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1 %% This BibTeX bibliography file was created using BibDesk.
2 %% http://bibdesk.sourceforge.net/
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5 %% Created for James Marr at 2014-02-27 14:40:41 -0500
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8 %% Saved with string encoding Unicode (UTF-8)
9
10
11
12 @article{C3AN01651J,
13 Abstract = {In recent years{,} major developments in scanning electrochemical microscopy (SECM) have significantly broadened the application range of this electroanalytical technique from high-resolution electrochemical imaging via nanoscale probes to large scale mapping using arrays of microelectrodes. A major driving force in advancing the SECM methodology is based on developing more sophisticated probes beyond conventional micro-disc electrodes usually based on noble metals or carbon microwires. This critical review focuses on the design and development of advanced electrochemical probes particularly enabling combinations of SECM with other analytical measurement techniques to provide information beyond exclusively measuring electrochemical sample properties. Consequently{,} this critical review will focus on recent progress and new developments towards multifunctional imaging.},
14 Author = {Kranz, Christine},
15 Date-Added = {2014-02-27 19:40:33 +0000},
16 Date-Modified = {2014-02-27 19:40:33 +0000},
17 Doi = {10.1039/C3AN01651J},
18 Issue = {2},
19 Journal = {Analyst},
20 Pages = {336-352},
21 Publisher = {The Royal Society of Chemistry},
22 Title = {Recent advancements in nanoelectrodes and nanopipettes used in combined scanning electrochemical microscopy techniques},
23 Url = {http://dx.doi.org/10.1039/C3AN01651J},
24 Volume = {139},
25 Year = {2014},
26 Bdsk-Url-1 = {http://dx.doi.org/10.1039/C3AN01651J}}
27
28 @article{Kojima19881789,
29 Author = {Hiroyuki Kojima and Yasushi Takagi and Hiroki Teramoto},
30 Date-Added = {2014-02-27 19:25:16 +0000},
31 Date-Modified = {2014-02-27 19:25:16 +0000},
32 Doi = {http://dx.doi.org/10.1016/0013-4686(88)85016-3},
33 Issn = {0013-4686},
34 Journal = {Electrochimica Acta},
35 Number = {12},
36 Pages = {1789 - 1793},
37 Title = {Electrochemiluminescence in liquid crystals},
38 Url = {http://www.sciencedirect.com/science/article/pii/0013468688850163},
39 Volume = {33},
40 Year = {1988},
41 Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/0013468688850163},
42 Bdsk-Url-2 = {http://dx.doi.org/10.1016/0013-4686(88)85016-3}}
43
44 @article{Berne:1972pb,
45 Author = {Berne, Bruce J. and Pechukas, Philip},
46 Date-Added = {2014-02-21 18:28:49 +0000},
47 Date-Modified = {2014-02-21 18:28:49 +0000},
48 Doi = {http://dx.doi.org/10.1063/1.1677837},
49 Journal = {The Journal of Chemical Physics},
50 Number = {8},
51 Pages = {4213-4216},
52 Title = {Gaussian Model Potentials for Molecular Interactions},
53 Url = {http://scitation.aip.org/content/aip/journal/jcp/56/8/10.1063/1.1677837},
54 Volume = {56},
55 Year = {1972},
56 Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/56/8/10.1063/1.1677837},
57 Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.1677837}}
58
59 @article{Luckhurst:1990fy,
60 Author = {Luckhurst, G. R. and Stephens, R. A. and Phippen, R. W.},
61 Date-Added = {2014-02-21 18:27:10 +0000},
62 Date-Modified = {2014-02-21 18:27:10 +0000},
63 Doi = {10.1080/02678299008047361},
64 Eprint = {http://www.tandfonline.com/doi/pdf/10.1080/02678299008047361},
65 Journal = {Liquid Crystals},
66 Number = {4},
67 Pages = {451-464},
68 Title = {Computer simulation studies of anisotropic systems. XIX. Mesophases formed by the Gay-Berne model mesogen},
69 Url = {http://www.tandfonline.com/doi/abs/10.1080/02678299008047361},
70 Volume = {8},
71 Year = {1990},
72 Bdsk-Url-1 = {http://www.tandfonline.com/doi/abs/10.1080/02678299008047361},
73 Bdsk-Url-2 = {http://dx.doi.org/10.1080/02678299008047361}}
74
75 @article{Auer:2007dp,
76 Abstract = {We present improvements on our previous approaches for calculating vibrational spectroscopy observables for the OH stretch region of dilute HOD in liquid D2O. These revised approaches are implemented to calculate IR and isotropic Raman spectra, using the SPC/E simulation model, and the results are in good agreement with experiment. We also calculate observables associated with three-pulse IR echoes: the peak shift and 2D-IR spectrum. The agreement with experiment for the former is improved over our previous calculations, but discrepancies between theory and experiment still exist. Using our proposed definition for hydrogen bonding in liquid water, we decompose the distribution of frequencies in the OH stretch region in terms of subensembles of HOD molecules with different local hydrogen-bonding environments. Such a decomposition allows us to make the connection with experiments and calculations on water clusters and more generally to understand the extent of the relationship between transition frequency and local structure in the liquid.},
77 Author = {Auer, B. and Kumar, R. and Schmidt, J. R. and Skinner, J. L.},
78 Date-Added = {2014-02-21 18:20:31 +0000},
79 Date-Modified = {2014-02-21 18:31:54 +0000},
80 Doi = {10.1073/pnas.0701482104},
81 Eprint = {http://www.pnas.org/content/104/36/14215.full.pdf+html},
82 Journal = {Proceedings of the National Academy of Sciences},
83 Number = {36},
84 Pages = {14215-14220},
85 Title = {Hydrogen bonding and Raman, IR, and 2D-IR spectroscopy of dilute \ce{HOD} in liquid \ce{D2O}},
86 Url = {http://www.pnas.org/content/104/36/14215.abstract},
87 Volume = {104},
88 Year = {2007},
89 Bdsk-Url-1 = {http://www.pnas.org/content/104/36/14215.abstract},
90 Bdsk-Url-2 = {http://dx.doi.org/10.1073/pnas.0701482104}}
91
92 @article{Corcelli:2004ai,
93 Author = {Corcelli, S. A. and Lawrence, C. P. and Skinner, J. L.},
94 Date-Added = {2014-02-21 18:18:50 +0000},
95 Date-Modified = {2014-02-21 18:32:22 +0000},
96 Doi = {http://dx.doi.org/10.1063/1.1683072},
97 Journal = {The Journal of Chemical Physics},
98 Number = {17},
99 Pages = {8107-8117},
100 Title = {Combined electronic structure/molecular dynamics approach for ultrafast infrared spectroscopy of dilute \ce{HOD} in liquid \ce{H2O} and \ce{D2O}},
101 Url = {http://scitation.aip.org/content/aip/journal/jcp/120/17/10.1063/1.1683072},
102 Volume = {120},
103 Year = {2004},
104 Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/120/17/10.1063/1.1683072},
105 Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.1683072}}
106
107 @article{Morales:2009fp,
108 Author = {Morales, Christine M. and Thompson, Ward H.},
109 Date-Added = {2014-02-21 17:59:53 +0000},
110 Date-Modified = {2014-02-21 18:33:21 +0000},
111 Doi = {10.1021/jp8072969},
112 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp8072969},
113 Journal = {The Journal of Physical Chemistry A},
114 Note = {PMID: 19061371},
115 Number = {10},
116 Pages = {1922-1933},
117 Title = {Simulations of Infrared Spectra of Nanoconfined Liquids: Acetonitrile Confined in Nanoscale, Hydrophilic Silica Pores},
118 Url = {http://pubs.acs.org/doi/abs/10.1021/jp8072969},
119 Volume = {113},
120 Year = {2009},
121 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp8072969},
122 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp8072969}}
123
124 @article{Bose:2012eu,
125 Author = {Bose, Tushar Kanti and Saha, Jayashree},
126 Date-Added = {2014-02-21 14:00:07 +0000},
127 Date-Modified = {2014-02-21 14:00:07 +0000},
128 Doi = {10.1103/PhysRevE.86.050701},
129 Issue = {5},
130 Journal = {Phys. Rev. E},
131 Month = {Nov},
132 Numpages = {4},
133 Pages = {050701},
134 Publisher = {American Physical Society},
135 Title = {Origin of tilted-phase generation in systems of ellipsoidal molecules with dipolar interactions},
136 Url = {http://link.aps.org/doi/10.1103/PhysRevE.86.050701},
137 Volume = {86},
138 Year = {2012},
139 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.86.050701},
140 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.86.050701}}
141
142 @article{FILLER:1964yg,
143 Abstract = {An interpolation formula is derived which gives an apodized spectrum as the convolution of the unapodized spectrum (sampled at suitable points) with the apodized apparatus function. This allows many apodizations to be applied to a single interferogram with the performance of only a single Fourier transformation. A further saving in computation effort is possible if the apodized apparatus function decays rapidly away from its center. Examples of such cases are presented, where the interferogram is weighted by a function which is a cosine series of only a few terms.},
144 Author = {A. S. Filler},
145 Date-Added = {2014-02-20 18:13:39 +0000},
146 Date-Modified = {2014-02-21 18:31:22 +0000},
147 Doi = {10.1364/JOSA.54.000762},
148 Journal = {J. Opt. Soc. Am.},
149 Month = {Jun},
150 Number = {6},
151 Pages = {762--764},
152 Publisher = {OSA},
153 Title = {Apodization and Interpolation in Fourier-Transform Spectroscopy},
154 Url = {http://www.opticsinfobase.org/abstract.cfm?URI=josa-54-6-762},
155 Volume = {54},
156 Year = {1964},
157 Bdsk-Url-1 = {http://www.opticsinfobase.org/abstract.cfm?URI=josa-54-6-762},
158 Bdsk-Url-2 = {http://dx.doi.org/10.1364/JOSA.54.000762}}
159
160 @article{Naylor:2007rm,
161 Abstract = {Apodizing functions are used in Fourier transform spectroscopy (FTS) to reduce the magnitude of the sidelobes in the instrumental line shape (ILS), which are a direct result of the finite maximum optical path difference in the measured interferogram. Three apodizing functions, which are considered optimal in the sense of producing the smallest loss in spectral resolution for a given reduction in the magnitude of the largest sidelobe, find frequent use in FTS \[J. Opt. Soc. Am.66, 259 (1976)\]. We extend this series to include optimal apodizing functions corresponding to increases in the width of the ILS ranging from factors of 1.1 to 2.0 compared with its unapodized value, and we compare the results with other commonly used apodizing functions.},
162 Author = {David A. Naylor and Margaret K. Tahic},
163 Date-Added = {2014-02-20 16:45:24 +0000},
164 Date-Modified = {2014-02-20 16:45:24 +0000},
165 Doi = {10.1364/JOSAA.24.003644},
166 Journal = {J. Opt. Soc. Am. A},
167 Keywords = {Linewidth; Spectroscopy, Fourier transforms},
168 Month = {Nov},
169 Number = {11},
170 Pages = {3644--3648},
171 Publisher = {OSA},
172 Title = {Apodizing functions for Fourier transform spectroscopy},
173 Url = {http://josaa.osa.org/abstract.cfm?URI=josaa-24-11-3644},
174 Volume = {24},
175 Year = {2007},
176 Bdsk-Url-1 = {http://josaa.osa.org/abstract.cfm?URI=josaa-24-11-3644},
177 Bdsk-Url-2 = {http://dx.doi.org/10.1364/JOSAA.24.003644}}
178
179 @article{Morse:1929xy,
180 Author = {Morse, Philip M.},
181 Date-Added = {2014-02-19 21:18:41 +0000},
182 Date-Modified = {2014-02-19 21:18:43 +0000},
183 Doi = {10.1103/PhysRev.34.57},
184 Issue = {1},
185 Journal = {Phys. Rev.},
186 Month = {Jul},
187 Numpages = {0},
188 Pages = {57--64},
189 Publisher = {American Physical Society},
190 Title = {Diatomic Molecules According to the Wave Mechanics. II. Vibrational Levels},
191 Url = {http://link.aps.org/doi/10.1103/PhysRev.34.57},
192 Volume = {34},
193 Year = {1929},
194 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRev.34.57},
195 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRev.34.57}}
196
197 @article{Lee:1988qf,
198 Author = {Lee, Chengteh and Yang, Weitao and Parr, Robert G.},
199 Date-Added = {2014-02-19 21:03:16 +0000},
200 Date-Modified = {2014-02-19 21:03:19 +0000},
201 Doi = {10.1103/PhysRevB.37.785},
202 Issue = {2},
203 Journal = {Phys. Rev. B},
204 Month = {Jan},
205 Numpages = {0},
206 Pages = {785--789},
207 Publisher = {American Physical Society},
208 Title = {Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density},
209 Url = {http://link.aps.org/doi/10.1103/PhysRevB.37.785},
210 Volume = {37},
211 Year = {1988},
212 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevB.37.785},
213 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevB.37.785}}
214
215 @article{Becke:1993kq,
216 Author = {Becke, Axel D.},
217 Date-Added = {2014-02-19 21:02:30 +0000},
218 Date-Modified = {2014-02-21 18:30:55 +0000},
219 Doi = {http://dx.doi.org/10.1063/1.464913},
220 Journal = {The Journal of Chemical Physics},
221 Number = {7},
222 Pages = {5648-5652},
223 Title = {Density-functional thermochemistry. III. The role of exact exchange},
224 Url = {http://scitation.aip.org/content/aip/journal/jcp/98/7/10.1063/1.464913},
225 Volume = {98},
226 Year = {1993},
227 Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/98/7/10.1063/1.464913},
228 Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.464913}}
229
230 @book{Collings:1997rz,
231 Author = {Collings, P.J. and Hird, M.},
232 Date-Added = {2014-02-18 21:05:20 +0000},
233 Date-Modified = {2014-02-18 21:05:20 +0000},
234 Isbn = {9780203211199},
235 Publisher = {Taylor \& Francis},
236 Series = {Liquid Crystals Book Series},
237 Title = {Introduction to Liquid Crystals: Chemistry and Physics},
238 Url = {http://books.google.com/books?id=GBeDkKpZ5VQC},
239 Year = {1997},
240 Bdsk-Url-1 = {http://books.google.com/books?id=GBeDkKpZ5VQC}}
241
242 @article{Cleaver:1996rt,
243 Author = {Cleaver, Douglas J. and Care, Christopher M. and Allen, Michael P. and Neal, Maureen P.},
244 Date-Added = {2014-02-18 21:01:40 +0000},
245 Date-Modified = {2014-02-18 21:01:42 +0000},
246 Doi = {10.1103/PhysRevE.54.559},
247 Issue = {1},
248 Journal = {Phys. Rev. E},
249 Month = {Jul},
250 Numpages = {0},
251 Pages = {559--567},
252 Publisher = {American Physical Society},
253 Title = {Extension and generalization of the Gay-Berne potential},
254 Url = {http://link.aps.org/doi/10.1103/PhysRevE.54.559},
255 Volume = {54},
256 Year = {1996},
257 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.54.559},
258 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.54.559}}
259
260 @article{Kushick:1976xy,
261 Author = {Kushick, J. and Berne, Bruce J.},
262 Date-Added = {2014-02-18 21:00:21 +0000},
263 Date-Modified = {2014-02-18 21:00:21 +0000},
264 Doi = {http://dx.doi.org/10.1063/1.432403},
265 Journal = {The Journal of Chemical Physics},
266 Number = {4},
267 Pages = {1362-1367},
268 Title = {Computer simulation of anisotropic molecular fluids},
269 Url = {http://scitation.aip.org/content/aip/journal/jcp/64/4/10.1063/1.432403},
270 Volume = {64},
271 Year = {1976},
272 Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/64/4/10.1063/1.432403},
273 Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.432403}}
274
275 @article{Gay:1981yu,
276 Author = {Gay, J. G. and Berne, B. J.},
277 Date-Added = {2014-02-18 20:57:16 +0000},
278 Date-Modified = {2014-02-18 20:57:16 +0000},
279 Doi = {http://dx.doi.org/10.1063/1.441483},
280 Journal = {The Journal of Chemical Physics},
281 Number = {6},
282 Pages = {3316-3319},
283 Title = {Modification of the overlap potential to mimic a linear site--site potential},
284 Url = {http://scitation.aip.org/content/aip/journal/jcp/74/6/10.1063/1.441483},
285 Volume = {74},
286 Year = {1981},
287 Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/74/6/10.1063/1.441483},
288 Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.441483}}
289
290 @article{Choi:2008cr,
291 Author = {Choi, Jun-Ho and Oh, Kwang-Im and Lee, Hochan and Lee, Chewook and Cho, Minhaeng},
292 Date-Added = {2014-02-18 18:20:28 +0000},
293 Date-Modified = {2014-02-21 18:34:13 +0000},
294 Doi = {http://dx.doi.org/10.1063/1.2844787},
295 Eid = 134506,
296 Journal = {The Journal of Chemical Physics},
297 Number = {13},
298 Pages = {134506},
299 Title = {Nitrile and thiocyanate IR probes: Quantum chemistry calculation studies and multivariate least-square fitting analysis},
300 Url = {http://scitation.aip.org/content/aip/journal/jcp/128/13/10.1063/1.2844787},
301 Volume = {128},
302 Year = {2008},
303 Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/128/13/10.1063/1.2844787},
304 Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.2844787}}
305
306 @article{Fafarman:2010dq,
307 Author = {Fafarman, Aaron T. and Sigala, Paul A. and Herschlag, Daniel and Boxer, Steven G.},
308 Date-Added = {2014-02-18 18:13:20 +0000},
309 Date-Modified = {2014-02-18 18:13:20 +0000},
310 Doi = {10.1021/ja104573b},
311 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/ja104573b},
312 Journal = {Journal of the American Chemical Society},
313 Number = {37},
314 Pages = {12811-12813},
315 Title = {Decomposition of Vibrational Shifts of Nitriles into Electrostatic and Hydrogen-Bonding Effects},
316 Url = {http://pubs.acs.org/doi/abs/10.1021/ja104573b},
317 Volume = {132},
318 Year = {2010},
319 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/ja104573b},
320 Bdsk-Url-2 = {http://dx.doi.org/10.1021/ja104573b}}
321
322 @article{Lindquist:2008bh,
323 Author = {Lindquist, Beth A. and Haws, Ryan T. and Corcelli, Steven A.},
324 Date-Added = {2014-02-18 16:27:15 +0000},
325 Date-Modified = {2014-02-18 16:27:15 +0000},
326 Doi = {10.1021/jp804900u},
327 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp804900u},
328 Journal = {The Journal of Physical Chemistry B},
329 Note = {PMID: 18855431},
330 Number = {44},
331 Pages = {13991-14001},
332 Title = {Optimized Quantum Mechanics/Molecular Mechanics Strategies for Nitrile Vibrational Probes: Acetonitrile and para-Tolunitrile in Water and Tetrahydrofuran},
333 Url = {http://pubs.acs.org/doi/abs/10.1021/jp804900u},
334 Volume = {112},
335 Year = {2008},
336 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp804900u},
337 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp804900u}}
338
339 @article{Lindquist:2008qf,
340 Author = {Lindquist, Beth A. and Corcelli, Steven A.},
341 Date-Added = {2014-02-18 16:26:29 +0000},
342 Date-Modified = {2014-02-21 18:05:15 +0000},
343 Doi = {10.1021/jp802039e},
344 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp802039e},
345 Journal = {The Journal of Physical Chemistry B},
346 Note = {PMID: 18438998},
347 Number = {20},
348 Pages = {6301-6303},
349 Title = {Nitrile Groups as Vibrational Probes: Calculations of the CN Infrared Absorption Line Shape of Acetonitrile in Water and Tetrahydrofuran},
350 Url = {http://pubs.acs.org/doi/abs/10.1021/jp802039e},
351 Volume = {112},
352 Year = {2008},
353 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp802039e},
354 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp802039e}}
355
356 @article{Waegele:2010ve,
357 Author = {Waegele, Matthias M. and Gai, Feng},
358 Date-Added = {2014-02-18 16:24:37 +0000},
359 Date-Modified = {2014-02-18 16:24:37 +0000},
360 Doi = {10.1021/jz900429z},
361 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jz900429z},
362 Journal = {The Journal of Physical Chemistry Letters},
363 Number = {4},
364 Pages = {781-786},
365 Title = {Computational Modeling of the Nitrile Stretching Vibration of 5-Cyanoindole in Water},
366 Url = {http://pubs.acs.org/doi/abs/10.1021/jz900429z},
367 Volume = {1},
368 Year = {2010},
369 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jz900429z},
370 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jz900429z}}
371
372 @article{Leyte:1997zl,
373 Abstract = {Time-resolved (TR) spectra of 5CB in the millisecond domain were obtained during excitation with electric fields of different time dependence: ac, dc, and ac $+$ dc. The response to ac excitation occurs mainly at twice the modulating frequency. The effect of the addition of dc to an ac field is the induction of an additional response at the ac frequency. The additional 'single frequency' response persists indefinitely, even though the response to the application of only a permanent dc field relaxes within roughly 200 ms. The amplitude of the oscillating responses diminishes with increasing ac frequency. This result is in accordance with the expected response to the torque exerted by the ac field. Different functional group absorptions respond without a significant phase difference in this time scale.},
374 Author = {J. C. Leyte and P. C. M. Van Woerkom},
375 Date-Added = {2014-02-18 16:19:03 +0000},
376 Date-Modified = {2014-02-21 18:35:10 +0000},
377 Journal = {Appl. Spectrosc.},
378 Month = {Nov},
379 Number = {11},
380 Pages = {1711--1714},
381 Publisher = {OSA},
382 Title = {FT-IR TRS of Liquid Crystalline 5CB in AC, DC, and AC $+$ DC Electric Fields},
383 Url = {http://as.osa.org/abstract.cfm?URI=as-51-11-1711},
384 Volume = {51},
385 Year = {1997},
386 Bdsk-Url-1 = {http://as.osa.org/abstract.cfm?URI=as-51-11-1711}}
387
388 @article{Moreno-Razo:2012rz,
389 Annote = {10.1038/nature11084},
390 Author = {Moreno-Razo, J. A. and Sambriski, E. J. and Abbott, N. L. and Hernandez-Ortiz, J. P. and de Pablo, J. J.},
391 Date = {2012/05/03/print},
392 Date-Added = {2014-02-18 16:07:15 +0000},
393 Date-Modified = {2014-02-18 16:07:15 +0000},
394 Day = {03},
395 Isbn = {0028-0836},
396 Journal = {Nature},
397 L3 = {http://www.nature.com/nature/journal/v485/n7396/abs/nature11084.html#supplementary-information},
398 M3 = {10.1038/nature11084},
399 Month = {05},
400 Number = {7396},
401 Pages = {86--89},
402 Publisher = {Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.},
403 Title = {Liquid-crystal-mediated self-assembly at nanodroplet interfaces},
404 Ty = {JOUR},
405 Url = {http://dx.doi.org/10.1038/nature11084},
406 Volume = {485},
407 Year = {2012},
408 Bdsk-Url-1 = {http://dx.doi.org/10.1038/nature11084}}
409
410 @article{Schkolnik:2012ty,
411 Author = {Schkolnik, Gal and Salewski, Johannes and Millo, Diego and Zebger, Ingo and Franzen, Stefan and Hildebrandt, Peter},
412 Date-Added = {2014-02-18 15:43:30 +0000},
413 Date-Modified = {2014-02-18 15:43:30 +0000},
414 Doi = {10.3390/ijms13067466},
415 Issn = {1422-0067},
416 Journal = {International Journal of Molecular Sciences},
417 Number = {6},
418 Pages = {7466--7482},
419 Pubmedid = {22837705},
420 Title = {Vibrational Stark Effect of the Electric-Field Reporter 4-Mercaptobenzonitrile as a Tool for Investigating Electrostatics at Electrode/SAM/Solution Interfaces},
421 Url = {http://www.mdpi.com/1422-0067/13/6/7466},
422 Volume = {13},
423 Year = {2012},
424 Bdsk-Url-1 = {http://www.mdpi.com/1422-0067/13/6/7466},
425 Bdsk-Url-2 = {http://dx.doi.org/10.3390/ijms13067466}}
426
427 @article{Andrews:2000qv,
428 Author = {Andrews, Steven S. and Boxer, Steven G.},
429 Date-Added = {2014-02-18 15:39:01 +0000},
430 Date-Modified = {2014-02-18 15:39:01 +0000},
431 Doi = {10.1021/jp002242r},
432 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp002242r},
433 Journal = {The Journal of Physical Chemistry A},
434 Number = {51},
435 Pages = {11853-11863},
436 Title = {Vibrational Stark Effects of Nitriles I. Methods and Experimental Results},
437 Url = {http://pubs.acs.org/doi/abs/10.1021/jp002242r},
438 Volume = {104},
439 Year = {2000},
440 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp002242r},
441 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp002242r}}
442
443 @article{Oklejas:2002uq,
444 Author = {Oklejas, Vanessa and Sjostrom, Chris and Harris, Joel M.},
445 Date-Added = {2014-02-18 15:24:01 +0000},
446 Date-Modified = {2014-02-18 15:24:01 +0000},
447 Doi = {10.1021/ja017656s},
448 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/ja017656s},
449 Journal = {Journal of the American Chemical Society},
450 Number = {11},
451 Pages = {2408-2409},
452 Title = {SERS Detection of the Vibrational Stark Effect from Nitrile-Terminated SAMs to Probe Electric Fields in the Diffuse Double-Layer},
453 Url = {http://pubs.acs.org/doi/abs/10.1021/ja017656s},
454 Volume = {124},
455 Year = {2002},
456 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/ja017656s},
457 Bdsk-Url-2 = {http://dx.doi.org/10.1021/ja017656s}}
458
459 @article{Lindquist:2009fk,
460 Abstract = {This paper presents an overview of recent experiments and theoretical developments aimed at using vibrational spectroscopy to understand the structure and dynamics of nitrile-labeled biomolecules. Nitrile groups are excellent vibrational probes of proteins and DNA because they absorb in a region of the spectrum that is relatively free of absorption due to the biomolecule{,} and they have high extinction coefficients. The vibrational frequency of nitrile groups is also extraordinarily sensitive to its local environment{,} and thus C[triple bond{,} length as m-dash]N bonds have been employed in both linear and 2-D infrared (IR) spectroscopy experiments and also as vibrational Stark probes of electric fields in proteins. The interpretation and design of these experiments would be enhanced by accurate calculations of IR spectra from molecular dynamics simulations. Recently{,} theoretical developments towards computing the vibrational spectrum of nitrile groups in the condensed-phase have been highly successful. A strong synergy between experiment and theory will further promote the use of vibrational spectroscopy of nitrile-labeled biomolecules to address fundamental questions of structure and dynamics that are elusive to other techniques.},
461 Author = {Lindquist, Beth A. and Furse, Kristina E. and Corcelli, Steven A.},
462 Date-Added = {2014-02-18 15:16:38 +0000},
463 Date-Modified = {2014-02-18 15:16:38 +0000},
464 Doi = {10.1039/B908588B},
465 Issue = {37},
466 Journal = {Phys. Chem. Chem. Phys.},
467 Pages = {8119-8132},
468 Publisher = {The Royal Society of Chemistry},
469 Title = {Nitrile groups as vibrational probes of biomolecular structure and dynamics: an overview},
470 Url = {http://dx.doi.org/10.1039/B908588B},
471 Volume = {11},
472 Year = {2009},
473 Bdsk-Url-1 = {http://dx.doi.org/10.1039/B908588B}}
474
475 @article{Meineke05,
476 Author = {M.~A. Meineke and C.~F. {Vardeman II} and T. Lin and C.~J. Fennell and J.~D. Gezelter},
477 Date-Added = {2014-02-14 19:21:43 +0000},
478 Date-Modified = {2014-02-14 19:21:43 +0000},
479 Journal = {J. Comp. Chem.},
480 Pages = {252-271},
481 Title = {$\mbox{OOPSE: A}$n Open Source Object-Oriented Parallel Simulation Engine for Molecular Dynamics},
482 Volume = 26,
483 Year = 2005}
484
485 @article{Fennell:2006zl,
486 Abstract = {We investigate pairwise electrostatic interaction methods and show that there are viable computationally efficient (O(N)) alternatives to the Ewald summation for typical modern molecular simulations. These methods are extended from the damped and cutoff-neutralized Coulombic sum originally proposed by Wolf [J. Chem. Phys. 110, 8255 (1999)]. One of these, the damped shifted force method, shows a remarkable ability to reproduce the energetic and dynamic characteristics exhibited by simulations employing lattice summation techniques. Comparisons were performed with this and other pairwise methods against the smooth particle-mesh Ewald summation to see how well they reproduce the energetics and dynamics of a variety of molecular simulations. (c) 2006 American Institute of Physics.},
487 Address = {CIRCULATION \& FULFILLMENT DIV, 2 HUNTINGTON QUADRANGLE, STE 1 N O 1, MELVILLE, NY 11747-4501 USA},
488 Author = {Fennell, Christopher~J. and Gezelter, J.~Daniel},
489 Date = {JUN 21 2006},
490 Date-Added = {2014-02-14 19:21:36 +0000},
491 Date-Modified = {2014-02-14 19:21:36 +0000},
492 Doi = {ARTN 234104},
493 Journal = jcp,
494 Publisher = {AMER INST PHYSICS},
495 Timescited = {15},
496 Title = {Is the {E}wald summation still necessary? Pairwise alternatives to the accepted standard for long-range electrostatics},
497 Volume = {124},
498 Year = {2006},
499 Bdsk-Url-1 = {http://dx.doi.org/234104}}
500
501 @article{PhysRevLett.111.227801,
502 Author = {Whitmer, Jonathan K. and Wang, Xiaoguang and Mondiot, Frederic and Miller, Daniel S. and Abbott, Nicholas L. and de Pablo, Juan J.},
503 Date-Added = {2014-02-06 20:01:25 +0000},
504 Date-Modified = {2014-02-06 20:01:25 +0000},
505 Doi = {10.1103/PhysRevLett.111.227801},
506 Issue = {22},
507 Journal = {Phys. Rev. Lett.},
508 Month = {Nov},
509 Numpages = {5},
510 Pages = {227801},
511 Publisher = {American Physical Society},
512 Title = {Nematic-Field-Driven Positioning of Particles in Liquid Crystal Droplets},
513 Url = {http://link.aps.org/doi/10.1103/PhysRevLett.111.227801},
514 Volume = {111},
515 Year = {2013},
516 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevLett.111.227801},
517 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevLett.111.227801}}
518
519 @article{Oh:2008fk,
520 Abstract = {Nitrile- and thiocyanate-derivatized amino acids have been found to be useful IR probes for investigating their local electrostatic environments in proteins. To shed light on the CN stretch frequency shift and spectral lineshape change induced by interactions with hydrogen-bonding solvent molecules, we carried out both classical and quantum mechanical/molecular mechanical (QM/MM) molecular dynamics (MD) simulations for MeCN and MeSCN in water. These QM/MM and conventional force field MD simulation results were found to be inconsistent with the experimental results as well as with the high-level ab initio calculation results of MeCN-water and MeSCN-water potential energies. Thus, a new set of atomic partial charges of MeCN and MeSCN is obtained. By using the MD simulation trajectories and the electrostatic potential model recently developed, the CN and SCN stretching mode frequency trajectories were obtained and used to simulate the IR spectra. The C[Triple Bond]N frequency blueshifts of MeCN and MeSCN in water are estimated to be 9.0 and 1.9 cm(-1), respectively, in comparison with those of gas phase values. These values are found to be in reasonable agreement with the experimentally measured IR spectra of MeCN, MeSCN, beta-cyano-L-alanine, and cyanylated cysteine in water and other polar solvents.},
521 Author = {Oh, Kwang-Im and Choi, Jun-Ho and Lee, Joo-Hyun and Han, Jae-Beom and Lee, Hochan and Cho, Minhaeng},
522 Date-Added = {2014-02-06 18:11:52 +0000},
523 Date-Modified = {2014-02-06 18:11:52 +0000},
524 Doi = {10.1063/1.2904558},
525 Journal = {J Chem Phys},
526 Journal-Full = {The Journal of chemical physics},
527 Month = {Apr},
528 Number = {15},
529 Pages = {154504},
530 Pmid = {18433232},
531 Pst = {ppublish},
532 Title = {Nitrile and thiocyanate IR probes: molecular dynamics simulation studies},
533 Volume = {128},
534 Year = {2008},
535 Bdsk-File-1 = {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}}
536
537 @article{Gray:1973ca,
538 Author = {Gray, G.W. and Harrison, K.J. and Nash, J.A.},
539 Date-Added = {2014-01-20 19:18:33 +0000},
540 Date-Modified = {2014-01-20 19:18:35 +0000},
541 Doi = {10.1049/el:19730096},
542 Issn = {0013-5194},
543 Journal = {Electronics Letters},
544 Keywords = {display systems;electro-optical effects;liquid crystals;displays;nematic liquid crystals;positive dielectric anisotropy},
545 Number = {6},
546 Pages = {130-131},
547 Title = {New family of nematic liquid crystals for displays},
548 Volume = {9},
549 Year = {1973},
550 Bdsk-Url-1 = {http://dx.doi.org/10.1049/el:19730096}}
551
552 @article{Lee:2006qd,
553 Author = {Lee, Lay Min and Kwon, Hye J. and Kang, Joo H. and Nuzzo, Ralph G. and Schweizer, Kenneth S.},
554 Date-Added = {2014-01-20 19:14:33 +0000},
555 Date-Modified = {2014-01-20 19:39:28 +0000},
556 Doi = {http://dx.doi.org/10.1063/1.2210930},
557 Eid = 024705,
558 Journal = {The Journal of Chemical Physics},
559 Number = {2},
560 Pages = {024705},
561 Title = {Anchoring and electro-optical dynamics of thin liquid crystalline films in a polyimide cell: Experiment and theory},
562 Url = {http://scitation.aip.org/content/aip/journal/jcp/125/2/10.1063/1.2210930},
563 Volume = {125},
564 Year = {2006},
565 Bdsk-Url-1 = {http://scitation.aip.org/content/aip/journal/jcp/125/2/10.1063/1.2210930},
566 Bdsk-Url-2 = {http://dx.doi.org/10.1063/1.2210930}}
567
568 @article{Zhang:2011hh,
569 Author = {Zhang, Jianguo and Su, Jiaye and Guo, Hongxia},
570 Date-Added = {2014-01-20 19:13:11 +0000},
571 Date-Modified = {2014-01-20 19:39:44 +0000},
572 Doi = {10.1021/jp111408n},
573 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp111408n},
574 Journal = {The Journal of Physical Chemistry B},
575 Number = {10},
576 Pages = {2214-2227},
577 Title = {An Atomistic Simulation for 4-Cyano-4$^\prime$-pentylbiphenyl and Its Homologue with a Reoptimized Force Field},
578 Url = {http://pubs.acs.org/doi/abs/10.1021/jp111408n},
579 Volume = {115},
580 Year = {2011},
581 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp111408n},
582 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp111408n}}
583
584 @article{Lim:2006xq,
585 Author = {Jong Kuk Lim and Ohyun Kwon and Dae Seung Kang and Sang-Woo Joo},
586 Date-Added = {2014-01-20 19:11:44 +0000},
587 Date-Modified = {2014-01-20 19:38:40 +0000},
588 Doi = {http://dx.doi.org/10.1016/j.cplett.2006.03.055},
589 Issn = {0009-2614},
590 Journal = {Chemical Physics Letters},
591 Number = {1--3},
592 Pages = {178 - 182},
593 Title = {Raman spectroscopy study and density functional theory calculations of the nematic liquid crystal 4-n-pentyl-4$^\prime$-cyanobiphenyl under an electric field},
594 Url = {http://www.sciencedirect.com/science/article/pii/S0009261406003873},
595 Volume = {423},
596 Year = {2006},
597 Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/S0009261406003873},
598 Bdsk-Url-2 = {http://dx.doi.org/10.1016/j.cplett.2006.03.055}}
599
600 @article{Tucker:2004qq,
601 Author = {Tucker, Matthew J. and Getahun, Zelleka and Nanda, Vikas and DeGrado, William F. and Gai, Feng},
602 Date-Added = {2014-01-20 19:10:42 +0000},
603 Date-Modified = {2014-01-20 19:10:45 +0000},
604 Doi = {10.1021/ja032015d},
605 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/ja032015d},
606 Journal = {Journal of the American Chemical Society},
607 Number = {16},
608 Pages = {5078-5079},
609 Title = {A New Method for Determining the Local Environment and Orientation of Individual Side Chains of Membrane-Binding Peptides},
610 Url = {http://pubs.acs.org/doi/abs/10.1021/ja032015d},
611 Volume = {126},
612 Year = {2004},
613 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/ja032015d},
614 Bdsk-Url-2 = {http://dx.doi.org/10.1021/ja032015d}}
615
616 @article{Webb:2008kn,
617 Author = {Webb, Lauren J. and Boxer, Steven G.},
618 Date-Added = {2014-01-20 19:09:37 +0000},
619 Date-Modified = {2014-01-20 19:38:19 +0000},
620 Doi = {10.1021/bi701708u},
621 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/bi701708u},
622 Journal = {Biochemistry},
623 Note = {PMID: 18205401},
624 Number = {6},
625 Pages = {1588-1598},
626 Title = {Electrostatic Fields Near the Active Site of Human Aldose Reductase: 1. New Inhibitors and Vibrational Stark Effect Measurements},
627 Url = {http://pubs.acs.org/doi/abs/10.1021/bi701708u},
628 Volume = {47},
629 Year = {2008},
630 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/bi701708u},
631 Bdsk-Url-2 = {http://dx.doi.org/10.1021/bi701708u}}
632
633 @article{Boxer:2009xw,
634 Author = {Boxer, Steven G.},
635 Date-Added = {2014-01-20 19:07:47 +0000},
636 Date-Modified = {2014-01-20 19:37:48 +0000},
637 Doi = {10.1021/jp8067393},
638 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp8067393},
639 Journal = {The Journal of Physical Chemistry B},
640 Number = {10},
641 Pages = {2972-2983},
642 Title = {Stark Realities},
643 Url = {http://pubs.acs.org/doi/abs/10.1021/jp8067393},
644 Volume = {113},
645 Year = {2009},
646 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp8067393},
647 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp8067393}}
648
649 @article{Hatta:1991ee,
650 Author = {A. Hatta and H. Amano and W. Su{\"e}taka},
651 Date-Added = {2014-01-20 19:05:00 +0000},
652 Date-Modified = {2014-01-20 19:05:03 +0000},
653 Doi = {http://dx.doi.org/10.1016/0924-2031(91)80006-A},
654 Issn = {0924-2031},
655 Journal = {Vibrational Spectroscopy},
656 Keywords = {Liquid crystals},
657 Number = {4},
658 Pages = {371 - 376},
659 Title = {Electric field response of 5CB liquid crystal molecules in the electrode boundary region as probed by modulation infrared \{ATR\} spectroscopy},
660 Url = {http://www.sciencedirect.com/science/article/pii/092420319180006A},
661 Volume = {1},
662 Year = {1991},
663 Bdsk-Url-1 = {http://www.sciencedirect.com/science/article/pii/092420319180006A},
664 Bdsk-Url-2 = {http://dx.doi.org/10.1016/0924-2031(91)80006-A}}
665
666 @incollection{Prost:1980wt,
667 Author = {Prost, J.},
668 Booktitle = {Liquid Crystals of One- and Two-Dimensional Order},
669 Date-Added = {2014-01-20 19:01:37 +0000},
670 Date-Modified = {2014-01-20 19:01:41 +0000},
671 Doi = {10.1007/978-3-642-67848-6_29},
672 Editor = {Helfrich, W. and Heppke, G.},
673 Isbn = {978-3-642-67850-9},
674 Language = {English},
675 Pages = {125-145},
676 Publisher = {Springer Berlin Heidelberg},
677 Series = {Springer Series in Chemical Physics},
678 Title = {Reflections on the Reentrant Nematic and the SA-SA Phase Transitions},
679 Url = {http://dx.doi.org/10.1007/978-3-642-67848-6_29},
680 Volume = {11},
681 Year = {1980},
682 Bdsk-Url-1 = {http://dx.doi.org/10.1007/978-3-642-67848-6_29}}
683
684 @article{HARDOUIN:1983qf,
685 Author = {HARDOUIN, F and LEVELUT, AM and ACHARD, MF and SIGAUD, G},
686 Date-Added = {2014-01-20 18:56:21 +0000},
687 Date-Modified = {2014-01-20 18:56:21 +0000},
688 Issn = {{0021-7689}},
689 Journal = {{JOURNAL DE CHIMIE PHYSIQUE ET DE PHYSICO-CHIMIE BIOLOGIQUE}},
690 Number = {{1}},
691 Pages = {{53-64}},
692 Title = {{POLYMORPHISM IN POLAR MESOGENS .1. PHYSICO-CHEMISTRY AND STRUCTURAL ASPECTS}},
693 Unique-Id = {{ISI:A1983QJ60700008}},
694 Volume = {{80}},
695 Year = {{1983}}}
696
697 @article{Leadbetter:1976vf,
698 Author = {Leadbetter, A. J. and Durrant, J. L. A. and Rugman, M.},
699 Date-Added = {2014-01-20 18:54:50 +0000},
700 Date-Modified = {2014-01-20 18:54:54 +0000},
701 Doi = {10.1080/15421407708083712},
702 Eprint = {http://www.tandfonline.com/doi/pdf/10.1080/15421407708083712},
703 Journal = {Molecular Crystals and Liquid Crystals},
704 Number = {10},
705 Pages = {231-235},
706 Title = {The Density Of 4 n-Octyl-4-Cyano-Biphenyl (8CB)},
707 Url = {http://www.tandfonline.com/doi/abs/10.1080/15421407708083712},
708 Volume = {34},
709 Year = {1976},
710 Bdsk-Url-1 = {http://www.tandfonline.com/doi/abs/10.1080/15421407708083712},
711 Bdsk-Url-2 = {http://dx.doi.org/10.1080/15421407708083712}}
712
713 @book{Gray:1984hc,
714 Author = {Gray, G.W. and Goodby, J.W.G.},
715 Date-Added = {2014-01-20 18:39:08 +0000},
716 Date-Modified = {2014-01-20 18:39:08 +0000},
717 Isbn = {9780249441680},
718 Lccn = {lc84164554},
719 Publisher = {L. Hill},
720 Title = {Smectic liquid crystals: textures and structures},
721 Url = {http://books.google.com/books?id=WgTwAAAAMAAJ},
722 Year = {1984},
723 Bdsk-Url-1 = {http://books.google.com/books?id=WgTwAAAAMAAJ}}
724
725 @article{Vanakaras:1998it,
726 Author = {Vanakaras, Alexandros G. and Photinos, Demetri J. and Samulski, Edward T.},
727 Date-Added = {2014-01-20 18:37:13 +0000},
728 Date-Modified = {2014-01-20 18:37:15 +0000},
729 Doi = {10.1103/PhysRevE.57.R4875},
730 Issue = {5},
731 Journal = {Phys. Rev. E},
732 Month = {May},
733 Numpages = {0},
734 Pages = {R4875--R4878},
735 Publisher = {American Physical Society},
736 Title = {Tilt, polarity, and spontaneous symmetry breaking in liquid crystals},
737 Url = {http://link.aps.org/doi/10.1103/PhysRevE.57.R4875},
738 Volume = {57},
739 Year = {1998},
740 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.57.R4875},
741 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.57.R4875}}
742
743 @article{Prost:1984qe,
744 Author = {Prost, J.},
745 Date-Added = {2014-01-20 18:36:25 +0000},
746 Date-Modified = {2014-01-20 18:36:29 +0000},
747 Doi = {10.1080/00018738400101631},
748 Eprint = {http://www.tandfonline.com/doi/pdf/10.1080/00018738400101631},
749 Journal = {Advances in Physics},
750 Number = {1},
751 Pages = {1-46},
752 Title = {The smectic state},
753 Url = {http://www.tandfonline.com/doi/abs/10.1080/00018738400101631},
754 Volume = {33},
755 Year = {1984},
756 Bdsk-Url-1 = {http://www.tandfonline.com/doi/abs/10.1080/00018738400101631},
757 Bdsk-Url-2 = {http://dx.doi.org/10.1080/00018738400101631}}
758
759 @article{Photinos:1976xe,
760 Author = {Photinos, Panagoitis J. and Saupe, Alfred},
761 Date-Added = {2014-01-20 18:34:10 +0000},
762 Date-Modified = {2014-01-20 18:34:14 +0000},
763 Doi = {10.1103/PhysRevA.13.1926},
764 Issue = {5},
765 Journal = {Phys. Rev. A},
766 Month = {May},
767 Numpages = {0},
768 Pages = {1926--1930},
769 Publisher = {American Physical Society},
770 Title = {Mean-field study of uniaxial smectic liquid crystals with polarized layers},
771 Url = {http://link.aps.org/doi/10.1103/PhysRevA.13.1926},
772 Volume = {13},
773 Year = {1976},
774 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.13.1926},
775 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.13.1926}}
776
777 @article{Netz:1992cr,
778 Author = {Netz, Roland R. and Berker, A. Nihat},
779 Date-Added = {2014-01-20 18:33:40 +0000},
780 Date-Modified = {2014-01-20 18:33:43 +0000},
781 Doi = {10.1103/PhysRevLett.68.333},
782 Issue = {3},
783 Journal = {Phys. Rev. Lett.},
784 Month = {Jan},
785 Numpages = {0},
786 Pages = {333--336},
787 Publisher = {American Physical Society},
788 Title = {Smectic-<i>C</i> order, in-plane domains, and nematic reentrance in a microscopic model of liquid crystals},
789 Url = {http://link.aps.org/doi/10.1103/PhysRevLett.68.333},
790 Volume = {68},
791 Year = {1992},
792 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevLett.68.333},
793 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevLett.68.333}}
794
795 @article{Meyer:1976qd,
796 Author = {Meyer, Robert B. and Lubensky, T. C.},
797 Date-Added = {2014-01-20 18:33:13 +0000},
798 Date-Modified = {2014-01-20 19:12:04 +0000},
799 Doi = {10.1103/PhysRevA.14.2307},
800 Issue = {6},
801 Journal = {Phys. Rev. A},
802 Month = {Dec},
803 Numpages = {0},
804 Pages = {2307--2320},
805 Publisher = {American Physical Society},
806 Title = {Mean-field theory of the nematic-smectic-A phase change in liquid crystals},
807 Url = {http://link.aps.org/doi/10.1103/PhysRevA.14.2307},
808 Volume = {14},
809 Year = {1976},
810 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.14.2307},
811 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.14.2307}}
812
813 @article{Levesque:1993pd,
814 Author = {Levesque, D. and Weis, J. J. and Zarragoicoechea, G. J.},
815 Date-Added = {2014-01-20 18:32:43 +0000},
816 Date-Modified = {2014-01-20 18:32:45 +0000},
817 Doi = {10.1103/PhysRevE.47.496},
818 Issue = {1},
819 Journal = {Phys. Rev. E},
820 Month = {Jan},
821 Numpages = {0},
822 Pages = {496--505},
823 Publisher = {American Physical Society},
824 Title = {Monte Carlo simulation study of mesophase formation in dipolar spherocylinders},
825 Url = {http://link.aps.org/doi/10.1103/PhysRevE.47.496},
826 Volume = {47},
827 Year = {1993},
828 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevE.47.496},
829 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevE.47.496}}
830
831 @article{Levelut:1981eu,
832 Author = {Levelut, A. M. and Tarento, R. J. and Hardouin, F. and Achard, M. F. and Sigaud, G.},
833 Date-Added = {2014-01-20 18:32:07 +0000},
834 Date-Modified = {2014-02-21 18:30:08 +0000},
835 Doi = {10.1103/PhysRevA.24.2180},
836 Issue = {4},
837 Journal = {Phys. Rev. A},
838 Month = {Oct},
839 Numpages = {0},
840 Pages = {2180--2186},
841 Publisher = {American Physical Society},
842 Title = {Number of $S_A$ phases},
843 Url = {http://link.aps.org/doi/10.1103/PhysRevA.24.2180},
844 Volume = {24},
845 Year = {1981},
846 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.24.2180},
847 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.24.2180}}
848
849 @article{Jeu:1983ly,
850 Abstract = {The physical properties and the phase behaviour of some nematic liquid crystals are discussed, with emphasis on the influence of short-range antiparallel dipole correlation that occurs in mesogenic compounds with a strong terminal dipole moment. Evidence for this effect, which stems especially from dielectric studies, is summarized. Variations of the dipole correlation with molecular structure can explain the sometimes unexpected phase behaviour and physical properties of these substances. A qualitative model is given in terms of a monomer--dimer equilibrium.},
851 Author = {Jeu, W. H. De and Raynes, E. P. and Price, A. H. and Clark, M. G.},
852 Date-Added = {2014-01-20 18:30:36 +0000},
853 Date-Modified = {2014-01-20 18:30:39 +0000},
854 Doi = {10.1098/rsta.1983.0035},
855 Eprint = {http://rsta.royalsocietypublishing.org/content/309/1507/217.full.pdf+html},
856 Journal = {Philosophical Transactions of the Royal Society of London. Series A, Mathematical and Physical Sciences},
857 Number = {1507},
858 Pages = {217-229},
859 Title = {Liquid Crystalline Materials: Physical Properties and Intermolecular Interactions [and Discussion]},
860 Url = {http://rsta.royalsocietypublishing.org/content/309/1507/217.abstract},
861 Volume = {309},
862 Year = {1983},
863 Bdsk-Url-1 = {http://rsta.royalsocietypublishing.org/content/309/1507/217.abstract},
864 Bdsk-Url-2 = {http://dx.doi.org/10.1098/rsta.1983.0035}}
865
866 @article{Indekeu:1986ty,
867 Author = {Indekeu, J. O. and Berker, A. Nihat},
868 Date-Added = {2014-01-20 18:27:51 +0000},
869 Date-Modified = {2014-01-20 18:50:31 +0000},
870 Doi = {10.1103/PhysRevA.33.1158},
871 Issue = {2},
872 Journal = {Phys. Rev. A},
873 Month = {Feb},
874 Numpages = {0},
875 Pages = {1158--1162},
876 Publisher = {American Physical Society},
877 Title = {Quadruple reentrance (nematic-smectic-Ad-nematic-smectic-Ad-nematic-smectic-A1) from the frustrated spin-gas model of liquid crystals},
878 Url = {http://link.aps.org/doi/10.1103/PhysRevA.33.1158},
879 Volume = {33},
880 Year = {1986},
881 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.33.1158},
882 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.33.1158}}
883
884 @incollection{Hardouin:1980yq,
885 Author = {Hardouin, F. and Levelut, A.M. and Benattar, J.J. and Sigaud, G.},
886 Booktitle = {Liquid Crystals of One- and Two-Dimensional Order},
887 Date-Added = {2014-01-20 18:26:57 +0000},
888 Date-Modified = {2014-01-20 18:26:59 +0000},
889 Doi = {10.1007/978-3-642-67848-6_31},
890 Editor = {Helfrich, W. and Heppke, G.},
891 Isbn = {978-3-642-67850-9},
892 Language = {English},
893 Pages = {147-147},
894 Publisher = {Springer Berlin Heidelberg},
895 Series = {Springer Series in Chemical Physics},
896 Title = {X-Ray Investigations of the Smectic A1 --- Smectic A2 Transition},
897 Url = {http://dx.doi.org/10.1007/978-3-642-67848-6_31},
898 Volume = {11},
899 Year = {1980},
900 Bdsk-Url-1 = {http://dx.doi.org/10.1007/978-3-642-67848-6_31}}
901
902 @article{Dowell:1985qf,
903 Author = {Dowell, F.},
904 Date-Added = {2014-01-20 18:25:24 +0000},
905 Date-Modified = {2014-01-20 18:25:26 +0000},
906 Doi = {10.1103/PhysRevA.31.3214},
907 Issue = {5},
908 Journal = {Phys. Rev. A},
909 Month = {May},
910 Numpages = {0},
911 Pages = {3214--3219},
912 Publisher = {American Physical Society},
913 Title = {Effect of longitudinal dipoles in liquid crystals},
914 Url = {http://link.aps.org/doi/10.1103/PhysRevA.31.3214},
915 Volume = {31},
916 Year = {1985},
917 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.31.3214},
918 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.31.3214}}
919
920 @article{Baus:1989fk,
921 Author = {Baus, Marc and Colot, Jean-Louis},
922 Date-Added = {2014-01-20 18:24:36 +0000},
923 Date-Modified = {2014-01-20 18:24:39 +0000},
924 Doi = {10.1103/PhysRevA.40.5444},
925 Issue = {9},
926 Journal = {Phys. Rev. A},
927 Month = {Nov},
928 Numpages = {0},
929 Pages = {5444--5446},
930 Publisher = {American Physical Society},
931 Title = {Ferroelectric nematic liquid-crystal phases of dipolar hard ellipsoids},
932 Url = {http://link.aps.org/doi/10.1103/PhysRevA.40.5444},
933 Volume = {40},
934 Year = {1989},
935 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevA.40.5444},
936 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevA.40.5444}}