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root/group/trunk/COonPt/COonPtAu.bib
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1 %% This BibTeX bibliography file was created using BibDesk.
2 %% http://bibdesk.sourceforge.net/
3
4
5 %% Created for Dan Gezelter at 2013-03-13 15:13:24 -0400
6
7
8 %% Saved with string encoding Unicode (UTF-8)
9
10
11 @string{acp = {Adv. Chem. Phys.}}
12
13 @string{bj = {Biophys. J.}}
14
15 @string{ccp5 = {CCP5 Information Quarterly}}
16
17 @string{cp = {Chem. Phys.}}
18
19 @string{cpl = {Chem. Phys. Lett.}}
20
21 @string{ea = {Electrochim. Acta}}
22
23 @string{jacs = {J. Am. Chem. Soc.}}
24
25 @string{jbc = {J. Biol. Chem.}}
26
27 @string{jcat = {J. Catalysis}}
28
29 @string{jcc = {J. Comp. Chem.}}
30
31 @string{jcop = {J. Comp. Phys.}}
32
33 @string{jcp = {J. Chem. Phys.}}
34
35 @string{jctc = {J. Chem. Theory Comp.}}
36
37 @string{jmc = {J. Med. Chem.}}
38
39 @string{jml = {J. Mol. Liq.}}
40
41 @string{jmm = {J. Mol. Model.}}
42
43 @string{jpc = {J. Phys. Chem.}}
44
45 @string{jpca = {J. Phys. Chem. A}}
46
47 @string{jpcb = {J. Phys. Chem. B}}
48
49 @string{jpcc = {J. Phys. Chem. C}}
50
51 @string{jpcl = {J. Phys. Chem. Lett.}}
52
53 @string{mp = {Mol. Phys.}}
54
55 @string{pams = {Proc. Am. Math Soc.}}
56
57 @string{pccp = {Phys. Chem. Chem. Phys.}}
58
59 @string{pnas = {Proc. Natl. Acad. Sci. USA}}
60
61 @string{pr = {Phys. Rev.}}
62
63 @string{pra = {Phys. Rev. A}}
64
65 @string{prb = {Phys. Rev. B}}
66
67 @string{pre = {Phys. Rev. E}}
68
69 @string{prl = {Phys. Rev. Lett.}}
70
71 @string{rmp = {Rev. Mod. Phys.}}
72
73 @string{ss = {Surf. Sci.}}
74
75
76 @article{Au:melting,
77 Author = {E. Ahmed and J.I. Akhter and M. Ahmad},
78 Date-Added = {2013-03-13 14:10:22 +0000},
79 Date-Modified = {2013-03-13 14:11:17 +0000},
80 Journal = {Computational Materials Science},
81 Pages = {309-316},
82 Title = {Molecular dynamics study of thermal properties of noble metals},
83 Volume = {31},
84 Year = {2003}}
85
86 @article{Pt:melting,
87 Author = {Chandrani Bhattacharya and M.K. Srivastava and S.V.G. Menon},
88 Date-Added = {2013-03-13 14:05:19 +0000},
89 Date-Modified = {2013-03-13 14:10:16 +0000},
90 Journal = {Physica B: Condensed Matter},
91 Month = {July},
92 Pages = {4035-4040},
93 Title = {Melting curves of FCC-metals by cell-theory},
94 Volume = {406},
95 Year = {2011}}
96
97 @article{Peters:2000,
98 Author = {K.F. Peters and P. Steadman and H. Isern and J. Alvarez and S. Ferrer},
99 Date-Added = {2013-03-07 15:24:56 +0000},
100 Date-Modified = {2013-03-07 15:26:12 +0000},
101 Journal = {Surface Science},
102 Keywords = {Au CO reconstruction},
103 Month = {August},
104 Pages = {10-22},
105 Title = {Elevated-pressure chemical reactivity of carbon monoxide over Au(111)},
106 Volume = {467},
107 Year = {2000}}
108
109 @article{Piccolo:2004,
110 Author = {L. Piccolo and D. Loffreda and F. J. Cadete Santos Aires and C. Deranlot and Y. Jugnet and P. Sautet and J. C. Bertolini},
111 Date-Added = {2013-03-06 21:18:06 +0000},
112 Date-Modified = {2013-03-06 21:24:15 +0000},
113 Journal = {Surface Science},
114 Keywords = {Au and (111) and CO},
115 Month = {June},
116 Pages = {995-1000},
117 Title = {The adsorption of CO on Au(111) at elevated pressures studied by STM, RAIRS, and DFT calculations},
118 Volume = {566-568},
119 Year = {2004}}
120
121 @article{StreitzMintmire:1994,
122 Author = {F. H. Streitz and J. W. Mintmire},
123 Date-Added = {2013-02-28 15:09:44 +0000},
124 Date-Modified = {2013-02-28 15:11:07 +0000},
125 Journal = {Phys. Rev. B},
126 Month = {October},
127 Number = {16},
128 Pages = {11996-12003},
129 Title = {Electrostatic potentials for metal-oxide surfaces and interfaces},
130 Volume = {50},
131 Year = {1994}}
132
133 @article{Williams:1994,
134 Author = {Ellen D. Williams},
135 Date-Added = {2013-02-20 19:36:23 +0000},
136 Date-Modified = {2013-02-20 19:38:05 +0000},
137 Journal = {Surface Science},
138 Pages = {502-524},
139 Rating = {5},
140 Title = {Surface steps and surface morphology: understanding macroscopic phenomena from atomic observations},
141 Volume = {299/300},
142 Year = {1994}}
143
144 @article{Williams:1991,
145 Author = {Ellen D. Williams and N. C. Bartelt},
146 Date-Added = {2013-02-20 18:53:30 +0000},
147 Date-Modified = {2013-02-20 18:55:16 +0000},
148 Journal = {Science},
149 Keywords = {steps},
150 Month = {January},
151 Pages = {393-400},
152 Title = {Thermodynamics of Surface Morphology},
153 Volume = {251},
154 Year = {1991}}
155
156 @article{Pearl,
157 Author = {T. P. Pearl and S. J. Sibener},
158 Date-Added = {2013-01-21 21:18:40 +0000},
159 Date-Modified = {2013-01-21 21:20:29 +0000},
160 Journal = {J. Chem. Phys.},
161 Keywords = {Zipper},
162 Month = {July},
163 Number = {4},
164 Pages = {1916},
165 Title = {Oxygen driven reconstruction dynamics of Ni(977) measured by time-lapse scanning tunneling microscopy},
166 Volume = {115},
167 Year = {2001}}
168
169 @article{McCarthy:2012,
170 Author = {D. N. McCarthy and C. E. Strebel and T. P. Johansson and A. den Dunnen and A. Nierhoff and J. H. Nielsen and Ib Chorkendorff},
171 Date-Added = {2013-01-09 20:03:45 +0000},
172 Date-Modified = {2013-01-09 20:06:33 +0000},
173 Journal = {J. Phys. Chem. C},
174 Keywords = {Mobility},
175 Month = {June},
176 Pages = {15353},
177 Title = {Structural Modification of Platinum Model Systems under High Pressure CO Annealing},
178 Volume = {116},
179 Year = {2012}}
180
181 @article{PhysRevB.13.5188,
182 Author = {Monkhorst, Hendrik J. and Pack, James D.},
183 Date-Added = {2012-12-14 16:27:06 +0000},
184 Date-Modified = {2012-12-14 16:27:06 +0000},
185 Doi = {10.1103/PhysRevB.13.5188},
186 Journal = prb,
187 Month = {Jun},
188 Number = {12},
189 Numpages = {4},
190 Pages = {5188--5192},
191 Publisher = {American Physical Society},
192 Title = {Special points for Brillouin-zone integrations},
193 Volume = {13},
194 Year = {1976},
195 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.13.5188}}
196
197 @article{PhysRevB.59.1758,
198 Author = {Kresse, G. and Joubert, D.},
199 Date-Added = {2012-12-14 16:26:58 +0000},
200 Date-Modified = {2012-12-14 16:26:58 +0000},
201 Doi = {10.1103/PhysRevB.59.1758},
202 Journal = prb,
203 Month = {Jan},
204 Number = {3},
205 Numpages = {17},
206 Pages = {1758--1775},
207 Publisher = {American Physical Society},
208 Title = {From ultrasoft pseudopotentials to the projector augmented-wave method},
209 Volume = {59},
210 Year = {1999},
211 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.59.1758}}
212
213 @article{PhysRevB.50.17953,
214 Author = {Bl\"ochl, P. E.},
215 Date-Added = {2012-12-14 16:26:51 +0000},
216 Date-Modified = {2012-12-14 16:26:51 +0000},
217 Doi = {10.1103/PhysRevB.50.17953},
218 Journal = prb,
219 Month = {Dec},
220 Number = {24},
221 Numpages = {26},
222 Pages = {17953--17979},
223 Publisher = {American Physical Society},
224 Title = {Projector augmented-wave method},
225 Volume = {50},
226 Year = {1994},
227 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.50.17953}}
228
229 @article{Tao2008,
230 Author = {F. Tao and M.~E. Grass and Y. Zhang and D.~R. Butcher and J.~R. Renzas and Z. Liu and J.~Y. Chung and B. S. Mun and M. Salmeron and G.~A. Somorjai},
231 Date-Added = {2012-12-15 22:06:57 +0000},
232 Date-Modified = {2012-12-15 22:12:10 +0000},
233 Journal = {Science},
234 Month = {November},
235 Pages = {932},
236 Title = {Reaction-Driven Restructuring of Rh-Pd and Pt-Pd Core-Shell Nanoparticles},
237 Volume = {322},
238 Year = {2008}}
239
240 @article{Tao2011,
241 Author = {F. Tao and M. Salmeron},
242 Date-Added = {2012-12-15 22:05:07 +0000},
243 Date-Modified = {2012-12-15 22:06:26 +0000},
244 Journal = {Science},
245 Month = {Jan},
246 Pages = {171},
247 Title = {In Situ Studies of Chemistry and Structure of Materials in Reactive Environments},
248 Volume = {331},
249 Year = {2011}}
250
251 @inbook{TPDGold,
252 Author = {G.~S. Elliott and D.~R. Miller},
253 Booktitle = {Rarefied gas dynamics},
254 Editor = {H. Oguchi},
255 Pages = {349--58},
256 Publisher = {University of Tokyo Press},
257 Series = {Proc. 14th Int. Symp. on Rarefied Gas Dynamics},
258 Title = {Helium Scattering from \ce{CO} Adsorbed on \ce{Au}(111)},
259 Volume = {1},
260 Year = {1984}}
261
262 @article{Ewald,
263 Author = {C. J. Fennell and J. D. Gezelter},
264 Date-Added = {2012-12-14 04:22:33 +0000},
265 Date-Modified = {2012-12-14 04:23:31 +0000},
266 Journal = {J. Chem. Phys.},
267 Keywords = {Ewald and OpenMD},
268 Month = {June},
269 Pages = {234104},
270 Title = {Is the Ewald summation still necessary? Pairwise alternatives to the accepted standard for long-range electrostatics},
271 Volume = {124},
272 Year = {2006}}
273
274 @article{OOPSE,
275 Author = {Meineke, Matthew A. and Vardeman, Charles F. and Lin, Teng and Fennell, Christopher J. and Gezelter, J. Daniel},
276 Date-Added = {2012-12-14 04:19:33 +0000},
277 Date-Modified = {2012-12-14 04:19:40 +0000},
278 Doi = {10.1002/jcc.20161},
279 Issn = {1096-987X},
280 Journal = {Journal of Computational Chemistry},
281 Keywords = {OOPSE, molecular dynamics},
282 Number = {3},
283 Pages = {252--271},
284 Publisher = {Wiley Subscription Services, Inc., A Wiley Company},
285 Title = {OOPSE: An object-oriented parallel simulation engine for molecular dynamics},
286 Url = {http://dx.doi.org/10.1002/jcc.20161},
287 Volume = {26},
288 Year = {2005},
289 Bdsk-Url-1 = {http://dx.doi.org/10.1002/jcc.20161}}
290
291 @article{Monkhorst:1976,
292 Author = {Monkhorst, Hendrik J. and Pack, James D.},
293 Date-Added = {2012-12-14 02:25:00 +0000},
294 Date-Modified = {2012-12-14 02:25:11 +0000},
295 Doi = {10.1103/PhysRevB.13.5188},
296 Issue = {12},
297 Journal = {Phys. Rev. B},
298 Month = {Jun},
299 Pages = {5188--5192},
300 Publisher = {American Physical Society},
301 Title = {Special points for Brillouin-zone integrations},
302 Url = {http://link.aps.org/doi/10.1103/PhysRevB.13.5188},
303 Volume = {13},
304 Year = {1976},
305 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevB.13.5188},
306 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevB.13.5188}}
307
308 @article{Perdew_GGA,
309 Author = {Perdew, John P. and Burke, Kieron and Ernzerhof, Matthias},
310 Date-Added = {2012-12-14 01:59:04 +0000},
311 Date-Modified = {2012-12-14 01:59:12 +0000},
312 Doi = {10.1103/PhysRevLett.77.3865},
313 Issue = {18},
314 Journal = {Phys. Rev. Lett.},
315 Month = {Oct},
316 Pages = {3865--3868},
317 Publisher = {American Physical Society},
318 Title = {Generalized Gradient Approximation Made Simple},
319 Url = {http://link.aps.org/doi/10.1103/PhysRevLett.77.3865},
320 Volume = {77},
321 Year = {1996},
322 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevLett.77.3865},
323 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevLett.77.3865}}
324
325 @article{RRKJ_PP,
326 Author = {Rappe, Andrew M. and Rabe, Karin M. and Kaxiras, Efthimios and Joannopoulos, J. D.},
327 Date-Added = {2012-12-14 01:39:59 +0000},
328 Date-Modified = {2012-12-14 01:40:21 +0000},
329 Doi = {10.1103/PhysRevB.41.1227},
330 Issue = {2},
331 Journal = {Phys. Rev. B},
332 Month = {Jan},
333 Pages = {1227--1230},
334 Publisher = {American Physical Society},
335 Title = {Optimized pseudopotentials},
336 Url = {http://link.aps.org/doi/10.1103/PhysRevB.41.1227},
337 Volume = {41},
338 Year = {1990},
339 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevB.41.1227},
340 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevB.41.1227}}
341
342 @article{QE-2009,
343 Author = {Paolo Giannozzi and Stefano Baroni and Nicola Bonini and Matteo Calandra and Roberto Car and Carlo Cavazzoni and Davide Ceresoli and Guido L Chiarotti and Matteo Cococcioni and Ismaila Dabo and Andrea {Dal Corso} and Stefano de Gironcoli and Stefano Fabris and Guido Fratesi and Ralph Gebauer and Uwe Gerstmann and Christos Gougoussis and Anton Kokalj and Michele Lazzeri and Layla Martin-Samos and Nicola Marzari and Francesco Mauri and Riccardo Mazzarello and Stefano Paolini and Alfredo Pasquarello and Lorenzo Paulatto and Carlo Sbraccia and Sandro Scandolo and Gabriele Sclauzero and Ari P Seitsonen and Alexander Smogunov and Paolo Umari and Renata M Wentzcovitch},
344 Date-Added = {2012-12-14 01:34:50 +0000},
345 Date-Modified = {2012-12-14 01:34:50 +0000},
346 Journal = {Journal of Physics: Condensed Matter},
347 Number = {39},
348 Pages = {395502 (19pp)},
349 Title = {QUANTUM ESPRESSO: a modular and open-source software project for quantum simulations of materials},
350 Url = {http://www.quantum-espresso.org},
351 Volume = {21},
352 Year = {2009},
353 Bdsk-Url-1 = {http://www.quantum-espresso.org}}
354
355 @article{Deshlahra:2012,
356 Author = {P. Deshlahra and J. Conway and E. E. Wolf and W. F. Schneider},
357 Date-Added = {2012-12-13 20:31:25 +0000},
358 Date-Modified = {2012-12-13 20:32:44 +0000},
359 Journal = {Langumuir},
360 Keywords = {Dipole Interactions CO Pt},
361 Month = {April},
362 Pages = {8408},
363 Title = {Influence of Dipole-Dipole Interactions on Coverage-Dependent Adsorption: CO and NO on Pt(111)},
364 Volume = {28},
365 Year = {2012}}
366
367 @article{Mason:2004,
368 Author = {S. E. Mason and I. Grinberg and A. M. Rappe},
369 Date-Added = {2012-12-13 20:23:19 +0000},
370 Date-Modified = {2012-12-13 20:24:28 +0000},
371 Journal = {Phys. Rev. B},
372 Keywords = {CO},
373 Month = {April},
374 Pages = {161401},
375 Title = {First-principles extrapolation method for accurate CO adsorption energies on metal surfaces},
376 Volume = {69},
377 Year = {2004}}
378
379 @article{Deshlahra:2009,
380 Author = {P. Deshlahra and E. E. Wolf and W. F. Schneider},
381 Date-Added = {2012-12-13 20:06:26 +0000},
382 Date-Modified = {2012-12-13 20:07:35 +0000},
383 Journal = {J. Phys. Chem. A},
384 Keywords = {DFT CO Electric Fields},
385 Month = {February},
386 Pages = {4125},
387 Title = {A Periodic Density Functional Theory Analysis of CO Chemisorption on Pt(111) in the Presence of Uniform Electric Fields},
388 Volume = {113},
389 Year = {2009},
390 Bdsk-File-1 = {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}}
391
392 @article{Ertl:1977,
393 Author = {G. Ertl and M. Neumann and K.M. Streit},
394 Date-Added = {2012-12-13 20:00:24 +0000},
395 Date-Modified = {2012-12-13 20:01:14 +0000},
396 Journal = {Surface Science},
397 Keywords = {CO Pt(111)},
398 Month = {January},
399 Pages = {393},
400 Title = {Chemisorption of CO on the Pt(111) Surface},
401 Volume = {64},
402 Year = {1977},
403 Bdsk-File-1 = {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}}
404
405 @article{Hopster:1978,
406 Author = {H. Hopster and H. Ibach},
407 Date-Added = {2012-12-13 19:51:30 +0000},
408 Date-Modified = {2012-12-13 19:53:17 +0000},
409 Journal = {Surface Science},
410 Keywords = {EELS CO Pt},
411 Month = {April},
412 Pages = {109},
413 Title = {Adsorption of CO on Pt(111) and Pt 6(111) X (111) Studied by High Resolution Electron Energy Loss Spectroscopy and Thermal Desorption Spectroscopy},
414 Volume = {77},
415 Year = {1978},
416 Bdsk-File-1 = {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}}
417
418 @article{Pons:1986,
419 Author = {C. Korzeniewski and S. Pons and P. P. Schmidt and M. W. Severson},
420 Date-Added = {2012-12-13 18:56:39 +0000},
421 Date-Modified = {2012-12-13 18:58:47 +0000},
422 Journal = {J. Chem. Phys.},
423 Keywords = {CO parameters},
424 Month = {June},
425 Pages = {4153},
426 Title = {A theoretical analysis of the vibrational spectrum of carbon monoxide on platinum metal electrodes},
427 Volume = {85},
428 Year = {1986}}
429
430 @article{QuadrupoleCOCalc,
431 Author = {A. Rizzo and S. Coriani and A. Halkier and C. H{\"a}ttig},
432 Date-Added = {2012-12-13 17:53:33 +0000},
433 Date-Modified = {2012-12-13 18:59:05 +0000},
434 Journal = {J. Chem. Phys.},
435 Keywords = {Quadrupole; Ab initio},
436 Month = {May},
437 Pages = {3077},
438 Title = {Ab initio study of the electric-field-gradient-indeuced birefringence of a polar molecule: CO},
439 Volume = {113},
440 Year = {2000}}
441
442 @article{QuadrupoleCO,
443 Author = {N. Chetty and V.~W. Couling},
444 Date-Added = {2012-12-12 21:36:59 +0000},
445 Date-Modified = {2012-12-12 21:38:48 +0000},
446 Journal = {J. Chem. Phys.},
447 Keywords = {CO; Quadrupole},
448 Month = {April},
449 Pages = {164307},
450 Title = {Measurement of the electric quadrupole moment of CO},
451 Volume = {134},
452 Year = {2011}}
453
454 @article{Tao:2010,
455 Abstract = {Stepped single-crystal surfaces are viewed as models of real catalysts, which consist of small metal particles exposing a large number of low-coordination sites. We found that stepped platinum (Pt) surfaces can undergo extensive and reversible restructuring when exposed to carbon monoxide (CO) at pressures above 0.1 torr. Scanning tunneling microscopy and photoelectron spectroscopy studies under gaseous environments near ambient pressure at room temperature revealed that as the CO surface coverage approaches 100%, the originally flat terraces of (557) and (332) oriented Pt crystals break up into nanometer-sized clusters and revert to the initial morphology after pumping out the CO gas. Density functional theory calculations provide a rationale for the observations whereby the creation of increased concentrations of low-coordination Pt edge sites in the formed nanoclusters relieves the strong CO-CO repulsion in the highly compressed adsorbate film. This restructuring phenomenon has important implications for heterogeneous catalytic reactions.},
456 Author = {Tao, Feng and Dag, Sefa and Wang, Lin-Wang and Liu, Zhi and Butcher, Derek R. and Bluhm, Hendrik and Salmeron, Miquel and Somorjai, Gabor A.},
457 Date-Added = {2012-12-10 16:42:01 +0000},
458 Date-Modified = {2012-12-10 16:42:01 +0000},
459 Journal = {Science},
460 Keywords = {Pt CO reconstruction},
461 Number = {5967},
462 Pages = {850-853},
463 Title = {Break-Up of Stepped Platinum Catalyst Surfaces by High CO Coverage},
464 Volume = {327},
465 Year = {2010}}
466
467 @article{Hendriksen:2002,
468 Abstract = {We have used a novel, high-pressure high-temperature scanning tunneling microscope, which is set
469 up as a flow reactor, to determine simultaneously the surface structure and the reactivity of a Pt(110)
470 model catalyst at semirealistic reaction conditions for CO oxidation. By controlled switching from a
471 CO-rich to an O2-rich flow and vice versa, we can reversibly oxidize and reduce the platinum surface.
472 The formation of the surface oxide has a dramatic effect on the CO2 production rate. Our results show
473 that there is a strict one-to-one correspondence between the surface structure and the catalytic activity,
474 and suggest a reaction mechanism which is not observed at low pressures.},
475 Author = {Hendriksen, B.L.M. and Frenken, J.W.M.},
476 Date-Added = {2012-12-10 16:41:58 +0000},
477 Date-Modified = {2012-12-10 16:41:58 +0000},
478 Journal = prl,
479 Keywords = {CO Mars van Krevelen noble metals oxidation oxides tunneling},
480 Pages = {0461011},
481 Title = {CO Oxidation on Pt(110): Scanning Tunneling Microscopy Inside a High-Pressure Flow Reactor},
482 Volume = {89},
483 Year = {2002}}
484
485 @article{Ertl08,
486 Author = {G. Ertl},
487 Date-Added = {2012-12-10 16:41:30 +0000},
488 Date-Modified = {2012-12-10 16:41:30 +0000},
489 Isbn = {1433-7851},
490 Journal = {Angewandte Chemie-International Edition},
491 Junk = {PT: J; TC: 5},
492 Number = {19},
493 Pages = {3524-3535},
494 Title = {Reactions at surfaces: From atoms to complexity (Nobel lecture)},
495 Volume = {47},
496 Year = {2008}}
497
498 @article{ISI:000083924800001,
499 Abstract = {{One of the prominent arguments for performing surface science studies
500 have for many years been to improve and design new and better catalysts.
501 Although surface science has provided the fundamental framework and
502 tools for understanding heterogeneous catalysis until now there have
503 been extremely few examples of actually designing new catalysts based
504 solely on surface science studies. In this review, we shall demonstrate
505 how a close collaboration between different fundamental disciplines like
506 structural-, theoretical-and reactivity-studies of surfaces as well as a
507 strong interaction with industry can have strong synergetic effects and
508 how this was used to develop a new catalyst. As so often before the
509 studies reviewed here were not initiated with the objective to solve a
510 specific problem, but realizing that a new class of very stable
511 two-dimensional alloys could be synthesized from otherwise immiscible
512 metals made it possible to present a new solution to a specific problem
513 in the industrial catalysis relating to methane activation in the steam
514 reforming process. Methane is the main constituent of natural gas and it
515 is an extremely important raw material for many large scale chemical
516 processes such as production of hydrogen, ammonia, and methanol. In the
517 steam reforming process methane and water are converted into a mixture
518 of mainly hydrogen and carbon monoxide, the so-called synthesis gas.
519 Industrially the steam reforming process usually takes place over a
520 catalyst containing small nickel crystallites highly dispersed on a
521 porous support material like aluminum/magnesium oxides in order to
522 achieve a high active metal area. There is a general consensus that the
523 rate limiting step of this process is the dissociative sticking of
524 methane on the nickel surface. Driven by the desire to understand this
525 step and hopefully be able to manipulate the reactivity, a large number
526 of investigations of the methane/nickel interaction have been performed
527 using nickel single crystals as model catalysts. The process has been
528 investigated, both under thermal conditions and by using supersonic
529 molecular beams elucidating the dynamical aspects of the interaction.
530 The results obtained will be reviewed both with respect to the clean and
531 modified nickel surfaces. Especially the two-dimensional gold-nickel
532 alloy system will be considered since the fundamental results here have
533 lead to the invention of a new nickel based catalyst, which is much more
534 resistant to carbon formation than the conventional nickel catalysts.
535 This may be one of the first examples of how fundamental research can
536 lead to the invention of new catalysts. Other overlayer/alloy
537 combinations, their stability, and reactivity are briefly discussed with
538 respect to manipulation of the surface reactivity towards methane. (C)
539 1999 Elsevier Science B.V. All rights reserved.}},
540 Address = {{PO BOX 211, 1000 AE AMSTERDAM, NETHERLANDS}},
541 Affiliation = {{Chorkendorff, I (Reprint Author), Univ Washington, Dept Chem, Seattle, WA 98195 USA.. Tech Univ Denmark, ICAT, Dept Phys,Ctr Atom Scale Mat Phys, Interdisciplinary Res Ctr Catalysis \& Camp, DK-2800 Lyngby, Denmark.}},
542 Author = {Larsen, JH and Chorkendorff, I},
543 Author-Email = {{ibchork@fysik.dtu.dk}},
544 Date-Added = {2012-12-10 16:40:26 +0000},
545 Date-Modified = {2012-12-10 16:40:26 +0000},
546 Doc-Delivery-Number = {{259ZX}},
547 Issn = {{0167-5729}},
548 Journal = {{SURFACE SCIENCE REPORTS}},
549 Journal-Iso = {{Surf. Sci. Rep.}},
550 Keywords-Plus = {{ACTIVATED DISSOCIATIVE CHEMISORPTION; SCANNING-TUNNELING-MICROSCOPY; ELECTRON-ENERGY-LOSS; NI-CU CATALYSTS; MOLECULAR-BEAM; METHANOL SYNTHESIS; CH4 DISSOCIATION; SURFACE SCIENCE; METAL-SURFACES; PRESSURE GAP}},
551 Language = {{English}},
552 Number = {{5-8}},
553 Number-Of-Cited-References = {{169}},
554 Pages = {{165-222}},
555 Publisher = {{ELSEVIER SCIENCE BV}},
556 Research-Areas = {{Chemistry; Physics}},
557 Researcherid-Numbers = {{Nielsen, Jane/A-9089-2011 Chorkendorff, Ib/C-7282-2008}},
558 Times-Cited = {{54}},
559 Title = {{From fundamental studies of reactivity on single crystals to the design of catalysts}},
560 Type = {{Review}},
561 Unique-Id = {{ISI:000083924800001}},
562 Volume = {{35}},
563 Web-Of-Science-Categories = {{Chemistry, Physical; Physics, Condensed Matter}},
564 Year = {{1999}}}
565
566 @article{ISI:000083038000001,
567 Abstract = {{The properties of steps in thermal equilibrium are described in the
568 context of prediction of the stability and evolution of nanostructures
569 on surfaces. Experimental techniques for measuring the appropriate step
570 parameters are described, and simple lattice models for interpreting the
571 observations are reviewed. The concept of the step chemical potential
572 and its application to the prediction of step motion (and therefore
573 surface mass transport) is presented in depth. Examples of the
574 application of this step-continuum approach to experimental observations
575 of evolution of surface morphology are presented for morphological phase
576 transitions, the decay of metastable structures, and the spontaneous
577 evolution of metastable structure due to kinetic instabilities. (C) 1999
578 Elsevier Science B.V. All rights reserved.}},
579 Address = {{PO BOX 211, 1000 AE AMSTERDAM, NETHERLANDS}},
580 Affiliation = {{Williams, ED (Reprint Author), Univ Maryland, Mat Res Sci \& Engn Ctr, College Pk, MD 20742 USA.. Univ Maryland, Mat Res Sci \& Engn Ctr, College Pk, MD 20742 USA. Sejong Univ, Dept Phys, Seoul 143747, South Korea.}},
581 Author = {Jeong, HC and Williams, ED},
582 Author-Email = {{edw@physics.umd.edu}},
583 Date-Added = {2012-12-10 16:39:10 +0000},
584 Date-Modified = {2012-12-10 16:39:10 +0000},
585 Doc-Delivery-Number = {{244EC}},
586 Doi = {{10.1016/S0167-5729(98)00010-7}},
587 Issn = {{0167-5729}},
588 Journal = {{SURFACE SCIENCE REPORTS}},
589 Journal-Iso = {{Surf. Sci. Rep.}},
590 Keywords-Plus = {{SCANNING-TUNNELING-MICROSCOPY; VICINAL SI(111) SURFACES; REFLECTION ELECTRON-MICROSCOPY; ORIENTATIONAL PHASE-DIAGRAM; X-RAY-SCATTERING; TERRACE-WIDTH DISTRIBUTIONS; EQUILIBRIUM CRYSTAL SHAPE; SILICON SURFACES; ROUGHENING TRANSITION; METAL-SURFACES}},
591 Language = {{English}},
592 Number = {{6-8}},
593 Number-Of-Cited-References = {{343}},
594 Pages = {{171-294}},
595 Publisher = {{ELSEVIER SCIENCE BV}},
596 Research-Areas = {{Chemistry; Physics}},
597 Times-Cited = {{419}},
598 Title = {{Steps on surfaces: experiment and theory}},
599 Type = {{Review}},
600 Unique-Id = {{ISI:000083038000001}},
601 Volume = {{34}},
602 Web-Of-Science-Categories = {{Chemistry, Physical; Physics, Condensed Matter}},
603 Year = {{1999}},
604 Bdsk-Url-1 = {http://dx.doi.org/10.1016/S0167-5729(98)00010-7%7D}}
605
606 @article{PhysRevB.37.3924,
607 Author = {Johnson, R. A.},
608 Date-Added = {2012-12-10 16:21:17 +0000},
609 Date-Modified = {2012-12-10 16:21:17 +0000},
610 Doi = {10.1103/PhysRevB.37.3924},
611 Journal = prb,
612 Month = {Mar},
613 Number = {8},
614 Numpages = {7},
615 Pages = {3924--3931},
616 Publisher = {American Physical Society},
617 Title = {Analytic nearest-neighbor model for fcc metals},
618 Volume = {37},
619 Year = {1988},
620 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.37.3924}}
621
622 @article{mishin01:cu,
623 Abstract = {We evaluate the ability of the embedded-atom method (EAM) potentials and the tight-binding (TB) method to predict reliably energies and stability of nonequilibrium structures by taking Cu as a model material. Two EAM potentials are used here. One is constructed in this work by using more fitting parameters than usual and including {\em ab initio} energies in the fitting database. The other potential was constructed previously using a traditional scheme. Excellent agreement is observed between {\em ab initio}, TB, and EAM results for the energies and stability of several nonequilibrium structures of Cu, as well as for energies along deformation paths between different structures. We conclude that not only TB calculations but also EAM potentials can be suitable for simulations in which correct energies and stability of different atomic configurations are essential, at least for Cu. The bcc, simple cubic, and diamond structures of Cu were identified as elastically unstable, while some other structures (e.g., hcp and 9R) are metastable. As an application of this analysis, nonequilibrium structures of epitaxial Cu films on (001)-oriented fcc or bcc substrates are evaluated using a simple model and atomistic simulations with an EAM potential. In agreement with experimental data, the structure of the film can be either deformed fcc or deformed hcp. The bcc structure cannot be stabilized by epitaxial constraints.},
624 Author = {Y. Mishin and M. J. Mehl and D. A. Papaconstantopoulos and A. F. Voter and J. D. Kress},
625 Date-Added = {2012-12-10 16:20:51 +0000},
626 Date-Modified = {2012-12-10 16:20:51 +0000},
627 Journal = prb,
628 Month = {June},
629 Pages = 224106,
630 Title = {Structural stability and lattice defects in copper: {\em Ab initio}, tight-binding, and embed-ded-atom methods},
631 Url = {http://link.aps.org/abstract/PRB/v63/e224106},
632 Volume = 63,
633 Year = 2001,
634 Bdsk-Url-1 = {http://link.aps.org/abstract/PRB/v63/e224106}}
635
636 @article{mishin02:b2nial,
637 Abstract = {An embedded-atom potential has been constructed for the intermetallic compound B2-NiAl by fitting to both experimental properties and {\em ab initio} data. The {\em ab initio} data have been generated in the form of energy-volume relations for a number of alternative structures of NiAl and Ni$_3$Al, as well as for Ni and Al. The potential accurately reproduces the basic lattice properties of B2-NiAl, planar faults, and point-defect characteristics. It also reproduces the energetics and stability of all other structures included in the fit. The potential is applied to calculate equilibrium point-defect concentrations in B2-NiAl as functions of temperature and composition near the stoichiometry. In contrast to previous calculations, the defect formation entropies arising from atomic vibrations are included in our calculation within the quasiharmonic approximation. Such entropies tend to increase the concentrations of thermal point defects in B2-NiAl at high temperatures, but the atomic disorder mechanism remains triple-defect type up to the melting point.},
638 Author = {Y. Mishin and M. J. Mehl and D. A. Papaconstantopoulos},
639 Date-Added = {2012-12-10 16:20:51 +0000},
640 Date-Modified = {2012-12-10 16:20:51 +0000},
641 Journal = prb,
642 Month = {June},
643 Number = 22,
644 Pages = 224114,
645 Title = {Embedded-atom potential for B2-NiAl},
646 Url = {http://link.aps.org/abstract/PRB/v65/e224114},
647 Volume = 65,
648 Year = 2002,
649 Bdsk-Url-1 = {http://link.aps.org/abstract/PRB/v65/e224114}}
650
651 @article{mishin05:phase_fe_ni,
652 Abstract = {First-principles calculations of the energy of various crystal structures of Fe, Ni and ordered Fe\x{2013}Ni compounds with different stoichiometries have been performed by the linearized augmented plane wave (LAPW) method in the generalized gradient approximation. The most stable compounds are L12\x{2013}Ni3Fe, L10\x{2013}FeNi, C11f\x{2013}Ni2Fe and C11f\x{2013}Fe2Ni. The L12\x{2013}Ni3Fe compound has the largest negative formation energy, which is consistent with the experimental Fe\x{2013}Ni phase diagram. The L10\x{2013}FeNi compound has also been observed experimentally in meteorite samples as a metastable phase. It is suggested here that the C11f compounds could also form in Fe\x{2013}Ni alloys at low temperatures. A new semi-empirical interatomic potential has been developed for the Fe\x{2013}Ni system by fitting to experimental data and the results of the LAPW calculations. Recognizing the significance of the covalent component of bonding in this system, the potential is based on the embedded-atom method (EAM) but additionally includes a bond-angle dependence. In comparison with the existing modified EAM method, our potential form is simpler, extends interactions to several (3\x{2013}5) coordination shells and replaces the screening procedure by a smooth cutoff of the potential functions. The potential reproduces a variety of properties of Fe and Ni with a reasonable accuracy. It also reproduces all stability trends across the Fe\x{2013}Ni system established by the LAPW calculations. The potential can be useful in atomistic simulations of the phases of the Fe\x{2013}Ni system.},
653 Author = {Y. Mishin and M.J. Mehl and D.A. Papaconstantopoulos},
654 Date-Added = {2012-12-10 16:20:51 +0000},
655 Date-Modified = {2012-12-10 16:20:51 +0000},
656 Journal = {Acta Mat.},
657 Month = {September},
658 Number = 15,
659 Pages = {4029-4041},
660 Title = {Phase stability in the Fe-Ni system: Investigation by first-principles calculations and atomistic simulations},
661 Url = {http://dx.doi.org/10.1016/j.actamat.2005.05.001},
662 Volume = 53,
663 Year = 2005,
664 Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.actamat.2005.05.001}}
665
666 @article{mishin99:_inter,
667 Abstract = {We demonstrate an approach to the development of many-body interatomic potentials for monoatomic metals with improved accuracy and reliability. The functional form of the potentials is that of the embedded-atom method, but the interesting features are as follows: (1) The database used for the development of a potential includes both experimental data and a large set of energies of different alternative crystalline structures of the material generated by {\em ab initio} calculations. We introduce a rescaling of interatomic distances in an attempt to improve the compatibility between experimental and {\em ab initio} data. (2) The optimum parametrization of the potential for the given database is obtained by alternating the fitting and testing steps. The testing step includes a comparison between the {\em ab initio} structural energies and those predicted by the potential. This strategy allows us to achieve the best accuracy of fitting within the intrinsic limitations of the potential model. Using this approach we develop reliable interatomic potentials for Al and Ni. The potentials accurately reproduce basic equilibrium properties of these metals, the elastic constants, the phonon-dispersion curves, the vacancy formation and migration energies, the stacking fault energies, and the surface energies. They also predict the right relative stability of different alternative structures with coordination numbers ranging from 12 to 4. The potentials are expected to be easily transferable to different local environments encountered in atomistic simulations of lattice defects. },
668 Author = {Y. Mishin and D. Farkas and M. J. Mehl and D. A. Papaconstantopoulos},
669 Date-Added = {2012-12-10 16:20:51 +0000},
670 Date-Modified = {2012-12-10 16:20:51 +0000},
671 Journal = prb,
672 Number = 5,
673 Pages = {3393-3407},
674 Title = {Interatomic potentials for monoatomic metals from experimental data and ab initio calculations},
675 Url = {http://link.aps.org/abstract/PRB/v59/p3393},
676 Volume = 59,
677 Year = 1999,
678 Bdsk-Url-1 = {http://link.aps.org/abstract/PRB/v59/p3393}}
679
680 @article{zope03:tial_ap,
681 Abstract = {Semiempirical interatomic potentials have been developed for Al, $\alpha$-Ti, and $\gamma$-TiAl within the embedded atom method (EAM) formalism by fitting to a large database of experimental as well as ab initio data. The ab initio calculations were performed by the linearized augmented plane wave (LAPW) method within the density functional theory to obtain the equations of state for a number of crystal structures of the Ti-Al system. Some of the calculated LAPW energies were used for fitting the potentials while others for examining their quality. The potentials correctly predict the equilibrium crystal structures of the phases and accurately reproduce their basic lattice properties. The potentials are applied to calculate the energies of point defects, surfaces, and planar faults in the equilibrium structures. Unlike earlier EAM potentials for the Ti-Al system, the proposed potentials provide a reasonable description of the lattice thermal expansion, demonstrating their usefulness for molecular-dynamics and Monte Carlo simulations at high temperatures. The energy along the tetragonal deformation path (Bain transformation) in $\gamma$-TiAl calculated with the EAM potential is in fairly good agreement with LAPW calculations. Equilibrium point defect concentrations in $\gamma$-TiAl are studied using the EAM potential. It is found that antisite defects strongly },
682 Author = {Rajendra R. Zope and Y. Mishin},
683 Date-Added = {2012-12-10 16:20:51 +0000},
684 Date-Modified = {2012-12-10 16:20:51 +0000},
685 Journal = prb,
686 Month = {July},
687 Pages = 024102,
688 Title = {Interatomic potentials for atomistic simulations of the Ti-Al system},
689 Url = {http://link.aps.org/abstract/PRB/v68/e024102},
690 Volume = 68,
691 Year = 2003,
692 Bdsk-Url-1 = {http://link.aps.org/abstract/PRB/v68/e024102}}
693
694 @article{Shibata:2002hh,
695 Abstract = {We report on systematic studies of size-dependent alloy formation of silver-coated gold nanoparticles (NPs) in aqueous solution at ambient temperature using X-ray absorption fine structure spectroscopy (XAFS). Various Au-core sizes (2.5-20 nm diameter) and Ag shell thicknesses were synthesized using radiolytic wet techniques. The equilibrium structures (alloy versus core-shell) of these NPs were determined in the suspensions. We observed remarkable size dependence in the room temperature interdiffusion of the two metals. The interdiffusion is limited to the subinterface layers of the bimetallic NPs and depends on both the core size and the total particle size. For the very small particles (less than or equal to4.6 nm initial Au-core size), the two metals are nearly randomly distributed within the particle. However, even for these small Au-core NPs, the interdiffusion occurs primarily in the vicinity of the original interface. Features from the Ag shells do remain. For the larger particles, the boundary is maintained to within one monolayer. These results cannot be explained either by enhanced self-diffusion that results from depression of the melting point with size or by surface melting of the NPs. We propose that defects, such as vacancies, at the bimetallic interface enhance the radial migration (as well as displacement around the interface) of one metal into the other. Molecular dynamics calculations correctly predict the activation energy for diffusion of the metals in the absence of vacancies and show an enormous dependence of the rate of mixing on defect levels. They also suggest that a few percent of the interfacial lattice sites need to be vacant to explain the observed mixing.},
696 Address = {1155 16TH ST, NW, WASHINGTON, DC 20036 USA},
697 Author = {Shibata, T and Bunker, BA and Zhang, ZY and Meisel, D and {Vardeman II}, C.F. and Gezelter, JD},
698 Date = {OCT 9 2002},
699 Date-Added = {2012-12-10 16:20:36 +0000},
700 Date-Modified = {2012-12-10 16:20:36 +0000},
701 Doi = {DOI 10.1021/ja025764r},
702 Journal = jacs,
703 Pages = {11989-11996},
704 Publisher = {AMER CHEMICAL SOC},
705 Timescited = {75},
706 Title = {Size-dependent spontaneous alloying of Au-Ag nanoparticles},
707 Volume = {124},
708 Year = {2002},
709 Bdsk-Url-1 = {http://dx.doi.org/10.1021/ja025764r}}
710
711 @article{BECQUART:1993rg,
712 Abstract = {Molecular dynamics simulations of fracture have been performed on the metals Al and Nb, and the intermetallic alloys RuAl, Nb3Al and NiAl. The forces and energies were modelled with embedded atom method potentials. The increasing external stress was applied using displacements of the outer boundaries of the array, calculated by anisotropic elasticity theory, until the pre-existing cracks propagated or dislocation nucleation occurred. The resulting critical stress intensity factor was calculated at various orientations and temperatures, and the results compared with theory. Observations of slip systems are reported, as well as values for surface energies and ''unstable stacking'' energies.},
713 Address = {PO BOX 564, 1001 LAUSANNE 1, SWITZERLAND},
714 Author = {Becquart, C.~S. and Kim, D and Rifkin, J.~A. and Clapp, P.~C.},
715 Date = {OCT 1 1993},
716 Date-Added = {2012-12-10 16:20:27 +0000},
717 Date-Modified = {2012-12-10 16:20:27 +0000},
718 Journal = {Materials Science and Engineering A-Structural Materials Properties Microstructure and Processing},
719 Pages = {87-94},
720 Publisher = {ELSEVIER SCIENCE SA LAUSANNE},
721 Timescited = {8},
722 Title = {Fracture Properties Of Metals And Alloys From Molecular-Dynamics Simulations},
723 Volume = {170},
724 Year = {1993}}
725
726 @inbook{Rifkin1992,
727 Author = {J.~A. Rifkin and C.~S. Becquart and D. Kim and P.~C. Clapp},
728 Booktitle = {Computational Methods in Materials Science},
729 Date-Added = {2012-12-10 16:20:27 +0000},
730 Date-Modified = {2012-12-10 16:20:27 +0000},
731 Pages = {173},
732 Series = {MRS Symp. Proc.},
733 Title = {Dislocation Generation and Crack Propagation in Metals Examined in Molecular Dynamics Simulations},
734 Volume = {278},
735 Year = {1992}}
736
737 @article{Shastry:1996qg,
738 Abstract = {The behaviour of mode I cracks in alpha-Fe is investigated using molecular statics computer simulation methods with an EAM potential. A double-ended crack of finite size embedded in a cylindrical simulation cell and fixed boundary conditions are prescribed along the periphery of the cell, whereas periodic boundary conditions are imposed parallel to the crack front. The displacement held of the finite crack is represented by that of an equivalent pile-up of opening dislocations distributed in a manner consistent with the anisotropy of the crystal and traction-free conditions of the crack faces. The crack lies on the {110} plane and the crack front is located along [100], [110] or [111] directions. The crack tip response is rationalized in terms of the surface energy (gamma(s)) of the cleavage plane and the unstable stacking energies (gamma(us)) of the slip planes emanating from the crack front.},
739 Address = {TECHNO HOUSE, REDCLIFFE WAY, BRISTOL, ENGLAND BS1 6NX},
740 Author = {Shastry, V and Farkas, D},
741 Date = {SEP 1996},
742 Date-Added = {2012-12-10 16:20:18 +0000},
743 Date-Modified = {2012-12-10 16:20:18 +0000},
744 Journal = {Modelling and Simulation In Materials Science and Engineering},
745 Pages = {473-492},
746 Publisher = {IOP PUBLISHING LTD},
747 Timescited = {31},
748 Title = {Molecular statics simulation of fracture in alpha-iron},
749 Volume = {4},
750 Year = {1996}}
751
752 @article{Shastry:1998dx,
753 Abstract = {The behavior of mode I cracks in CoAl and FeAl is investigated using molecular statics computer simulation methods with embedded atom (EAM) potentials developed by Vailhe and Farkas (not yet published). A double ended crack of finite size embedded in a cylindrical simulation cell and fixed boundary conditions are prescribed along the periphery of the cell, whereas periodic boundary conditions are imposed parallel to the crack front. The displacement field of the finite crack is represented by that of an equivalent pileup of opening dislocations distributed in a manner consistent with the anisotropy of the crystal and traction free conditions of the crack faces. The crack lies on the {110} plane and the crack front is located either along [100], [110] or [111] directions. Cleavage in found to occur in both materials for most crack orientations. In one orientation, cleavage in FeAl is found to occur concurrently with dislocation emission. The crack tip response is rationalized in terms of the surface energy (gamma(s)) of the cleavage plane and the unstable stacking energies (gamma(us)) of the slip planes emanating from the crack front. (C) 1997 Elsevier Science Limited.},
754 Address = {THE BOULEVARD, LANGFORD LANE, KIDLINGTON, OXFORD OX5 1GB, OXON, ENGLAND},
755 Author = {Shastry, V and Farkas, D},
756 Date = {MAR 1998},
757 Date-Added = {2012-12-10 16:20:18 +0000},
758 Date-Modified = {2012-12-10 16:20:18 +0000},
759 Journal = {Intermetallics},
760 Keywords = {aluminides; miscellaneous; iron aluminides based on FeAl; fracture mode; simulations; acoustic},
761 Pages = {95-104},
762 Publisher = {ELSEVIER SCI LTD},
763 Timescited = {3},
764 Title = {Atomistic simulation of fracture in CoAl and FeAl},
765 Volume = {6},
766 Year = {1998}}
767
768 @article{Sankaranarayanan:2005lr,
769 Abstract = {Bimetallic nanoclusters are of interest because of their utility in catalysis and sensors, The thermal characteristics of bimetallic Pt-Pd nanoclusters of different sizes and compositions were investigated through molecular dynamics simulations using quantum Sutton-Chen (QSC) many-body potentials, Monte Carlo simulations employing the bond order simulation model were used to generate minimum energy configurations, which were utilized as the starting point for molecular dynamics simulations. The calculated initial configurations of the Pt-Pd system consisted of surface segregated Pd atoms and a Pt-rich core, Melting characteristics were studied by following the changes in potential energy and heat capacity as functions of temperature, Structural changes accompanying the thermal evolution were studied by the bond order parameter method. The Pt-Pd clusters exhibited a two-stage melting: surface melting of the external Pd atoms followed by homogeneous melting of the Pt core. These transitions were found to depend on the composition and size of the nanocluster. Melting temperatures of the nanoclusters were found to be much lower than those of bulk Pt and Pd. Bulk melting temperatures of Pd and Pt simulated using periodic boundary conditions compare well with experimental values, thus providing justification for the use of QSC potentials in these simulations. Deformation parameters were calculated to characterize the structural evolution resulting from diffusion of Pd and Pt atoms, The results indicate that in Pd-Pt clusters, Pd atoms prefer to remain at the surface even after melting. In addition, Pt also tends to diffuse to the surface after melting due to reduction of its surface energy with temperature. This mixing pattern is different from those reported in some of the earlier Studies on melting of bimetallics.},
770 Author = {Sankaranarayanan, SKRS and Bhethanabotla, VR and Joseph, B},
771 Date-Added = {2012-12-10 16:20:10 +0000},
772 Date-Modified = {2012-12-10 16:20:10 +0000},
773 Doi = {ARTN 195415},
774 Journal = prb,
775 Title = {Molecular dynamics simulation study of the melting of Pd-Pt nanoclusters},
776 Volume = {71},
777 Year = {2005},
778 Bdsk-Url-1 = {http://dx.doi.org/195415}}
779
780 @article{sankaranarayanan:155441,
781 Author = {Subramanian K. R. S. Sankaranarayanan and Venkat R. Bhethanabotla and Babu Joseph},
782 Date-Added = {2012-12-10 16:20:10 +0000},
783 Date-Modified = {2012-12-10 16:20:10 +0000},
784 Eid = {155441},
785 Journal = prb,
786 Keywords = {molecular dynamics method; melting; platinum alloys; palladium alloys; nanowires; surface segregation; specific heat; diffusion; surface structure; solid-state phase transformations; thermal stability; annealing},
787 Local-Url = {file://localhost/Users/charles/Desktop/Papers/PhysRevB_74_155441.pdf},
788 Number = {15},
789 Numpages = {12},
790 Pages = {155441},
791 Publisher = {APS},
792 Title = {Molecular dynamics simulation study of the melting and structural evolution of bimetallic Pd-Pt nanowires},
793 Url = {http://link.aps.org/abstract/PRB/v74/e155441},
794 Volume = {74},
795 Year = {2006},
796 Bdsk-Url-1 = {http://link.aps.org/abstract/PRB/v74/e155441}}
797
798 @article{Belonoshko00,
799 Author = {A.~B. Belonoshko and R. Ahuja and O. Eriksson and B. Johansson},
800 Date-Added = {2012-12-10 16:20:00 +0000},
801 Date-Modified = {2012-12-10 16:20:00 +0000},
802 Journal = prb,
803 Pages = {3838-3844},
804 Title = {Quasi {\it ab initio} Molecular Dynamic Study of $\mbox{Cu}$ Melting},
805 Volume = 61,
806 Year = 2000}
807
808 @article{Medasani:2007uq,
809 Abstract = {We employ first-principles and empirical computational methods to study the surface energy and surface stress of silver nanoparticles. The structures, cohesive energies, and lattice contractions of spherical Ag nanoclusters in the size range 0.5-5.5 nm are analyzed using two different theoretical approaches: an ab initio density functional pseudopotential technique combined with the generalized gradient approximation and the embedded atom method. The surface energies and stresses obtained via the embedded atom method are found to be in good agreement with those predicted by the gradient-corrected ab initio density functional formalism. We estimate the surface energy of Ag nanoclusters to be in the range of 1.0-2.2 J/m(2). Our values are close to the bulk surface energy of silver, but are significantly lower than the recently reported value of 7.2 J/m(2) for free Ag nanoparticles derived from the Kelvin equation.},
810 Author = {Medasani, Bharat and Park, Young Ho and Vasiliev, Igor},
811 Date-Added = {2012-12-10 16:19:51 +0000},
812 Date-Modified = {2012-12-10 16:19:51 +0000},
813 Doi = {ARTN 235436},
814 Journal = prb,
815 Local-Url = {file://localhost/Users/charles/Documents/Papers/PhysRevB_75_235436.pdf},
816 Title = {Theoretical study of the surface energy, stress, and lattice contraction of silver nanoparticles},
817 Volume = {75},
818 Year = {2007},
819 Bdsk-Url-1 = {http://dx.doi.org/235436}}
820
821 @article{Wang:2005qy,
822 Abstract = {The surface structures of cubo-octahedral Pt-Mo nanoparticles have been investigated using the Monte Carlo method and modified embedded atom method potentials that we developed for Pt-Mo alloys. The cubo-octahedral Pt-Mo nanoparticles are constructed with disordered fcc configurations, with sizes from 2.5 to 5.0 nm, and with Pt concentrations from 60 to 90 atom \%. The equilibrium Pt-Mo nanoparticle configurations were generated through Monte Carlo simulations allowing both atomic displacements and element exchanges at 600 K. We predict that the Pt atoms weakly segregate to the surfaces of such nanoparticles. The Pt concentrations in the surface are calculated to be 5-14 atom \% higher than the Pt concentrations of the nanoparticles. Moreover, the Pt atoms preferentially segregate to the facet sites of the surface, while the Pt and Mo atoms tend to alternate along the edges and vertexes of these nanoparticles. We found that decreasing the size or increasing the Pt concentration leads to higher Pt concentrations but fewer Pt-Mo pairs in the Pt-Mo nanoparticle surfaces.},
823 Author = {Wang, GF and Van Hove, MA and Ross, PN and Baskes, MI},
824 Date-Added = {2012-12-10 16:19:42 +0000},
825 Date-Modified = {2012-12-10 16:19:42 +0000},
826 Doi = {DOI 10.1021/jp050116n},
827 Journal = jpcb,
828 Pages = {11683-11692},
829 Title = {Surface structures of cubo-octahedral Pt-Mo catalyst nanoparticles from Monte Carlo simulations},
830 Volume = {109},
831 Year = {2005},
832 Bdsk-Url-1 = {http://dx.doi.org/10.1021/jp050116n}}
833
834 @article{Chui:2003fk,
835 Abstract = {Molecular dynamics simulations of a platinum nanocluster consisting 250 atoms were performed at different temperatures between 70 K and 298 K. The semi-empirical, many-body Sutton-Chen (SC) potential was used to model the interatomic interaction in the metallic system. Regions of core or bulk-like atoms and surface atoms can be defined from analyses of structures, atomic coordination, and the local density function of atoms as defined in the SC potential. The core atoms in the nanoparticle behave as bulk-like metal atoms with a predominant face centered cubic (fcc) packing. The interface between surface atoms and core atoms is marked by a peak in the local density function and corresponds to near surface atoms. The near surface atoms and surface atoms prefer a hexagonal closed packing (hcp). The temperature and size effects on structures of the nanoparticle and the dynamics of the surface region and the core region are discussed.},
836 Author = {Chui, YH and Chan, KY},
837 Date-Added = {2012-12-10 16:19:33 +0000},
838 Date-Modified = {2012-12-10 16:19:33 +0000},
839 Doi = {DOI 10.1039/b302122j},
840 Journal = pccp,
841 Pages = {2869-2874},
842 Title = {Analyses of surface and core atoms in a platinum nanoparticle},
843 Volume = {5},
844 Year = {2003},
845 Bdsk-Url-1 = {http://dx.doi.org/10.1039/b302122j}}
846
847 @article{Thijsse:2002ly,
848 Abstract = {We show that the Stillinger-Weber (SW) potential is a special case of the modified embedded-atom method (MEAM) potential, by deriving the appropriate functional forms and parameter values for the MEAM potential. The electron density and pair potential functions have physically plausible forms. The embedding function is quadratic in the electron density and yields an antibonding contribution under all circumstances. Using these results SW silicon can be conveniently extended to silicon-metal systems within one theoretical framework and one computational scheme. The properties of SW silicon and silicon modeled by the native MEAM representation are compared.},
849 Address = {ONE PHYSICS ELLIPSE, COLLEGE PK, MD 20740-3844 USA},
850 Author = {Thijsse, BJ},
851 Date-Added = {2012-12-10 16:19:26 +0000},
852 Date-Modified = {2012-12-10 16:19:26 +0000},
853 Doi = {DOI 10.1103/PhysRevB.65.195207},
854 Isi = {000175860900066},
855 Isi-Recid = {124946812},
856 Isi-Ref-Recids = {115387317 80388368 102261636 80504184 109297089 57196433 63975437 69996932 73396725 110006580 52728075 53221357 124946813 90546162 124946814 117974311 120374655 120011084 51830448 104460616 55458979 112447170 67400671 65560311 119751303 77356902 109402061},
857 Journal = prb,
858 Month = may,
859 Number = {19},
860 Pages = {195207},
861 Publisher = {AMERICAN PHYSICAL SOC},
862 Times-Cited = {5},
863 Title = {Relationship between the modified embedded-atom method and Stillinger-Weber potentials in calculating the structure of silicon},
864 Volume = {65},
865 Year = {2002},
866 Bdsk-Url-1 = {http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Alerting&SrcApp=Alerting&DestApp=WOS&DestLinkType=FullRecord;KeyUT=000175860900066}}
867
868 @article{Timonova:2011ve,
869 Abstract = {By applying simulated annealing techniques we fit the modified embedded atom method (MEAM) potential to a database of ab initio energies for silicon and construct an improved parametrization of this potential. In addition, we introduce a new, reference-free version of the MEAM potential. This MEAM version is also fitted to the silicon data and shows an even better agreement, although the improvement is modest. Finally, we investigate whether increasing the number of different angular terms in the MEAM potential from 3 to 4 will lead to a better potential. The aim of this work is to determine a broad-ranged potential, one that is reliable in many different low-and high-energy atomic geometries in silicon crystals, molecules, near defects and under strain. To verify this, the performance of the new potentials is tested in different circumstances that were not explicitly included in the fit: relaxed defect energies, thermal expansion, melting temperature and liquid silicon. The new MEAM parametrizations found in this work, called MEAM-M and RF-MEAM, are shown to be overall more accurate than previous potentials-although a few defect energies are exceptions-and we recommend them for future work. The melting temperatures are closer to the experiment than those of other MEAM potentials, but they are still too high.},
870 Address = {DIRAC HOUSE, TEMPLE BACK, BRISTOL BS1 6BE, ENGLAND},
871 Author = {Timonova, Maria and Thijsse, Barend J.},
872 Date-Added = {2012-12-10 16:19:26 +0000},
873 Date-Modified = {2012-12-10 16:19:26 +0000},
874 Doi = {DOI 10.1088/0965-0393/19/1/015003},
875 Isi = {000285379000003},
876 Isi-Recid = {193845106},
877 Isi-Ref-Recids = {103829724 80388368 109297089 80504184 102589117 155514074 62869634 149106644 188936407 158671789 155514076 110736405 132267743 106496752 118427788 155694926 193845107 154569497 117049831 10160688 52733597 81974090 51830448 183685321 175165468 20842010 70690429 77065398 55458979 67400671 142854217 135344867 155514180 188936406 119751303 27109954},
878 Journal = {Modelling and Simulation In Materials Science and Engineering},
879 Month = jan,
880 Number = {1},
881 Pages = {015003},
882 Publisher = {IOP PUBLISHING LTD},
883 Times-Cited = {1},
884 Title = {Optimizing the MEAM potential for silicon},
885 Volume = {19},
886 Year = {2011},
887 Bdsk-Url-1 = {http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Alerting&SrcApp=Alerting&DestApp=WOS&DestLinkType=FullRecord;KeyUT=000285379000003}}
888
889 @article{Beurden:2002ys,
890 Abstract = {An atomistic interaction potential for adsorbate/surface systems is presented, based on the modified embedded-atom method (MEAM) and applied to CO on Pt. All parameters are determined using both density-functional theory (DFT) calculations, as well as the necessary experimental data. Whereas current DFT implementations suffer from problems in predicting the correct adsorption site of CO on Pt{111}, the current MEAM potential quantitatively describes the adsorption energies on the Pt {100} and {111} surfaces. With this potential, one is able to model, amongst others, diffusional properties and the CO induced lifting of the Pt{100}-hex surface reconstruction.},
891 Address = {ONE PHYSICS ELLIPSE, COLLEGE PK, MD 20740-3844 USA},
892 Author = {van Beurden, P and Verhoeven, HGJ and Kramer, GJ and Thijsse, BJ},
893 Date-Added = {2012-12-10 16:18:57 +0000},
894 Date-Modified = {2012-12-10 16:18:57 +0000},
895 Doi = {DOI 10.1103/PhysRevB.66.235409},
896 Isi = {000180279400100},
897 Isi-Recid = {127920116},
898 Isi-Ref-Recids = {100515854 102261636 80504184 86596468 49189551 87313608 118200797 104759623 114816277 43688858 123716000 60942681 32054494 79580399 119900392 112604328 104787214 95253353 85495097 59057119 91236942 69323123 116538925 123233489 110174182 98202194 97300927 104583045 80557185 118566443 106876514 93821961 43505343 72309405 74518216 62074706 51830448 68789690 92569536 88587013 60413345 119665908 112447170 47346043 127920117 121625154 119751303 127920118 119731850 113465338 94816645 98731048 109783982},
899 Journal = prb,
900 Month = dec,
901 Number = {23},
902 Pages = {235409},
903 Publisher = {AMERICAN PHYSICAL SOC},
904 Times-Cited = {12},
905 Title = {Atomistic potential for adsorbate/surface systems: CO on Pt},
906 Volume = {66},
907 Year = {2002},
908 Bdsk-Url-1 = {http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Alerting&SrcApp=Alerting&DestApp=WOS&DestLinkType=FullRecord;KeyUT=000180279400100}}
909
910 @article{Lee:2000vn,
911 Abstract = {The modified embedded-atom method, a first nearest-neighbor semiempirical model fur atomic potentials, can describe the physical properties of a wide range of elements and alloys with various lattice structures. However, the model is not quite successful for bcc metals in that it predicts the order among the size of low index surface energies incorrectly and that it generates a structure more stable than bcc for some bcc metals. In order to remove the problems, the formalism has been extended so that the second nearest neighbor interactions are taken into consideration. New parameters for Fe and comparisons between calculated and experimental physical properties of Fe are presented.},
912 Address = {ONE PHYSICS ELLIPSE, COLLEGE PK, MD 20740-3844 USA},
913 Author = {Lee, BJ and Baskes, MI},
914 Date-Added = {2012-12-10 16:18:48 +0000},
915 Date-Modified = {2012-12-10 16:18:48 +0000},
916 Isi = {000089733800002},
917 Isi-Recid = {117049831},
918 Isi-Ref-Recids = {53850993 80504184 86596468 70382555 109297089 87779199 102261636 64205027 69323074 31030374 57417776 95005783 72248812 51830448 9008933 31314512},
919 Journal = prb,
920 Month = oct,
921 Number = {13},
922 Pages = {8564--8567},
923 Publisher = {AMERICAN PHYSICAL SOC},
924 Times-Cited = {105},
925 Title = {Second nearest-neighbor modified embedded-atom-method potential},
926 Volume = {62},
927 Year = {2000},
928 Bdsk-Url-1 = {http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Alerting&SrcApp=Alerting&DestApp=WOS&DestLinkType=FullRecord;KeyUT=000089733800002}}
929
930 @article{Lee:2001qf,
931 Abstract = {{The second nearest-neighbor modified embedded atom method (MEAM)
932 {[}Phys. Rev. B 62, 8564 (2000)], developed in order to solve problems
933 of the original first nearest-neighbor MEAM on bcc metals, has now been
934 applied to all bcc transition metals, Fe, Cr, Mo, W, V, Nb, and Ta. The
935 potential parameters could be determined empirically by fitting to
936 (partial derivativeB/partial derivativeP), elastic constants, structural
937 energy differences among bcc, fcc and hcp structures, vacancy-formation
938 energy, and surface energy. Various physical properties of individual
939 elements, including elastic constants, structural properties,
940 point-defect properties, surface properties, and thermal properties were
941 calculated and compared with experiments or high level calculations so
942 that the reliability of the present empirical atomic-potential formalism
943 can be evaluated, It is shown that the present potentials reasonably
944 reproduce nonfitted properties of the bcc transition metals, as well as
945 the fitted properties. The effect of the size of radial cutoff distance
946 on the calculation and the compatibility with the original first
947 nearest-neighbor MEAM that has been successful for fcc, hcp, and other
948 structures are also discussed.}},
949 Address = {{ONE PHYSICS ELLIPSE, COLLEGE PK, MD 20740-3844 USA}},
950 Affiliation = {{Lee, BJ (Reprint Author), Korea Res Inst Stand \& Sci, Mat Evaluat Ctr, Yusong POB 102, Taejon 305600, South Korea. Korea Res Inst Stand \& Sci, Mat Evaluat Ctr, Taejon 305600, South Korea. Los Alamos Natl Lab, Struct Properties Relat Grp, Los Alamos, NM 87545 USA.}},
951 Article-Number = {{184102}},
952 Author = {Lee, BJ and Baskes, MI and Kim, H and Cho, YK},
953 Author-Email = {{bjlee@kriss.re.kr baskes@lanl.gov}},
954 Date-Added = {2012-12-10 16:18:48 +0000},
955 Date-Modified = {2012-12-10 16:18:48 +0000},
956 Doc-Delivery-Number = {{493TK}},
957 Doi = {{10.1103/PhysRevB.64.184102}},
958 Issn = {{0163-1829}},
959 Journal = prb,
960 Journal-Iso = {prb},
961 Keywords-Plus = {{ENERGY-ELECTRON-DIFFRACTION; SURFACE FREE-ENERGIES; MULTILAYER-RELAXATION; W(001) SURFACE; SILICON; RECONSTRUCTION; ELEMENTS; LEED; PSEUDOPOTENTIALS; W(110)}},
962 Language = {{English}},
963 Month = {{NOV 1}},
964 Number = {{18}},
965 Number-Of-Cited-References = {{46}},
966 Publisher = {{AMERICAN PHYSICAL SOC}},
967 Subject-Category = {{Physics}},
968 Times-Cited = {{136}},
969 Title = {{Second nearest-neighbor modified embedded atom method potentials for bcc transition metals}},
970 Type = {{Article}},
971 Unique-Id = {{ISI:000172239400030}},
972 Volume = {{64}},
973 Year = {{2001}},
974 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.64.184102%7D}}
975
976 @article{BASKES:1994fk,
977 Abstract = {The modified embedded atom method (MEAM) is an empirical extension of embedded atom method (EAM) that includes angular forces. The MEAM, which has previously been applied to the atoms in the FCC, BCC, and diamond cubic crystal systems, has been extended to the HCP crystal structure. Parameters have been determined for HCP metals that have c/a ratios less than ideal. The model is fitted to the lattice constants, elastic constants, cohesive energy, vacancy formation energy, and the BCC-HCP structural energy difference of these metals and is able to reproduce this extensive data base quite well. Structural energies and lattice constants of the HCP metals in a number of cubic structures are predicted. The divacancy is found to be unbound in all of the metals considered except for Be. Stacking fault and surface energies are found to be in reasonable agreement with experiment.},
978 Address = {TECHNO HOUSE, REDCLIFFE WAY, BRISTOL, ENGLAND BS1 6NX},
979 Author = {BASKES, MI and JOHNSON, RA},
980 Date-Added = {2012-12-10 16:18:35 +0000},
981 Date-Modified = {2012-12-10 16:18:35 +0000},
982 Isi = {A1994MZ57500011},
983 Isi-Recid = {86596468},
984 Isi-Ref-Recids = {67692914 13168554 70382555 80504184 64205027 52159305 52728075 48773580 73073438 49217991 75551275 85822177 8067494 50263912 51662888 71235089 18200957 51830448 67853369 54796423 31314512},
985 Journal = {Modelling and Simulation In Materials Science and Engineering},
986 Month = jan,
987 Number = {1},
988 Pages = {147--163},
989 Publisher = {IOP PUBLISHING LTD},
990 Times-Cited = {169},
991 Title = {MODIFIED EMBEDDED-ATOM POTENTIALS FOR HCP METALS},
992 Volume = {2},
993 Year = {1994},
994 Bdsk-Url-1 = {http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Alerting&SrcApp=Alerting&DestApp=WOS&DestLinkType=FullRecord;KeyUT=A1994MZ57500011}}
995
996 @article{Ercolessi88,
997 Author = {F. Ercolessi and M. Parrinello and E. Tosatti},
998 Date-Added = {2012-12-10 16:18:27 +0000},
999 Date-Modified = {2012-12-10 16:18:27 +0000},
1000 Journal = {Philosophical Magazine a},
1001 Pages = {213-226},
1002 Title = {Simulation of Gold in the Glue Model},
1003 Volume = 58,
1004 Year = 1988}
1005
1006 @article{Qi99,
1007 Author = {Y. Qi and T. Cagin and Y. Kimura and W.~A. {Goddard III}},
1008 Date-Added = {2012-12-10 16:18:13 +0000},
1009 Date-Modified = {2012-12-10 16:18:13 +0000},
1010 Journal = prb,
1011 Number = 5,
1012 Pages = {3527-3533},
1013 Title = {Molecular-Dynamics Simulations of Glass Formation and Crystallization in Binary Liquid Metals: $\mbox{Cu-Ag}$ and $\mbox{Cu-Ni}$},
1014 Volume = 59,
1015 Year = 1999}
1016
1017 @unpublished{QSC,
1018 Author = {Y. Kimura and T. Cagin and W. A. {Goddard III}},
1019 Date-Added = {2012-12-10 16:18:07 +0000},
1020 Date-Modified = {2012-12-10 16:18:07 +0000},
1021 Note = {Downloaded from: $\mathtt{http://wag.caltech.edu/home-pages/tahir/psfiles/51.ps}$},
1022 Title = {The Quantum Sutton-Chen Many Body Potential for Properties of FCC metals},
1023 Url = {http://wag.caltech.edu/home-pages/tahir/psfiles/51.ps},
1024 Year = {1998},
1025 Bdsk-Url-1 = {citeseer.ist.psu.edu/150963.html}}
1026
1027 @article{Chen90,
1028 Author = {A.~P. Sutton and J. Chen},
1029 Date-Added = {2012-12-10 16:17:59 +0000},
1030 Date-Modified = {2012-12-10 16:17:59 +0000},
1031 Journal = {Phil. Mag. Lett.},
1032 Pages = {139-146},
1033 Title = {Long-Range Finnis Sinclair Potentials},
1034 Volume = 61,
1035 Year = 1990}
1036
1037 @article{Finnis84,
1038 Author = {M.~W Finnis and J.~E. Sinclair},
1039 Date-Added = {2012-12-10 16:17:59 +0000},
1040 Date-Modified = {2012-12-10 16:17:59 +0000},
1041 Journal = {Phil. Mag. A},
1042 Pages = {45-55},
1043 Title = {A Simple Empirical N-Body Potential for Transition-Metals},
1044 Volume = 50,
1045 Year = 1984}
1046
1047 @article{Alemany98,
1048 Author = {M.~M.~G. Alemany and C. Rey and L.~J. Gallego},
1049 Date-Added = {2012-12-10 16:17:52 +0000},
1050 Date-Modified = {2012-12-10 16:17:52 +0000},
1051 Journal = jcp,
1052 Pages = {5175-5176},
1053 Title = {Transport Coefficients of Liquid Transition Metals: A Computer Simulation Study Using the Embedded Atom Model},
1054 Volume = 109,
1055 Year = 1998}
1056
1057 @article{Lu97,
1058 Author = {J. Lu and J.~A. Szpunar},
1059 Date-Added = {2012-12-10 16:17:42 +0000},
1060 Date-Modified = {2012-12-10 16:17:42 +0000},
1061 Journal = {Phil. Mag. A},
1062 Pages = {1057-1066},
1063 Title = {Applications of the Embedded-Atom Method to Glass Formation and Crystallization of Liquid and Glass Transition-Metal Nickel},
1064 Volume = {75},
1065 Year = {1997}}
1066
1067 @article{Voter95a,
1068 Author = {A.~F. Voter},
1069 Date-Added = {2012-12-10 16:17:28 +0000},
1070 Date-Modified = {2012-12-10 16:17:28 +0000},
1071 Journal = {Intermetallic Compounds: Principles and Practice},
1072 Pages = {77},
1073 Title = {The Embedded-Atom Method},
1074 Volume = {1},
1075 Year = {1995}}
1076
1077 @article{Plimpton93,
1078 Author = {S.~J. Plimpton and B.~A. Hendrickson},
1079 Date-Added = {2012-12-10 16:17:18 +0000},
1080 Date-Modified = {2012-12-10 16:17:18 +0000},
1081 Journal = {Mrs Proceedings},
1082 Pages = 37,
1083 Title = {Parallel Molecular Dynamics With the Embedded Atom Method},
1084 Volume = 291,
1085 Year = 1993}
1086
1087 @article{Daw89,
1088 Author = {Murray~S. Daw},
1089 Date-Added = {2012-12-10 16:17:07 +0000},
1090 Date-Modified = {2012-12-10 16:17:07 +0000},
1091 Journal = prb,
1092 Pages = {7441-7452},
1093 Title = {Model of Metallic Cohesion: The Embedded-Atom Method},
1094 Volume = 39,
1095 Year = 1989}
1096
1097 @article{Johnson89,
1098 Author = {R.~A. Johnson},
1099 Date-Added = {2012-12-10 16:16:57 +0000},
1100 Date-Modified = {2012-12-10 16:16:57 +0000},
1101 Journal = prb,
1102 Number = 17,
1103 Pages = 12554,
1104 Title = {Alloy Models With the Embedded-Atom Method},
1105 Volume = 39,
1106 Year = 1989}
1107
1108 @article{Daw84,
1109 Author = {M.~S. Daw and M.~I. Baskes},
1110 Date-Added = {2012-12-10 16:16:51 +0000},
1111 Date-Modified = {2012-12-10 16:16:51 +0000},
1112 Journal = prb,
1113 Number = 12,
1114 Pages = {6443-6453},
1115 Title = {Embedded-Atom Method: Derivation and Application to Impurities, Surfaces, And Other Defects in Metals},
1116 Volume = 29,
1117 Year = 1984}
1118
1119 @article{Foiles86,
1120 Author = {S.~M. Foiles and M.~I. Baskes and M.~S. Daw},
1121 Date-Added = {2012-12-10 16:16:51 +0000},
1122 Date-Modified = {2012-12-10 16:16:51 +0000},
1123 Journal = prb,
1124 Number = 12,
1125 Pages = 7983,
1126 Title = {Embedded-Atom-Method Functions for the Fcc Metals $\mbox{Cu, Ag, Au, Ni, Pd, Pt}$, And Their Alloys},
1127 Volume = 33,
1128 Year = 1986}
1129
1130 @article{CAR:1985bh,
1131 Address = {COLLEGE PK},
1132 Af = {CAR, R PARRINELLO, M},
1133 Author = {Car, R. And Parrinello, M.},
1134 Author-Address = {UNIV TRIESTE, DIPARTIMENTO FIS TEOR, I-34127 TRIESTE, ITALY.},
1135 Cited-Reference-Count = {12},
1136 Date-Added = {2012-12-10 16:16:34 +0000},
1137 Date-Modified = {2012-12-10 16:16:34 +0000},
1138 Document-Type = {Article},
1139 Doi = {10.1103/PhysRevLett.55.2471},
1140 Isi = {WOS:A1985AUN4900027},
1141 Isi-Document-Delivery-Number = {AUN49},
1142 Iso-Source-Abbreviation = {Phys. Rev. Lett.},
1143 Issn = {0031-9007},
1144 Journal = prl,
1145 Language = {English},
1146 Number = {22},
1147 Page-Count = {4},
1148 Pages = {2471--2474},
1149 Publication-Type = {J},
1150 Publisher = {AMER PHYSICAL SOC},
1151 Publisher-Address = {ONE PHYSICS ELLIPSE, COLLEGE PK, MD 20740-3844 USA},
1152 Reprint-Address = {CAR, R (reprint author), INT SCH ADV STUDIES SISSA, TRIESTE, ITALY.},
1153 Source = {PHYS REV LETT},
1154 Subject-Category = {Physics},
1155 Times-Cited = {5980},
1156 Title = {Unified Approach For Molecular-Dynamics And Density-Functional Theory},
1157 Volume = {55},
1158 Wc = {Physics, Multidisciplinary},
1159 Year = {1985},
1160 Z9 = {6024},
1161 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevLett.55.2471}}
1162
1163 @article{Guidelli:2000fy,
1164 Abstract = {After a bird's eye view of double-layer models of interfaces between metals and aqueous solutions from their very beginning, recent developments are reviewed. The rule of the metal is examined by considering calculations ibr metal clusters and the jellium model, both in vacuo and in contact with model solutions. Integral equation approaches to the solution side of the interfaces are reviewed and compared with Monte Carlo and molecular dynamics simulations of analogous molecular models. Computer simulations of metal-water interfaces (including Car-Parinello simulations) and of ionic solution metal interfaces are considered. Finally, a field-theoretical approach to the double-layer and the treatment of rough electrodes are briefly reviewed. (C) 2000 Elsevier Science Ltd. All rights reserved.},
1165 Author = {Guidelli, R. and Schmickler, W.},
1166 Date = {2000},
1167 Date-Added = {2012-12-10 16:16:34 +0000},
1168 Date-Modified = {2012-12-10 16:16:34 +0000},
1169 Doi = {10.1016/S0013-4686(00)00335-2},
1170 Isi = {WOS:000087352000009},
1171 Issn = {0013-4686},
1172 Journal = ea,
1173 Number = {15-16},
1174 Pages = {2317--2338},
1175 Publication-Type = {J},
1176 Times-Cited = {47},
1177 Title = {Recent developments in models for the inter-face between a metal and an aqueous solution},
1178 Volume = {45},
1179 Year = {2000},
1180 Z8 = {0},
1181 Z9 = {47},
1182 Zb = {2},
1183 Bdsk-Url-1 = {http://dx.doi.org/10.1016/S0013-4686(00)00335-2}}
1184
1185 @article{Izvekov:2000fv,
1186 Abstract = {An effective and computationally economical scheme, which unifies density functional description of a metal electronic structure and the classical molecular dynamics description of an electrolyte in contact with the metal, is described. The density functional part of the scheme comprises Car-Parinello and related formalisms. This scheme allows the extension to longer time scale of the simulation of metal-electrolyte interface while keeping fairly good accuracy in the prediction of the metal electronic structure. The numerical scheme is implemented in the relatively simple model of a metal cluster surrounded by an electrolyte. The elementary event of an atom leaving a metal surface as an ion stabilized by solvent molecules has been studied. In particular the potential of mean force of the ion as it dissolves was evaluated. The evolution of the solvation shell of the ion as it leaves the surface is calculated as a further example. (C) 2000 The Electrochemical Society. S0013-4651(00)01-066-1. All rights reserved.},
1187 Author = {Izvekov, S. and Philpott, M. R. and Eglitis, R. I.},
1188 Date = {JUN 2000},
1189 Date-Added = {2012-12-10 16:16:34 +0000},
1190 Date-Modified = {2012-12-10 16:16:34 +0000},
1191 Doi = {10.1149/1.1393520},
1192 Isi = {WOS:000087561800044},
1193 Issn = {0013-4651},
1194 Journal = {J. Electrochem. Soc.},
1195 Month = {Jun},
1196 Number = {6},
1197 Pages = {2273--2278},
1198 Publication-Type = {J},
1199 Times-Cited = {1},
1200 Title = {Ab initio simulation of metal cluster surrounded by electrolyte},
1201 Volume = {147},
1202 Year = {2000},
1203 Z8 = {0},
1204 Z9 = {1},
1205 Zb = {0},
1206 Bdsk-Url-1 = {http://dx.doi.org/10.1149/1.1393520}}
1207
1208 @article{KRESSE:1993qf,
1209 Abstract = {We show that quantum-mechanical molecular-dynamics simulations in a finite-temperature local-density approximation based on the calculation of the electronic ground state and of the Hellmann-Feynman forces after each time step are feasible for liquid noble and transition metals. This is possible with the use of Vanderbilt-type ''ultrasoft'' pseudopotentials and efficient conjugate-gradient techniques for the determination of the electronic ground state. Results for liquid copper and vanadium are presented.},
1210 Author = {Kresse, G. And Hafner, J.},
1211 Date = {NOV 1 1993},
1212 Date-Added = {2012-12-10 16:16:18 +0000},
1213 Date-Modified = {2012-12-10 16:16:18 +0000},
1214 Doi = {10.1103/PhysRevB.48.13115},
1215 Isi = {WOS:A1993MF90100084},
1216 Issn = {0163-1829},
1217 Journal = prb,
1218 Month = {Nov},
1219 Number = {17},
1220 Pages = {13115--13118},
1221 Publication-Type = {J},
1222 Times-Cited = {1535},
1223 Title = {Ab initio Molecular-Dynamics For Open-Shell Transition-Metals},
1224 Volume = {48},
1225 Year = {1993},
1226 Z8 = {27},
1227 Z9 = {1550},
1228 Zb = {13},
1229 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.48.13115}}
1230
1231 @article{KRESSE:1993ve,
1232 Abstract = {We present ab initio quantum-mechanical molecular-dynamics calculations based on the calculation of the electronic ground state and of the Hellmann-Feynman forces in the local-density approximation at each molecular-dynamics step. This is possible using conjugate-gradient techniques for energy minimization, and predicting the wave functions for new ionic positions using sub-space alignment. This approach avoids the instabilities inherent in quantum-mechanical molecular-dynamics calculations for metals based on the use of a fictitious Newtonian dynamics for the electronic degrees of freedom. This method gives perfect control of the adiabaticity and allows us to perform simulations over several picoseconds.},
1233 Author = {Kresse, G. And Hafner, J.},
1234 Date = {JAN 1 1993},
1235 Date-Added = {2012-12-10 16:16:18 +0000},
1236 Date-Modified = {2012-12-10 16:16:18 +0000},
1237 Doi = {10.1103/PhysRevB.47.558},
1238 Isi = {WOS:A1993KH03700082},
1239 Issn = {0163-1829},
1240 Journal = prb,
1241 Month = {Jan},
1242 Number = {1},
1243 Pages = {558--561},
1244 Publication-Type = {J},
1245 Times-Cited = {6464},
1246 Title = {Ab initio Molecular-Dynamics For Liquid-Metals},
1247 Volume = {47},
1248 Year = {1993},
1249 Z8 = {130},
1250 Z9 = {6527},
1251 Zb = {54},
1252 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.47.558}}
1253
1254 @article{KRESSE:1994ul,
1255 Abstract = {We present ab initio quantum-mechanical molecular-dynamics simulations of the liquid-metal-amorphous-semiconductor transition in Ge. Our simulations are based on (a) finite-temperature density-functional theory of the one-electron states, (b) exact energy minimization and hence calculation of the exact Hellmann-Feynman forces after each molecular-dynamics step using preconditioned conjugate-gradient techniques, (c) accurate nonlocal pseudopotentials, and (d) Nose dynamics for generating a canonical ensemble. This method gives perfect control of the adiabaticity of the electron-ion ensemble and allows us to perform simulations over more than 30 ps. The computer-generated ensemble describes the structural, dynamic, and electronic properties of liquid and amorphous Ge in very good agreement with experiment. The simulation allows us to study in detail the changes in the structure-property relationship through the metal-semiconductor transition. We report a detailed analysis of the local structural properties and their changes induced by an annealing process. The geometrical, bonding, and spectral properties of defects in the disordered tetrahedral network are investigated and compared with experiment.},
1256 Author = {Kresse, G. And Hafner, J.},
1257 Date = {MAY 15 1994},
1258 Date-Added = {2012-12-10 16:16:18 +0000},
1259 Date-Modified = {2012-12-10 16:16:18 +0000},
1260 Doi = {10.1103/PhysRevB.49.14251},
1261 Isi = {WOS:A1994NR42300018},
1262 Issn = {0163-1829},
1263 Journal = prb,
1264 Month = {May},
1265 Number = {20},
1266 Pages = {14251--14269},
1267 Publication-Type = {J},
1268 Times-Cited = {3878},
1269 Title = {Ab-Initio Molecular-Dynamics Simulation Of The Liquid-Metal Amorphous-Semiconductor Transition In Germanium},
1270 Volume = {49},
1271 Year = {1994},
1272 Z8 = {58},
1273 Z9 = {3909},
1274 Zb = {17},
1275 Bdsk-File-1 = {YnBsaXN0MDDUAQIDBAUGJCVYJHZlcnNpb25YJG9iamVjdHNZJGFyY2hpdmVyVCR0b3ASAAGGoKgHCBMUFRYaIVUkbnVsbNMJCgsMDxJXTlMua2V5c1pOUy5vYmplY3RzViRjbGFzc6INDoACgAOiEBGABIAFgAdccmVsYXRpdmVQYXRoWWFsaWFzRGF0YV8QGC4uLy4uLy4uLy5UcmFzaC9jaXRhdGlvbtIXCxgZV05TLmRhdGFPEQFUAAAAAAFUAAIAAAhQcnVkZW5jZQAAAAAAAAAAAAAAAAAAAAAAAADKDk2BSCsAAAEHkNAIY2l0YXRpb24AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAqJxVczv678AAAAAAAAAAAADAAIAAAkgAAAAAAAAAAAAAAAAAAAABi5UcmFzaAAQAAgAAMoOhcEAAAARAAgAAMzwMg8AAAABAAwBB5DQAAagmAAAkkUAAgAqUHJ1ZGVuY2U6VXNlcnM6AGptaWNoYWxrOgAuVHJhc2g6AGNpdGF0aW9uAA4AEgAIAGMAaQB0AGEAdABpAG8AbgAPABIACABQAHIAdQBkAGUAbgBjAGUAEgAeVXNlcnMvam1pY2hhbGsvLlRyYXNoL2NpdGF0aW9uABMAAS8AABUAAgAP//8AAIAG0hscHR5aJGNsYXNzbmFtZVgkY2xhc3Nlc11OU011dGFibGVEYXRhox0fIFZOU0RhdGFYTlNPYmplY3TSGxwiI1xOU0RpY3Rpb25hcnmiIiBfEA9OU0tleWVkQXJjaGl2ZXLRJidUcm9vdIABAAgAEQAaACMALQAyADcAQABGAE0AVQBgAGcAagBsAG4AcQBzAHUAdwCEAI4AqQCuALYCDgIQAhUCIAIpAjcCOwJCAksCUAJdAmACcgJ1AnoAAAAAAAACAQAAAAAAAAAoAAAAAAAAAAAAAAAAAAACfA==},
1276 Bdsk-Url-1 = {http://dx.doi.org/10.1103/PhysRevB.49.14251}}
1277
1278 @article{doi:10.1126/science.1182122,
1279 Abstract = {Stepped single-crystal surfaces are viewed as models of real catalysts, which consist of small metal particles exposing a large number of low-coordination sites. We found that stepped platinum (Pt) surfaces can undergo extensive and reversible restructuring when exposed to carbon monoxide (CO) at pressures above 0.1 torr. Scanning tunneling microscopy and photoelectron spectroscopy studies under gaseous environments near ambient pressure at room temperature revealed that as the CO surface coverage approaches 100%, the originally flat terraces of (557) and (332) oriented Pt crystals break up into nanometer-sized clusters and revert to the initial morphology after pumping out the CO gas. Density functional theory calculations provide a rationale for the observations whereby the creation of increased concentrations of low-coordination Pt edge sites in the formed nanoclusters relieves the strong CO-CO repulsion in the highly compressed adsorbate film. This restructuring phenomenon has important implications for heterogeneous catalytic reactions.},
1280 Author = {Tao, Feng and Dag, Sefa and Wang, Lin-Wang and Liu, Zhi and Butcher, Derek R. and Bluhm, Hendrik and Salmeron, Miquel and Somorjai, Gabor A.},
1281 Date-Added = {2012-10-02 20:18:51 +0000},
1282 Date-Modified = {2012-10-04 21:56:41 +0000},
1283 Doi = {10.1126/science.1182122},
1284 Eprint = {http://www.sciencemag.org/content/327/5967/850.full.pdf},
1285 Journal = {Science},
1286 Number = {5967},
1287 Pages = {850-853},
1288 Rating = {5},
1289 Read = {1},
1290 Title = {Break-Up of Stepped Platinum Catalyst Surfaces by High CO Coverage},
1291 Url = {http://www.sciencemag.org/content/327/5967/850.abstract},
1292 Volume = {327},
1293 Year = {2010},
1294 Bdsk-Url-1 = {http://www.sciencemag.org/content/327/5967/850.abstract},
1295 Bdsk-Url-2 = {http://dx.doi.org/10.1126/science.1182122}}
1296
1297 @article{0953-8984-16-8-001,
1298 Abstract = {We have studied the trends in CO adsorption on close-packed metal surfaces: Co, Ni, Cu from the 3d row, Ru, Rh, Pd, Ag from the 4d row and Ir, Pt, Au from the 5d row using density functional theory. In particular, we were concerned with the trends in adsorption energy, geometry, vibrational properties and other parameters derived from the electronic structure of the substrate. The influence of specific changes in our set-up, such as choice of the exchange correlation functional, the choice of pseudopotential, size of the basis set and substrate relaxation, has been carefully evaluated. We found that, while the geometrical and vibrational properties of the adsorbate--substrate complex are calculated with high accuracy, the adsorption energies calculated with the gradient-corrected Perdew--Wang exchange--correlation energies are overestimated. In addition, the calculations tend to favour adsorption sites with higher coordination, resulting in the prediction of the wrong adsorption sites for the Rh, Pt and Cu surfaces (hollow instead of top). The revised Perdew--Burke--Erzernhof functional (RPBE) leads to lower (i.e. more realistic) adsorption energies for transition metals, but to the wrong results for noble metals---for Ag and Au, endothermic adsorption is predicted. The site preference remains the same. We discuss trends in relation to the electronic structure of the substrate across the periodic table, summarizing the state-of-the-art of CO adsorption on close-packed metal surfaces.},
1299 Author = {Marek Gajdo{\v s} and Andreas Eichler and J{\"u}rgen Hafner},
1300 Date-Added = {2012-09-17 20:05:54 +0000},
1301 Date-Modified = {2012-09-17 20:05:54 +0000},
1302 Journal = {Journal of Physics: Condensed Matter},
1303 Number = {8},
1304 Pages = {1141},
1305 Title = {CO adsorption on close-packed transition and noble metal surfaces: trends from ab initio calculations},
1306 Url = {http://stacks.iop.org/0953-8984/16/i=8/a=001},
1307 Volume = {16},
1308 Year = {2004},
1309 Bdsk-Url-1 = {http://stacks.iop.org/0953-8984/16/i=8/a=001}}
1310
1311 @article{PhysRevB.39.7441,
1312 Author = {Daw, Murray S.},
1313 Date-Added = {2012-09-17 20:02:31 +0000},
1314 Date-Modified = {2012-09-17 20:02:31 +0000},
1315 Doi = {10.1103/PhysRevB.39.7441},
1316 Issue = {11},
1317 Journal = {Phys. Rev. B},
1318 Month = {Apr},
1319 Pages = {7441--7452},
1320 Publisher = {American Physical Society},
1321 Title = {Model of metallic cohesion: The embedded-atom method},
1322 Url = {http://link.aps.org/doi/10.1103/PhysRevB.39.7441},
1323 Volume = {39},
1324 Year = {1989},
1325 Bdsk-File-1 = {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},
1326 Bdsk-Url-1 = {http://link.aps.org/doi/10.1103/PhysRevB.39.7441},
1327 Bdsk-Url-2 = {http://dx.doi.org/10.1103/PhysRevB.39.7441}}
1328
1329 @article{EAM,
1330 Author = {Foiles, S. M. and Baskes, M. I. and Daw, M. S.},
1331 Date-Added = {2012-09-17 19:47:39 +0000},
1332 Date-Modified = {2012-09-17 19:49:04 +0000},
1333 Journal = {Phys. Rev. B},
1334 Keywords = {EAM},
1335 Month = {June},
1336 Number = {12},
1337 Pages = {7983-7991},
1338 Title = {Embedded-atom-method functions for the fcc metals Cu, Ag, Au, Ni, Pd, Pt, and their alloys},
1339 Volume = {33},
1340 Year = {1986},
1341 Bdsk-File-1 = {YnBsaXN0MDDUAQIDBAUGJCVYJHZlcnNpb25YJG9iamVjdHNZJGFyY2hpdmVyVCR0b3ASAAGGoKgHCBMUFRYaIVUkbnVsbNMJCgsMDxJXTlMua2V5c1pOUy5vYmplY3RzViRjbGFzc6INDoACgAOiEBGABIAFgAdccmVsYXRpdmVQYXRoWWFsaWFzRGF0YV8QPy4uLy4uLy4uL0Ryb3Bib3gvR1JPVVAvRUFNL0VBTV9GQ0NfbWV0YWxzX0ZvaWxlc19CYXNrZXNfRGF3LnBkZtIXCxgZV05TLmRhdGFPEQHeAAAAAAHeAAIAAAhQcnVkZW5jZQAAAAAAAAAAAAAAAAAAAAAAAADKDk2BSCsAAAH4L5sfRUFNX0ZDQ19tZXRhbHNfRm9pbCMyN0M3NDhDLnBkZgAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAnx0jMoOuyQAAAAAAAAAAAADAAQAAAkgAAAAAAAAAAAAAAAAAAAAA0VBTQAAEAAIAADKDoXBAAAAEQAIAADKDvNkAAAAAQAUAfgvmwAG4AYABt+oAAagmAAAkkUAAgBOUHJ1ZGVuY2U6VXNlcnM6AGptaWNoYWxrOgBEcm9wYm94OgBHUk9VUDoARUFNOgBFQU1fRkNDX21ldGFsc19Gb2lsIzI3Qzc0OEMucGRmAA4ASgAkAEUAQQBNAF8ARgBDAEMAXwBtAGUAdABhAGwAcwBfAEYAbwBpAGwAZQBzAF8AQgBhAHMAawBlAHMAXwBEAGEAdwAuAHAAZABmAA8AEgAIAFAAcgB1AGQAZQBuAGMAZQASAEVVc2Vycy9qbWljaGFsay9Ecm9wYm94L0dST1VQL0VBTS9FQU1fRkNDX21ldGFsc19Gb2lsZXNfQmFza2VzX0Rhdy5wZGYAABMAAS8AABUAAgAP//8AAIAG0hscHR5aJGNsYXNzbmFtZVgkY2xhc3Nlc11OU011dGFibGVEYXRhox0fIFZOU0RhdGFYTlNPYmplY3TSGxwiI1xOU0RpY3Rpb25hcnmiIiBfEA9OU0tleWVkQXJjaGl2ZXLRJidUcm9vdIABAAgAEQAaACMALQAyADcAQABGAE0AVQBgAGcAagBsAG4AcQBzAHUAdwCEAI4A0ADVAN0CvwLBAsYC0QLaAugC7ALzAvwDAQMOAxEDIwMmAysAAAAAAAACAQAAAAAAAAAoAAAAAAAAAAAAAAAAAAADLQ==}}
1342
1343 @article{doi:10.1021/jp0665729,
1344 Author = {Yim, Wai-Leung and Nowitzki, Tobias and Necke, Mandus and Schnars, Hanno and Nickut, Patricia and Biener, J{\"u}rgen and Biener, Monika M. and Zielasek, Volkmar and Al-Shamery, Katharina and Kl{\"u}ner, Thorsten and B{\"a}umer, Marcus},
1345 Date-Added = {2012-09-06 21:14:21 +0000},
1346 Date-Modified = {2012-09-06 21:14:21 +0000},
1347 Doi = {10.1021/jp0665729},
1348 Eprint = {http://pubs.acs.org/doi/pdf/10.1021/jp0665729},
1349 Journal = {The Journal of Physical Chemistry C},
1350 Number = {1},
1351 Pages = {445-451},
1352 Title = {Universal Phenomena of CO Adsorption on Gold Surfaces with Low-Coordinated Sites},
1353 Url = {http://pubs.acs.org/doi/abs/10.1021/jp0665729},
1354 Volume = {111},
1355 Year = {2007},
1356 Bdsk-Url-1 = {http://pubs.acs.org/doi/abs/10.1021/jp0665729},
1357 Bdsk-Url-2 = {http://dx.doi.org/10.1021/jp0665729}}
1358
1359 @article{Straub,
1360 Author = {John E. Straub and Martin Karplus},
1361 Date-Added = {2012-08-30 21:54:17 +0000},
1362 Date-Modified = {2012-08-30 21:54:59 +0000},
1363 Journal = {Chemical Physics},
1364 Keywords = {CO and model},
1365 Month = {June},
1366 Pages = {221-248},
1367 Title = {Molecular Dynamics Study of the Photodissociation of Carbon Monoxide from Myoglobin: Ligand Dynamics in the first 10 ps},
1368 Volume = {158},
1369 Year = {1991},
1370 Bdsk-File-1 = {YnBsaXN0MDDUAQIDBAUGJCVYJHZlcnNpb25YJG9iamVjdHNZJGFyY2hpdmVyVCR0b3ASAAGGoKgHCBMUFRYaIVUkbnVsbNMJCgsMDxJXTlMua2V5c1pOUy5vYmplY3RzViRjbGFzc6INDoACgAOiEBGABIAFgAdccmVsYXRpdmVQYXRoWWFsaWFzRGF0YV8QPy4uLy4uLy4uL0Ryb3Bib3gvR1JPVVAvUGxhdGludW1DTy9DT19QYXJhbWV0ZXJzXzNfc2l0ZU1vZGVsLnBkZtIXCxgZV05TLmRhdGFPEQHcAAAAAAHcAAIAAAhQcnVkZW5jZQAAAAAAAAAAAAAAAAAAAAAAAADKDk2BSCsAAAE3SWcdQ09fUGFyYW1ldGVyc18zX3NpdGVNb2RlbC5wZGYAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAbHqvcujHsEAAAAAAAAAAAADAAQAAAkgAAAAAAAAAAAAAAAAAAAAClBsYXRpbnVtQ08AEAAIAADKDoXBAAAAEQAIAADLo1cBAAAAAQAUATdJZwAG4AYABt+oAAagmAAAkkUAAgBTUHJ1ZGVuY2U6VXNlcnM6AGptaWNoYWxrOgBEcm9wYm94OgBHUk9VUDoAUGxhdGludW1DTzoAQ09fUGFyYW1ldGVyc18zX3NpdGVNb2RlbC5wZGYAAA4APAAdAEMATwBfAFAAYQByAGEAbQBlAHQAZQByAHMAXwAzAF8AcwBpAHQAZQBNAG8AZABlAGwALgBwAGQAZgAPABIACABQAHIAdQBkAGUAbgBjAGUAEgBFVXNlcnMvam1pY2hhbGsvRHJvcGJveC9HUk9VUC9QbGF0aW51bUNPL0NPX1BhcmFtZXRlcnNfM19zaXRlTW9kZWwucGRmAAATAAEvAAAVAAIAD///AACABtIbHB0eWiRjbGFzc25hbWVYJGNsYXNzZXNdTlNNdXRhYmxlRGF0YaMdHyBWTlNEYXRhWE5TT2JqZWN00hscIiNcTlNEaWN0aW9uYXJ5oiIgXxAPTlNLZXllZEFyY2hpdmVy0SYnVHJvb3SAAQAIABEAGgAjAC0AMgA3AEAARgBNAFUAYABnAGoAbABuAHEAcwB1AHcAhACOANAA1QDdAr0CvwLEAs8C2ALmAuoC8QL6Av8DDAMPAyEDJAMpAAAAAAAAAgEAAAAAAAAAKAAAAAAAAAAAAAAAAAAAAys=}}
1371
1372 @article{Yeo,
1373 Abstract = {Single crystal adsorption calorimetry was applied to investigate the heats of adsorption of CO and oxygen and the reaction heats for the CO oxidation process on Pt􏰊111􏰋 at room temperature. Both sticking probabilities and heats of adsorption for CO and oxygen are presented as a function of coverage. These results are used to interpret the subsequent measurements taken for the CO oxidation process on the same surface. The initial heats of adsorption of CO and oxygen on Pt􏰊111􏰋 are 180􏰛8 and 339􏰛32 kJ/mol, respectively. In addition the pairwise lateral repulsive interaction between CO molecules in a 􏰔􏰜3􏰙􏰜3􏰈R30$\,^{\circ}$ ordered layer at 􏰒􏰚1/3 is found to be 4 kJ/mol. A detailed Monte Carlo modeling of the dissociative adsorption and sticking probability of oxygen on Pt􏰊111􏰋 is performed. The initial rapid fall in heat is attributed to adsorption on defect sites, and subsequent adsorption on the planar 􏰊111􏰋 surface proceeds with a third neighbor interaction energy between the oxygen adatoms 􏰓3􏰌22 kJ/mol. When gaseous CO reacts with preadsorbed oxygen adatoms, the CO2 produced has an excess energy of 16􏰛8 kJ/mol. {\copyright} 1997 American Institute of Physics. 􏰎S0021-9606􏰔97􏰈02601-9􏰉},
1374 Author = {Y. Y. Yeo and L. Vattuone and D. A. King},
1375 Date-Added = {2012-08-30 21:41:16 +0000},
1376 Date-Modified = {2012-08-30 21:53:19 +0000},
1377 Journal = {J. Chem. Phys.},
1378 Keywords = {Calorimetry and CO and Platinum and 111 and Adsorption},
1379 Month = {January},
1380 Pages = {392-402},
1381 Title = {Calorimetric heats for CO and oxygen adsorption and for the catalytic CO oxidation reaction on Pt{111}},
1382 Volume = {106},
1383 Year = {1997},
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1385
1386 @article{Feibelman:2001,
1387 Abstract = {Notwithstanding half a dozen theoretical publications, well-converged density- functional calculations, whether based on a local-density or generalized-gradient exchange-correlation potential, whether all-electron or employing pseudopotentials, underestimate CO's preference for low-coordination binding sites on Pt(111) and vicinals to it. For example, they imply that CO should prefer hollow- to atop-site adsorption on Pt(111), in apparent contradiction to a host of low-temperature experimental studies.},
1388 Author = {P. J. Feibelman and et al.},
1389 Date-Added = {2012-08-30 20:46:42 +0000},
1390 Date-Modified = {2012-12-13 20:08:45 +0000},
1391 Journal = {J. Phys. Chem. B},
1392 Keywords = {CO and Platinum},
1393 Pages = {4018-4025},
1394 Title = {The CO/Pt(111) Puzzle},
1395 Volume = {105},
1396 Year = {2001},
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1398
1399 @article{Kelemen:1979,
1400 Abstract = {The desorption of CO from clean Pt(lll) and (loo), and from the same surfaces with par- tial overlayers of sulfur, was studied by Thermal Desorption Spectroscopy. The method of desorption rate isotherms was employed for data analysis. The desorption of CO from the (Ill) surface and both surfaces with ordered sulfur overlayers can be described as a first order process with coverage dependent activation energies. The desorption of CO from the clean Pt(100) surface is complicated by the dynamic interaction of the molecule with a thermally activated change of platinum surface structure. On both platinum faces surface sulfur decreases the initial binding energy of CO. As the CO concentration increases, its binding energy decreases very rapidly. This is due to a repulsive interaction which exists between co-adsorbed species.},
1401 Author = {S.R. Kelemen and T.E. Fischer and J.A. Schwarz},
1402 Date-Added = {2012-08-30 19:49:26 +0000},
1403 Date-Modified = {2012-12-13 20:03:25 +0000},
1404 Journal = {Surface Science},
1405 Keywords = {Platinum and CO},
1406 Pages = {440-450},
1407 Rating = {5},
1408 Read = {1},
1409 Title = {The Binding Energy of CO on Clean and Sulfur Covered Platinum Surfaces},
1410 Year = {1979},
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1412
1413 @misc{openmd,
1414 Author = {J. Daniel Gezelter and Joseph Michalka and Shenyu Kuang and James Marr and Kelsey Stocker and Chunlei Li and Charles F. Vardeman and Teng Lin and Christopher J. Fennell and Xiuquan Sun and Kyle Daily and Yang Zheng and Matthew A. Meineke},
1415 Date-Added = {2011-11-18 15:32:23 -0500},
1416 Date-Modified = {2011-11-18 15:32:23 -0500},
1417 Howpublished = {Available at {\tt http://openmd.org}},
1418 Title = {{OpenMD, an Open Source Engine for Molecular Dynamics}}}