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Revision 4161 by kstocke1, Thu May 29 16:33:41 2014 UTC vs.
Revision 4201 by kstocke1, Fri Aug 1 18:55:09 2014 UTC

# Line 86 | Line 86 | protected by mixed-chain alkanethiolate groups.\cite{k
86   Previously, reverse nonequilibrium molecular dynamics (RNEMD) methods
87   have been applied to calculate the interfacial thermal conductance at
88   flat (111) metal / organic solvent interfaces that had been chemically
89 < protected by mixed-chain alkanethiolate groups.\cite{kuang:AuThl}
89 > protected by varying coverages of alkanethiolate groups.\cite{kuang:AuThl}
90   These simulations suggested an explanation for the increased thermal
91   conductivity at alkanethiol-capped metal surfaces compared with bare
92   metal interfaces.  Specifically, the chemical bond between the metal
# Line 119 | Line 119 | and the effect of those gaps on the thermal conductanc
119   curvature that creates gaps in well-ordered self-assembled monolayers,
120   and the effect of those gaps on the thermal conductance is unknown.
121  
122
123
122   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
123   %               INTERFACIAL THERMAL CONDUCTANCE OF METALLIC NANOPARTICLES
124   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# Line 178 | Line 176 | lattice.  To match surface coverages previously report
176  
177   In this work, thiolated gold nanospheres were modeled using a united atom force field and non-equilibrium molecular dynamics. Gold nanoparticles
178   with radii ranging from 10 - 25 \AA\ were created from a bulk fcc
179 < lattice.  To match surface coverages previously reported by Badia,
180 < \textit{et al.}\cite{Badia1996:2}, these particles were passivated
183 < with a 50\% coverage of a selection of alkyl thiolates of varying
179 > lattice.  These particles were passivated
180 > with a 50\% coverage -- based on coverage densities reported by Badia \textit{et al.} -- of a selection of alkyl thiolates of varying
181   chain lengths. The passivated particles were then solvated in hexane.
182   Details of the models and simulation protocol follow in the next
183   section.
184  
185   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
186 + %               COMPUTATIONAL DETAILS
187 + %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
188 + \section{Computational Details}
189 +
190 + %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
191   %               NON-PERIODIC VSS-RNEMD METHODOLOGY
192   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
193   \subsection{Creating a thermal flux between particles and solvent}
# Line 256 | Line 258 | interfacial thermal conductance of the ligand layer.
258   interfacial thermal conductance of the ligand layer.
259  
260   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
259 %               COMPUTATIONAL DETAILS
260 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
261 \section{Computational Details}
262
263 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
261   %               FORCE FIELDS
262   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
263   \subsection{Force Fields}
264  
265   Throughout this work, gold -- gold interactions are described by the
266 < quantum Sutton-Chen (QSC) model.\cite{PhysRevB.59.3527} The hexane
266 > quantum Sutton-Chen (QSC) model.\cite{PhysRevB.59.3527} Previous work\cite{kuang:AuThl} has demonstrated that the electronic contributions to heat conduction (which are missing from the QSC model) across heterogeneous metal / non-metal interfaces are negligible compared to phonon excitation, which is captured by the classical model. The hexane
267   solvent is described by the TraPPE united atom
268   model,\cite{TraPPE-UA.alkanes} where sites are located at the carbon
269   centers for alkyl groups. The TraPPE-UA model for hexane provides both
# Line 284 | Line 281 | surface.\cite{hautman:4994}
281   widely-used effective potential of Hautman and Klein for the Au(111)
282   surface.\cite{hautman:4994}
283  
287
288
284   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
285   %               SIMULATION PROTOCOL
286   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# Line 329 | Line 324 | Because the method conserves \emph{total} angular mome
324   coupling to the external temperature bath was removed to avoid
325   interference with the imposed RNEMD flux.
326  
327 + \begin{figure}
328 +        \includegraphics[width=\linewidth]{figures/temp_profile}
329 +        \caption{Radial temperature profile for a 25 \AA\ radius particle protected with a 50\% coverage of TraPPE-UA butanethiolate (C$_4$) ligands and solvated in TraPPE-UA hexane. A kinetic energy flux is applied between RNEMD region A and RNEMD region B. The size of the temperature discontinuity at the interface is governed by the interfacial thermal conductance.}
330 +        \label{fig:temp_profile}
331 + \end{figure}
332 +
333   Because the method conserves \emph{total} angular momentum and energy,
334   systems which contain a metal nanoparticle embedded in a significant
335   volume of solvent will still experience nanoparticle diffusion inside
# Line 394 | Line 395 | nanoparticles.
395   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
396   \section{Mechanisms for Ligand-Enhanced Heat Transfer}
397  
398 + corrugation
399 +
400 + escape rate
401 +
402 + orientation of ligand
403 +
404 + orientation of solvent
405 +
406   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
407   %               CORRUGATION OF PARTICLE SURFACE
408   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# Line 651 | Line 660 | that lacks well-formed channels for the solvent molecu
660   and a lower ligand packing density creates a disordered ligand layer
661   that lacks well-formed channels for the solvent molecules to occupy.
662  
654 % \begin{figure}
655 %       \includegraphics[width=\linewidth]{figures/hex_pAngle}
656 %       \caption{}
657 %       \label{fig:hex_pAngle}
658 % \end{figure}
659
663   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
664   %               SOLVENT PENETRATION OF LIGAND LAYER
665   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# Line 697 | Line 700 | conductance value than the bare nanoparticle. The depe
700   vibrational overlap that is not present between the bare metal surface
701   and solvent. Thus, regardless of ligand chain length, the presence of
702   a half-monolayer ligand coverage yields a higher interfacial thermal
703 < conductance value than the bare nanoparticle. The dependence of the
701 < interfacial thermal conductance on ligand chain length is primarily
702 < explained by increased ligand flexibility and a corresponding decrease
703 < in solvent mobility away from the particles.  The shortest and least
703 > conductance value than the bare nanoparticle. The shortest and least
704   flexible ligand ($C_4$), which exhibits the highest interfacial
705   thermal conductance value, has a smaller range of available angles relative to
706 < the surface normal and is least likely to trap solvent molecules
707 < within the ligand layer. The longer $C_8$ and $C_{12}$ ligands have
706 > the surface normal. The longer $C_8$ and $C_{12}$ ligands have
707   increasingly disordered orientations and correspondingly lower solvent
708 < escape rates.
710 <
711 < When the ligands are less tightly packed, the cooperative
708 > escape rates. When the ligands are less tightly packed, the cooperative
709   orientational ordering between the ligand and solvent decreases
710 < dramatically and the conductive heat transfer model plays a much
714 < smaller role in determining the total interfacial thermal
715 < conductance. Thus, heat transfer into the solvent relies primarily on
716 < the convective model, where solvent molecules pick up thermal energy
717 < from the ligands and diffuse into the bulk solvent. This mode of heat
718 < transfer is hampered by a slow solvent escape rate, which is clearly
719 < present in the randomly ordered long ligand layers.
710 > dramatically.
711  
712   %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
713   % **ACKNOWLEDGMENTS**

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