| 21 |
|
% Add 'draft' option to mark overfull boxes with black boxes |
| 22 |
|
% Add 'showpacs' option to make PACS codes appear |
| 23 |
|
%\documentclass[aps,jcp,twocolumn,showpacs,superscriptaddress,groupedaddress]{revtex4} % for review and submission |
| 24 |
< |
\documentclass[aps,jcp,preprint,showpacs,superscriptaddress,groupedaddress]{revtex4} % for double-spaced preprint |
| 24 |
> |
\documentclass[aps,jcp,preprint,showpacs,superscriptaddress,groupedaddress]{revtex4-1} % for double-spaced preprint |
| 25 |
|
\usepackage{graphicx} % needed for figures |
| 26 |
– |
\usepackage{dcolumn} % needed for some tables |
| 26 |
|
\usepackage{bm} % for math |
| 27 |
|
\usepackage{amssymb} % for math |
| 29 |
– |
%\usepackage{booktabs} |
| 30 |
– |
\usepackage{multirow} |
| 31 |
– |
\usepackage{tablefootnote} |
| 28 |
|
\usepackage{times} |
| 29 |
|
\usepackage[version=3]{mhchem} |
| 30 |
|
\usepackage{lineno} |
| 44 |
|
Molecular dynamics simulations of thiolate-protected and solvated |
| 45 |
|
gold nanoparticles were carried out in the presence of a |
| 46 |
|
non-equilibrium heat flux between the solvent and the core of the |
| 47 |
< |
particle. The interfacial thermal conductance ($G$) was computed |
| 48 |
< |
for these interfaces, and the behavior of the thermal conductance |
| 49 |
< |
was studied as a function of particle size, ligand flexibility, and |
| 47 |
> |
particle. The interfacial thermal conductance ($G$) was computed for |
| 48 |
> |
these interfaces, and the behavior of the thermal conductance was |
| 49 |
> |
studied as a function of particle size, ligand flexibility, and |
| 50 |
|
ligand chain length. In all cases, thermal conductance of the |
| 51 |
|
ligand-protected particles was higher than the bare metal--solvent |
| 52 |
|
interface. A number of mechanisms for the enhanced conductance were |
| 53 |
|
investigated, including thiolate-driven corrugation of the metal |
| 54 |
|
surface, solvent ordering at the interface, solvent-ligand |
| 55 |
|
interpenetration, and ligand ordering relative to the particle |
| 56 |
< |
surface. MORE HERE. |
| 56 |
> |
surface. Only the smallest particles exhibited significant |
| 57 |
> |
corrugation. All ligands permitted substantial solvent-ligand |
| 58 |
> |
interpenetration, and ligand chain length has a significant |
| 59 |
> |
influence on the orientational ordering of interfacial solvent. |
| 60 |
> |
Solvent -- ligand vibrational overlap, particularly in the low |
| 61 |
> |
frequency range ($< 80 \mathrm{cm}^{-1}$) was significantly altered |
| 62 |
> |
by ligand rigidity, and had direct influence on the interfacial |
| 63 |
> |
thermal conductance. |
| 64 |
|
\end{abstract} |
| 65 |
|
|
| 66 |
|
\pacs{} |
| 167 |
|
surfaces of spherical nanoparticles. Thus, as new applications of |
| 168 |
|
ligand-stabilized nanostructures have been proposed, the structure and |
| 169 |
|
dynamics of ligands on metallic nanoparticles have been studied using |
| 170 |
< |
molecular simulation,\cite{Henz2007,Henz:2008qf} NMR, XPS, FTIR, |
| 170 |
> |
molecular simulation,\cite{Henz:2008qf} NMR, XPS, FTIR, |
| 171 |
|
calorimetry, and surface |
| 172 |
|
microscopies.\cite{Badia1996:2,Badia1996,Badia1997:2,Badia1997,Badia2000} |
| 173 |
|
Badia, \textit{et al.} used transmission electron microscopy to |
| 179 |
|
neighboring particles.\cite{Badia1996} The molecular dynamics |
| 180 |
|
simulations of Henz, \textit{et al.} indicate that at low coverages, |
| 181 |
|
the thiolate alkane chains will lie flat on the nanoparticle |
| 182 |
< |
surface\cite{Henz2007,Henz:2008qf} Above 90\% coverage, the ligands |
| 182 |
> |
surface\cite{Henz:2008qf} Above 90\% coverage, the ligands |
| 183 |
|
stand upright and recover the rigidity and tilt angle displayed on |
| 184 |
|
planar facets. Their simulations also indicate a high degree of mixing |
| 185 |
|
between the thiolate sulfur atoms and surface gold atoms at high |
| 209 |
|
\protect\cite{landman:1998},~\protect\cite{vlugt:cpc2007154},~and |
| 210 |
|
\protect\cite{hautman:4994}.} |
| 211 |
|
\label{fig:structures} |
| 212 |
+ |
\bibpunct{[}{]}{,}{n}{}{,} |
| 213 |
|
\end{figure} |
| 214 |
|
|
| 215 |
|
|
| 307 |
|
intra-molecular sites closer than 3 bonds. Effective Lennard-Jones |
| 308 |
|
potentials were used for non-bonded interactions. |
| 309 |
|
|
| 310 |
< |
To describe the interactions between metal (Au) and non-metal atoms, |
| 311 |
< |
potential energy terms were adapted from an adsorption study of alkyl |
| 312 |
< |
thiols on gold surfaces by Vlugt, \textit{et |
| 313 |
< |
al.}\cite{vlugt:cpc2007154} They fit an effective pair-wise |
| 310 |
> |
The TraPPE-UA force field includes parameters for thiol |
| 311 |
> |
molecules\cite{TraPPE-UA.thiols} as well as unsaturated and aromatic |
| 312 |
> |
carbon sites.\cite{TraPPE-UA.alkylbenzenes} These were used for the |
| 313 |
> |
thiolate molecules in our simulations, and missing parameters for the |
| 314 |
> |
ligands were supplemented using fits described in the supporting |
| 315 |
> |
information. Bonds are typically rigid in TraPPE-UA, so although |
| 316 |
> |
equilibrium bond distances were taken from TraPPE-UA, flexible bonds |
| 317 |
> |
were allowed bond stretching spring constants from the OPLS-AA force |
| 318 |
> |
field.\cite{Jorgensen:1996sf} |
| 319 |
> |
|
| 320 |
> |
To derive suitable parameters for the thiolates adsorbed on Au(111) |
| 321 |
> |
surfaces, we adopted the S parameters from Luedtke and |
| 322 |
> |
Landman\cite{landman:1998} and modified the parameters for the CTS |
| 323 |
> |
atom to maintain charge neutrality in the molecule. |
| 324 |
> |
|
| 325 |
> |
Other interactions between metal (Au) and non-metal atoms were adapted |
| 326 |
> |
from an adsorption study of alkyl thiols on gold surfaces by Vlugt, |
| 327 |
> |
\textit{et al.}\cite{vlugt:cpc2007154} They fit an effective pair-wise |
| 328 |
|
Lennard-Jones form of potential parameters for the interaction between |
| 329 |
|
Au and pseudo-atoms CH$_x$ and S based on a well-established and |
| 330 |
|
widely-used effective potential of Hautman and Klein for the Au(111) |
| 331 |
|
surface.\cite{hautman:4994} |
| 332 |
|
|
| 333 |
< |
Additional terms to represent thiolated alkenes and conjugated ligand |
| 334 |
< |
moieties were parameterized as part of this work and are available in |
| 335 |
< |
the supporting information. |
| 333 |
> |
All additional terms to represent thiolated alkenes and conjugated |
| 334 |
> |
ligand moieties were parameterized as part of this work and are |
| 335 |
> |
available in the supporting information. |
| 336 |
|
|
| 337 |
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 338 |
|
% SIMULATION PROTOCOL |
| 497 |
|
surface restructuring may have an impact on the interfacial thermal |
| 498 |
|
conductance and is an important phenomenon to quantify. |
| 499 |
|
|
| 500 |
< |
Henz, \textit{et al.}\cite{Henz2007,Henz:2008qf} used the metal |
| 500 |
> |
Henz, \textit{et al.}\cite{Henz:2008qf} used the metal |
| 501 |
|
density as a function of radius to measure the degree of mixing |
| 502 |
|
between the thiol sulfurs and surface gold atoms at the edge of a |
| 503 |
|
nanoparticle. Although metal density is important, disruption of the |