages = {227801},
479     Publisher = {American Physical Society},
480     Title = {Nematic-Field-Driven Positioning of Particles in Liquid Crystal Droplets},
481     Url = {http://link.aps.org/doi/10.1103/PhysRevLett.111.227801},
482     Volume = {111},
483     Year = {2013},
484     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevLett.111.227801},
485     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevLett.111.227801}}
486    
487 jmarr 4024 @article{Oh:2008fk,
488     Abstract = {Nitrile- and thiocyanate-derivatized amino acids have been found to be useful IR probes for investigating their local electrostatic environments in proteins. To shed light on the CN stretch frequency shift and spectral lineshape change induced by interactions with hydrogen-bonding solvent molecules, we carried out both classical and quantum mechanical/molecular mechanical (QM/MM) molecular dynamics (MD) simulations for MeCN and MeSCN in water. These QM/MM and conventional force field MD simulation results were found to be inconsistent with the experimental results as well as with the high-level ab initio calculation results of MeCN-water and MeSCN-water potential energies. Thus, a new set of atomic partial charges of MeCN and MeSCN is obtained. By using the MD simulation trajectories and the electrostatic potential model recently developed, the CN and SCN stretching mode frequency trajectories were obtained and used to simulate the IR spectra. The C[Triple Bond]N frequency blueshifts of MeCN and MeSCN in water are estimated to be 9.0 and 1.9 cm(-1), respectively, in comparison with those of gas phase values. These values are found to be in reasonable agreement with the experimentally measured IR spectra of MeCN, MeSCN, beta-cyano-L-alanine, and cyanylated cysteine in water and other polar solvents.},
489     Author = {Oh, Kwang-Im and Choi, Jun-Ho and Lee, Joo-Hyun and Han, Jae-Beom and Lee, Hochan and Cho, Minhaeng},
490     Date-Added = {2014-02-06 18:11:52 +0000},
491     Date-Modified = {2014-02-06 18:11:52 +0000},
492     Doi = {10.1063/1.2904558},
493     Journal = {J Chem Phys},
494     Journal-Full = {The Journal of chemical physics},
495     Month = {Apr},
496     Number = {15},
497     Pages = {154504},
498     Pmid = {18433232},
499     Pst = {ppublish},
500     Title = {Nitrile and thiocyanate IR probes: molecular dynamics simulation studies},
501     Volume = {128},
502     Year = {2008},
503     Bdsk-File-1 = {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}}
504    
505 gezelter 4007 @article{Gray:1973ca,
506     Author = {Gray, G.W. and Harrison, K.J. and Nash, J.A.},
507     Date-Added = {2014-01-20 19:18:33 +0000},
508     Date-Modified = {2014-01-20 19:18:35 +0000},
509     Doi = {10.1049/el:19730096},
510     Issn = {0013-5194},
511     Journal = {Electronics Letters},
512     Keywords = {display systems;electro-optical effects;liquid crystals;displays;nematic liquid crystals;positive dielectric anisotropy},
513     Number = {6},
514     Pages = {130-131},
515     Title = {New family of nematic liquid crystals for displays},
516     Volume = {9},
517     Year = {1973},
518     Bdsk-Url-1 = {http://dx.doi.org/10.1049/el:19730096}}
519    
520     @article{Lee:2006qd,
521     Author = {Lee, Lay Min and Kwon, Hye J. and Kang, Joo H. and Nuzzo, Ralph G. and Schweizer, Kenneth S.},
522     Date-Added = {2014-01-20 19:14:33 +0000},
523     Date-Modified = {2014-01-20 19:39:28 +0000},
524     Doi = {http://dx.doi.org/10.1063/1.2210930},
525     Eid = 024705,
526     Journal = {The Journal of Chemical Physics},
527     Number = {2},
528     Pages = {024705},
529     Title = {Anchoring and electro-optical dynamics of thin liquid crystalline films in a polyimide cell: Experiment and theory},
530     Url = {http://scitation.aip.org/content/aip/journal/jcp/125/2/10.1063/1.2210930},
531     Volume = {125},
532     Year = {2006},
533     Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/125/2/10.1063/1.2210930},
534     Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.2210930}}
535    
536     @article{Zhang:2011hh,
537     Author = {Zhang, Jianguo and Su, Jiaye and Guo, Hongxia},
538     Date-Added = {2014-01-20 19:13:11 +0000},
539     Date-Modified = {2014-01-20 19:39:44 +0000},
540     Doi = {10.1021/jp111408n},
541     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp111408n},
542     Journal = {The Journal of Physical Chemistry B},
543     Number = {10},
544     Pages = {2214-2227},
545     Title = {An Atomistic Simulation for 4-Cyano-4$^\prime$-pentylbiphenyl and Its Homologue with a Reoptimized Force Field},
546     Url = {http://pubs.acs.org/doi/abs/10.1021/jp111408n},
547     Volume = {115},
548     Year = {2011},
549     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp111408n},
550     Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp111408n}}
551    
552     @article{Lim:2006xq,
553     Author = {Jong Kuk Lim and Ohyun Kwon and Dae Seung Kang and Sang-Woo Joo},
554     Date-Added = {2014-01-20 19:11:44 +0000},
555     Date-Modified = {2014-01-20 19:38:40 +0000},
556     Doi = {http://dx.doi.org/10.1016/j.cplett.2006.03.055},
557     Issn = {0009-2614},
558     Journal = {Chemical Physics Letters},
559     Number = {1--3},
560     Pages = {178 - 182},
561     Title = {Raman spectroscopy study and density functional theory calculations of the nematic liquid crystal 4-n-pentyl-4$^\prime$-cyanobiphenyl under an electric field},
562     Url = {http://www.sciencedirect.com/science/article/pii/S0009261406003873},
563     Volume = {423},
564     Year = {2006},
565     Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/S0009261406003873},
566     Bdsk-Url-2 = {http://dx.doi.org/10.1016/j.cplett.2006.03.055}}
567    
568     @article{Tucker:2004qq,
569     Author = {Tucker, Matthew J. and Getahun, Zelleka and Nanda, Vikas and DeGrado, William F. and Gai, Feng},
570     Date-Added = {2014-01-20 19:10:42 +0000},
571     Date-Modified = {2014-01-20 19:10:45 +0000},
572     Doi = {10.1021/ja032015d},
573     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/ja032015d},
574     Journal = {Journal of the American Chemical Society},
575     Number = {16},
576     Pages = {5078-5079},
577     Title = {A New Method for Determining the Local Environment and Orientation of Individual Side Chains of Membrane-Binding Peptides},
578     Url = {http://pubs.acs.org/doi/abs/10.1021/ja032015d},
579     Volume = {126},
580     Year = {2004},
581     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/ja032015d},
582     Bdsk-Url-2 = {http://dx.doi.org/10.1021/ja032015d}}
583    
584     @article{Webb:2008kn,
585     Author = {Webb, Lauren J. and Boxer, Steven G.},
586     Date-Added = {2014-01-20 19:09:37 +0000},
587     Date-Modified = {2014-01-20 19:38:19 +0000},
588     Doi = {10.1021/bi701708u},
589     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/bi701708u},
590     Journal = {Biochemistry},
591     Note = {PMID: 18205401},
592     Number = {6},
593     Pages = {1588-1598},
594     Title = {Electrostatic Fields Near the Active Site of Human Aldose Reductase: 1. New Inhibitors and Vibrational Stark Effect Measurements},
595     Url = {http://pubs.acs.org/doi/abs/10.1021/bi701708u},
596     Volume = {47},
597     Year = {2008},
598     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/bi701708u},
599     Bdsk-Url-2 = {http://dx.doi.org/10.1021/bi701708u}}
600    
601     @article{Boxer:2009xw,
602     Author = {Boxer, Steven G.},
603     Date-Added = {2014-01-20 19:07:47 +0000},
604     Date-Modified = {2014-01-20 19:37:48 +0000},
605     Doi = {10.1021/jp8067393},
606     Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp8067393},
607     Journal = {The Journal of Physical Chemistry B},
608     Number = {10},
609     Pages = {2972-2983},
610     Title = {Stark Realities},
611     Url = {http://pubs.acs.org/doi/abs/10.1021/jp8067393},
612     Volume = {113},
613     Year = {2009},
614     Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp8067393},
615     Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp8067393}}
616    
617     @article{Hatta:1991ee,
618     Author = {A. Hatta and H. Amano and W. Su{\"e}taka},
619     Date-Added = {2014-01-20 19:05:00 +0000},
620     Date-Modified = {2014-01-20 19:05:03 +0000},
621     Doi = {http://dx.doi.org/10.1016/0924-2031(91)80006-A},
622     Issn = {0924-2031},
623     Journal = {Vibrational Spectroscopy},
624     Keywords = {Liquid crystals},
625     Number = {4},
626     Pages = {371 - 376},
627     Title = {Electric field response of 5CB liquid crystal molecules in the electrode boundary region as probed by modulation infrared \{ATR\} spectroscopy},
628     Url = {http://www.sciencedirect.com/science/article/pii/092420319180006A},
629     Volume = {1},
630     Year = {1991},
631     Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/092420319180006A},
632     Bdsk-Url-2 = {http://dx.doi.org/10.1016/0924-2031(91)80006-A}}
633    
634     @incollection{Prost:1980wt,
635     Author = {Prost, J.},
636     Booktitle = {Liquid Crystals of One- and Two-Dimensional Order},
637     Date-Added = {2014-01-20 19:01:37 +0000},
638     Date-Modified = {2014-01-20 19:01:41 +0000},
639     Doi = {10.1007/978-3-642-67848-6_29},
640     Editor = {Helfrich, W. and Heppke, G.},
641     Isbn = {978-3-642-67850-9},
642     Language = {English},
643     Pages = {125-145},
644     Publisher = {Springer Berlin Heidelberg},
645     Series = {Springer Series in Chemical Physics},
646     Title = {Reflections on the Reentrant Nematic and the SA-SA Phase Transitions},
647     Url = {http://dx.doi.org/10.1007/978-3-642-67848-6_29},
648     Volume = {11},
649     Year = {1980},
650     Bdsk-Url-1 = {http://dx.doi.org/10.1007/978-3-642-67848-6_29}}
651    
652     @article{HARDOUIN:1983qf,
653     Author = {HARDOUIN, F and LEVELUT, AM and ACHARD, MF and SIGAUD, G},
654     Date-Added = {2014-01-20 18:56:21 +0000},
655     Date-Modified = {2014-01-20 18:56:21 +0000},
656     Issn = {{0021-7689}},
657     Journal = {{JOURNAL DE CHIMIE PHYSIQUE ET DE PHYSICO-CHIMIE BIOLOGIQUE}},
658     Number = {{1}},
659     Pages = {{53-64}},
660     Title = {{POLYMORPHISM IN POLAR MESOGENS .1. PHYSICO-CHEMISTRY AND STRUCTURAL ASPECTS}},
661     Unique-Id = {{ISI:A1983QJ60700008}},
662     Volume = {{80}},
663     Year = {{1983}}}
664    
665     @article{Leadbetter:1976vf,
666     Author = {Leadbetter, A. J. and Durrant, J. L. A. and Rugman, M.},
667     Date-Added = {2014-01-20 18:54:50 +0000},
668     Date-Modified = {2014-01-20 18:54:54 +0000},
669     Doi = {10.1080/15421407708083712},
670     Eprint = {http://www.tandfonline.com/doi/pdf/10.1080/15421407708083712},
671     Journal = {Molecular Crystals and Liquid Crystals},
672     Number = {10},
673     Pages = {231-235},
674     Title = {The Density Of 4 n-Octyl-4-Cyano-Biphenyl (8CB)},
675     Url = {http://www.tandfonline.com/doi/abs/10.1080/15421407708083712},
676     Volume = {34},
677     Year = {1976},
678     Bdsk-Url-1 = {http://www.tandfonline.com/doi/abs/10.1080/15421407708083712},
679     Bdsk-Url-2 = {http://dx.doi.org/10.1080/15421407708083712}}
680    
681     @book{Gray:1984hc,
682     Author = {Gray, G.W. and Goodby, J.W.G.},
683     Date-Added = {2014-01-20 18:39:08 +0000},
684     Date-Modified = {2014-01-20 18:39:08 +0000},
685     Isbn = {9780249441680},
686     Lccn = {lc84164554},
687     Publisher = {L. Hill},
688     Title = {Smectic liquid crystals: textures and structures},
689     Url = {http://books.google.com/books?id=WgTwAAAAMAAJ},
690     Year = {1984},
691     Bdsk-Url-1 = {http://books.google.com/books?id=WgTwAAAAMAAJ}}
692    
693     @article{Vanakaras:1998it,
694     Author = {Vanakaras, Alexandros G. and Photinos, Demetri J. and Samulski, Edward T.},
695     Date-Added = {2014-01-20 18:37:13 +0000},
696     Date-Modified = {2014-01-20 18:37:15 +0000},
697     Doi = {10.1103/PhysRevE.57.R4875},
698     Issue = {5},
699     Journal = {Phys. Rev. E},
700     Month = {May},
701     Numpages = {0},
702     Pages = {R4875--R4878},
703     Publisher = {American Physical Society},
704     Title = {Tilt, polarity, and spontaneous symmetry breaking in liquid crystals},
705     Url = {http://link.aps.org/doi/10.1103/PhysRevE.57.R4875},
706     Volume = {57},
707     Year = {1998},
708     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.57.R4875},
709     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.57.R4875}}
710    
711     @article{Prost:1984qe,
712     Author = {Prost, J.},
713     Date-Added = {2014-01-20 18:36:25 +0000},
714     Date-Modified = {2014-01-20 18:36:29 +0000},
715     Doi = {10.1080/00018738400101631},
716     Eprint = {http://www.tandfonline.com/doi/pdf/10.1080/00018738400101631},
717     Journal = {Advances in Physics},
718     Number = {1},
719     Pages = {1-46},
720     Title = {The smectic state},
721     Url = {http://www.tandfonline.com/doi/abs/10.1080/00018738400101631},
722     Volume = {33},
723     Year = {1984},
724     Bdsk-Url-1 = {http://www.tandfonline.com/doi/abs/10.1080/00018738400101631},
725     Bdsk-Url-2 = {http://dx.doi.org/10.1080/00018738400101631}}
726    
727     @article{Photinos:1976xe,
728     Author = {Photinos, Panagoitis J. and Saupe, Alfred},
729     Date-Added = {2014-01-20 18:34:10 +0000},
730     Date-Modified = {2014-01-20 18:34:14 +0000},
731     Doi = {10.1103/PhysRevA.13.1926},
732     Issue = {5},
733     Journal = {Phys. Rev. A},
734     Month = {May},
735     Numpages = {0},
736     Pages = {1926--1930},
737     Publisher = {American Physical Society},
738     Title = {Mean-field study of uniaxial smectic liquid crystals with polarized layers},
739     Url = {http://link.aps.org/doi/10.1103/PhysRevA.13.1926},
740     Volume = {13},
741     Year = {1976},
742     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.13.1926},
743     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.13.1926}}
744    
745     @article{Netz:1992cr,
746     Author = {Netz, Roland R. and Berker, A. Nihat},
747     Date-Added = {2014-01-20 18:33:40 +0000},
748     Date-Modified = {2014-01-20 18:33:43 +0000},
749     Doi = {10.1103/PhysRevLett.68.333},
750     Issue = {3},
751     Journal = {Phys. Rev. Lett.},
752     Month = {Jan},
753     Numpages = {0},
754     Pages = {333--336},
755     Publisher = {American Physical Society},
756     Title = {Smectic-<i>C</i> order, in-plane domains, and nematic reentrance in a microscopic model of liquid crystals},
757     Url = {http://link.aps.org/doi/10.1103/PhysRevLett.68.333},
758     Volume = {68},
759     Year = {1992},
760     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevLett.68.333},
761     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevLett.68.333}}
762    
763     @article{Meyer:1976qd,
764     Author = {Meyer, Robert B. and Lubensky, T. C.},
765     Date-Added = {2014-01-20 18:33:13 +0000},
766     Date-Modified = {2014-01-20 19:12:04 +0000},
767     Doi = {10.1103/PhysRevA.14.2307},
768     Issue = {6},
769     Journal = {Phys. Rev. A},
770     Month = {Dec},
771     Numpages = {0},
772     Pages = {2307--2320},
773     Publisher = {American Physical Society},
774     Title = {Mean-field theory of the nematic-smectic-A phase change in liquid crystals},
775     Url = {http://link.aps.org/doi/10.1103/PhysRevA.14.2307},
776     Volume = {14},
777     Year = {1976},
778     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.14.2307},
779     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.14.2307}}
780    
781     @article{Levesque:1993pd,
782     Author = {Levesque, D. and Weis, J. J. and Zarragoicoechea, G. J.},
783     Date-Added = {2014-01-20 18:32:43 +0000},
784     Date-Modified = {2014-01-20 18:32:45 +0000},
785     Doi = {10.1103/PhysRevE.47.496},
786     Issue = {1},
787     Journal = {Phys. Rev. E},
788     Month = {Jan},
789     Numpages = {0},
790     Pages = {496--505},
791     Publisher = {American Physical Society},
792     Title = {Monte Carlo simulation study of mesophase formation in dipolar spherocylinders},
793     Url = {http://link.aps.org/doi/10.1103/PhysRevE.47.496},
794     Volume = {47},
795     Year = {1993},
796     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.47.496},
797     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.47.496}}
798    
799     @article{Levelut:1981eu,
800     Author = {Levelut, A. M. and Tarento, R. J. and Hardouin, F. and Achard, M. F. and Sigaud, G.},
801     Date-Added = {2014-01-20 18:32:07 +0000},
802 gezelter 4042 Date-Modified = {2014-02-21 18:30:08 +0000},
803 gezelter 4007 Doi = {10.1103/PhysRevA.24.2180},
804     Issue = {4},
805     Journal = {Phys. Rev. A},
806     Month = {Oct},
807     Numpages = {0},
808     Pages = {2180--2186},
809     Publisher = {American Physical Society},
810 gezelter 4042 Title = {Number of $S_A$ phases},
811 gezelter 4007 Url = {http://link.aps.org/doi/10.1103/PhysRevA.24.2180},
812     Volume = {24},
813     Year = {1981},
814     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.24.2180},
815     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.24.2180}}
816    
817     @article{Jeu:1983ly,
818     Abstract = {The physical properties and the phase behaviour of some nematic liquid crystals are discussed, with emphasis on the influence of short-range antiparallel dipole correlation that occurs in mesogenic compounds with a strong terminal dipole moment. Evidence for this effect, which stems especially from dielectric studies, is summarized. Variations of the dipole correlation with molecular structure can explain the sometimes unexpected phase behaviour and physical properties of these substances. A qualitative model is given in terms of a monomer--dimer equilibrium.},
819     Author = {Jeu, W. H. De and Raynes, E. P. and Price, A. H. and Clark, M. G.},
820     Date-Added = {2014-01-20 18:30:36 +0000},
821     Date-Modified = {2014-01-20 18:30:39 +0000},
822     Doi = {10.1098/rsta.1983.0035},
823     Eprint = {http://rsta.royalsocietypublishing.org/content/309/1507/217.full.pdf+html},
824     Journal = {Philosophical Transactions of the Royal Society of London. Series A, Mathematical and Physical Sciences},
825     Number = {1507},
826     Pages = {217-229},
827     Title = {Liquid Crystalline Materials: Physical Properties and Intermolecular Interactions [and Discussion]},
828     Url = {http://rsta.royalsocietypublishing.org/content/309/1507/217.abstract},
829     Volume = {309},
830     Year = {1983},
831     Bdsk-Url-1 = {http://rsta.royalsocietypublishing.org/content/309/1507/217.abstract},
832     Bdsk-Url-2 = {http://dx.doi.org/10.1098/rsta.1983.0035}}
833    
834     @article{Indekeu:1986ty,
835     Author = {Indekeu, J. O. and Berker, A. Nihat},
836     Date-Added = {2014-01-20 18:27:51 +0000},
837     Date-Modified = {2014-01-20 18:50:31 +0000},
838     Doi = {10.1103/PhysRevA.33.1158},
839     Issue = {2},
840     Journal = {Phys. Rev. A},
841     Month = {Feb},
842     Numpages = {0},
843     Pages = {1158--1162},
844     Publisher = {American Physical Society},
845     Title = {Quadruple reentrance (nematic-smectic-Ad-nematic-smectic-Ad-nematic-smectic-A1) from the frustrated spin-gas model of liquid crystals},
846     Url = {http://link.aps.org/doi/10.1103/PhysRevA.33.1158},
847     Volume = {33},
848     Year = {1986},
849     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.33.1158},
850     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.33.1158}}
851    
852     @incollection{Hardouin:1980yq,
853     Author = {Hardouin, F. and Levelut, A.M. and Benattar, J.J. and Sigaud, G.},
854     Booktitle = {Liquid Crystals of One- and Two-Dimensional Order},
855     Date-Added = {2014-01-20 18:26:57 +0000},
856     Date-Modified = {2014-01-20 18:26:59 +0000},
857     Doi = {10.1007/978-3-642-67848-6_31},
858     Editor = {Helfrich, W. and Heppke, G.},
859     Isbn = {978-3-642-67850-9},
860     Language = {English},
861     Pages = {147-147},
862     Publisher = {Springer Berlin Heidelberg},
863     Series = {Springer Series in Chemical Physics},
864     Title = {X-Ray Investigations of the Smectic A1 --- Smectic A2 Transition},
865     Url = {http://dx.doi.org/10.1007/978-3-642-67848-6_31},
866     Volume = {11},
867     Year = {1980},
868     Bdsk-Url-1 = {http://dx.doi.org/10.1007/978-3-642-67848-6_31}}
869    
870     @article{Dowell:1985qf,
871     Author = {Dowell, F.},
872     Date-Added = {2014-01-20 18:25:24 +0000},
873     Date-Modified = {2014-01-20 18:25:26 +0000},
874     Doi = {10.1103/PhysRevA.31.3214},
875     Issue = {5},
876     Journal = {Phys. Rev. A},
877     Month = {May},
878     Numpages = {0},
879     Pages = {3214--3219},
880     Publisher = {American Physical Society},
881     Title = {Effect of longitudinal dipoles in liquid crystals},
882     Url = {http://link.aps.org/doi/10.1103/PhysRevA.31.3214},
883     Volume = {31},
884     Year = {1985},
885     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.31.3214},
886     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.31.3214}}
887    
888     @article{Baus:1989fk,
889     Author = {Baus, Marc and Colot, Jean-Louis},
890     Date-Added = {2014-01-20 18:24:36 +0000},
891     Date-Modified = {2014-01-20 18:24:39 +0000},
892     Doi = {10.1103/PhysRevA.40.5444},
893     Issue = {9},
894     Journal = {Phys. Rev. A},
895     Month = {Nov},
896     Numpages = {0},
897     Pages = {5444--5446},
898     Publisher = {American Physical Society},
899     Title = {Ferroelectric nematic liquid-crystal phases of dipolar hard ellipsoids},
900     Url = {http://link.aps.org/doi/10.1103/PhysRevA.40.5444},
901     Volume = {40},
902     Year = {1989},
903     Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.40.5444},
904     Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.40.5444}}