| 1 |
gezelter |
1334 |
##################################################### |
| 2 |
|
|
# Makefile for Oopse Utility Codes # |
| 3 |
|
|
##################################################### |
| 4 |
|
|
# You should not change anything here. # |
| 5 |
|
|
##################################################### |
| 6 |
|
|
|
| 7 |
|
|
TOP=../.. |
| 8 |
|
|
|
| 9 |
|
|
.SUFFIXES : .cpp .c $(O) |
| 10 |
|
|
|
| 11 |
|
|
# Extension of object files |
| 12 |
|
|
O=@OBJEXT@ |
| 13 |
|
|
|
| 14 |
|
|
# Extension of executables |
| 15 |
|
|
EXE=@EXEEXT@ |
| 16 |
|
|
|
| 17 |
|
|
# Bourn shell |
| 18 |
|
|
SHELL=/bin/sh |
| 19 |
|
|
|
| 20 |
|
|
# Path prefix for installation links |
| 21 |
|
|
PREFIX=@prefix@ |
| 22 |
|
|
|
| 23 |
|
|
# List of subdirectories |
| 24 |
|
|
SUBDIRS=@SUBDIRS@ |
| 25 |
|
|
|
| 26 |
|
|
# Location of the oopse home |
| 27 |
|
|
OOPSE_HOME=@OOPSE_HOME@ |
| 28 |
|
|
|
| 29 |
|
|
FORCE_PARAM_DIR=@OOPSE_HOME@/share/forceFields/ |
| 30 |
|
|
SAMPLE_SIM_DIR=@OOPSE_HOME@/share/samples/ |
| 31 |
|
|
|
| 32 |
|
|
# SPRNG library path |
| 33 |
|
|
SPRNG_LIBDIR=@SPRNG_LIBDIR@ |
| 34 |
|
|
|
| 35 |
|
|
# SPRNG library |
| 36 |
|
|
SPRNG_LIB=@SPRNG_LIB@ |
| 37 |
|
|
|
| 38 |
|
|
# SPRNG include path |
| 39 |
|
|
SPRNG_INC=@SPRNG_INC@ |
| 40 |
|
|
|
| 41 |
|
|
# MPICH library path |
| 42 |
|
|
MPI_LIBDIR=@MPI_LIBDIR@ |
| 43 |
|
|
|
| 44 |
|
|
# MPICH library |
| 45 |
|
|
MPI_LIB=@MPI_LIB@ |
| 46 |
|
|
|
| 47 |
|
|
# MPICH include path |
| 48 |
|
|
MPI_INC=@MPI_INC@ |
| 49 |
|
|
|
| 50 |
|
|
# MPI F90 Module path |
| 51 |
|
|
MPI_F90_MODS=@MPI_F90_MODS@ |
| 52 |
|
|
|
| 53 |
|
|
# Compiler dependent Fortran module |
| 54 |
|
|
F90LIBS = @F90LIBS@ |
| 55 |
|
|
|
| 56 |
|
|
# Location of yacc (or its substitution) |
| 57 |
|
|
YACC=@YACC@ |
| 58 |
|
|
|
| 59 |
|
|
#location of lex |
| 60 |
|
|
LEX=@LEX@ |
| 61 |
|
|
|
| 62 |
|
|
# C compiler |
| 63 |
|
|
CC=@CC@ |
| 64 |
|
|
|
| 65 |
|
|
# C++ compiler |
| 66 |
|
|
|
| 67 |
|
|
CXX=@CXX@ |
| 68 |
|
|
|
| 69 |
|
|
# F90 compiler |
| 70 |
|
|
F90=@F90@ |
| 71 |
|
|
|
| 72 |
|
|
# ar |
| 73 |
|
|
AR=@AR@ |
| 74 |
|
|
|
| 75 |
|
|
# ranlib |
| 76 |
|
|
RANLIB=@RANLIB@ |
| 77 |
|
|
|
| 78 |
|
|
# rm |
| 79 |
|
|
RM=rm -f |
| 80 |
|
|
|
| 81 |
|
|
# soft link |
| 82 |
|
|
LN_S=@LN_S@ |
| 83 |
|
|
|
| 84 |
|
|
# BSD install |
| 85 |
|
|
INSTALL=@INSTALL@ |
| 86 |
|
|
INSTALL_PROGRAM=@INSTALL_PROGRAM@ |
| 87 |
|
|
INSTALL_DATA=@INSTALL_DATA@ |
| 88 |
|
|
MKINSTALLDIRS=@MKINSTALLDIRS@ |
| 89 |
|
|
|
| 90 |
|
|
# CPP flags |
| 91 |
|
|
CPPFLAGS=@CPPFLAGS@ |
| 92 |
|
|
|
| 93 |
|
|
# C flags |
| 94 |
|
|
CFLAGS_C=@CFLAGS@ |
| 95 |
|
|
|
| 96 |
|
|
# C++ flags |
| 97 |
|
|
CXXFLAGS_C=@CXXFLAGS@ |
| 98 |
|
|
|
| 99 |
|
|
# Preprocessor flag for fortran |
| 100 |
|
|
PREPFLAG=@PREPFLAG@ |
| 101 |
|
|
|
| 102 |
|
|
# Preprocessor define flag for fortran |
| 103 |
|
|
PREPDEFFLAG=@PREPDEFFLAG@ |
| 104 |
|
|
|
| 105 |
|
|
# Fortran flags |
| 106 |
|
|
FFLAGS_C=@F90FLAGS@ |
| 107 |
|
|
|
| 108 |
|
|
# LDFLAGS |
| 109 |
|
|
LDFLAGS=@LDFLAGS@ |
| 110 |
|
|
|
| 111 |
|
|
MPI_DECLARES= -DIS_MPI |
| 112 |
|
|
|
| 113 |
|
|
# include paths starting with "." are all relative to the SUBDIRS!!! |
| 114 |
|
|
|
| 115 |
|
|
INCLUDES= -I.. -I$(TOP)/../libBASS -I$(TOP)/../libmdtools |
| 116 |
|
|
CFLAGS=$(CFLAGS_C) $(INCLUDES) $(DECLARES) |
| 117 |
|
|
CXXFLAGS=$(CXXFLAGS_C) $(INCLUDES) $(DECLARES) |
| 118 |
|
|
DEPFLAGS=$(CFLAGS_C) -I. $(SPRNG_INC) -I$(TOP)/libBASS -I$(TOP)/libmdtools |
| 119 |
|
|
|
| 120 |
|
|
|
| 121 |
|
|
SYSBUILD=sysBuild$(EXE) |
| 122 |
|
|
BUILDER_LIB=libBuilder.a |
| 123 |
|
|
LBILAYER=latticeBilayer$(EXE) |
| 124 |
|
|
RBILAYER=randomBilayer$(EXE) |
| 125 |
|
|
|
| 126 |
|
|
BASS_LIB=$(TOP)/libBASS/libBASS.a |
| 127 |
|
|
MD_LIB=$(TOP)/libmdtools/libmdtools.a |
| 128 |
|
|
LIBS=$(BASS_LIB) $(MD_LIB) |
| 129 |
|
|
|
| 130 |
|
|
#SYSBUILD_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIBDIR) |
| 131 |
|
|
#SYSBUILD_LDADD=-lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) |
| 132 |
|
|
|
| 133 |
|
|
|
| 134 |
|
|
SRC_DIR := $(PWD) |
| 135 |
|
|
|
| 136 |
|
|
LBILAYER_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIBDIR) -L$(SRC_DIR) |
| 137 |
|
|
LBILAYER_LDADD=-lBuilder -lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) |
| 138 |
|
|
|
| 139 |
|
|
RBILAYER_LDFLAGS=-L$(TOP)/libBASS -L$(TOP)/libmdtools -L$(SPRNG_LIBDIR) -L$(SRC_DIR) |
| 140 |
|
|
RBILAYER_LDADD=-lBuilder -lmdtools -lBASS $(SPRNG_LIB) $(F90LIBS) |
| 141 |
|
|
|
| 142 |
|
|
PREFS=-DOOPSE_HOME=\"$(OOPSE_HOME)\" |
| 143 |
|
|
|
| 144 |
|
|
obj/%.o: %.cpp |
| 145 |
|
|
cd obj; $(CXX) $(CXXFLAGS) -c $(SRC_DIR)/$< |
| 146 |
|
|
|
| 147 |
|
|
MPIobj/%.o: %.cpp |
| 148 |
|
|
cd MPIobj; $(CXX) $(MPI_CXXFLAGS) -c $(SRC_DIR)/$< |
| 149 |
|
|
|
| 150 |
|
|
obj/%.o: %.c |
| 151 |
|
|
cd obj; $(CC) $(CFLAGS) -c $(SRC_DIR)/$< |
| 152 |
|
|
|
| 153 |
|
|
MPIobj/%.o: %.c |
| 154 |
|
|
cd MPIobj; $(CC) $(MPI_CFLAGS) -c $(SRC_DIR)/$< |
| 155 |
|
|
|
| 156 |
|
|
# sysBuilder files |
| 157 |
|
|
|
| 158 |
|
|
#SYSBUILD_C_FILES = $(DIR)/cmdline.c |
| 159 |
|
|
#SYSBUILD_CXX_FILES = \ |
| 160 |
|
|
# $(DIR)/sysBuild.cpp \ |
| 161 |
|
|
# $(DIR)/bilayerSys.cpp \ |
| 162 |
|
|
# $(DIR)/MoLocator.cpp \ |
| 163 |
|
|
# $(DIR)/latticeBuilder.cpp \ |
| 164 |
|
|
# $(DIR)/nanoBuilder.cpp |
| 165 |
|
|
|
| 166 |
|
|
#latticeBilayer files |
| 167 |
|
|
|
| 168 |
|
|
LBILAYER_CXX_FILES = $(DIR)/latticeBilayer.cpp |
| 169 |
|
|
|
| 170 |
|
|
RBILAYER_CXX_FILES = $(DIR)/randomBilayer.cpp |
| 171 |
|
|
|
| 172 |
|
|
# libBuilder files |
| 173 |
|
|
|
| 174 |
|
|
BUILDER_LIB_CXX_FILES = \ |
| 175 |
|
|
$(DIR)/MoLocator.cpp \ |
| 176 |
|
|
$(DIR)/latticeBuilder.cpp |
| 177 |
|
|
|
| 178 |
|
|
|
| 179 |
|
|
# the sources |
| 180 |
|
|
|
| 181 |
|
|
DIR:=. |
| 182 |
|
|
|
| 183 |
|
|
#SYSBUILD_C_SRCS := $(SYSBUILD_C_FILES) |
| 184 |
|
|
#SYSBUILD_CXX_SRCS := $(SYSBUILD_CXX_FILES) |
| 185 |
|
|
#SYSBUILD_SRCS := $(SYSBUILD_C_SRCS) $(SYSBUILD_CXX_SRCS) |
| 186 |
|
|
|
| 187 |
|
|
LBILAYER_CXX_SRCS := $(LBILAYER_CXX_FILES) |
| 188 |
|
|
LBILAYER_SRCS := $(LBILAYER_CXX_SRCS) |
| 189 |
|
|
|
| 190 |
|
|
RBILAYER_CXX_SRCS := $(RBILAYER_CXX_FILES) |
| 191 |
|
|
RBILAYER_SRCS := $(RBILAYER_CXX_SRCS) |
| 192 |
|
|
|
| 193 |
|
|
BUILDER_LIB_CXX_SRCS := $(BUILDER_LIB_CXX_FILES) |
| 194 |
|
|
BUILDER_LIB_SRCS := $(BUILDER_LIB_CXX_SRCS) |
| 195 |
|
|
|
| 196 |
|
|
C_CXX_SRCS := $(LBILAYER_SRCS) $(BUILDER_LIB_SRCS) $(RBILAYER_SRCS) |
| 197 |
|
|
|
| 198 |
|
|
C_SRCS := |
| 199 |
|
|
CXX_SRCS := $(LBILAYER_CXX_SRCS) $(BUILDER_LIB_CXX_SRCS) $(RBILAYER_CXX_SRCS) |
| 200 |
|
|
|
| 201 |
|
|
#the objects |
| 202 |
|
|
|
| 203 |
|
|
DIR:=obj |
| 204 |
|
|
|
| 205 |
|
|
#SYSBUILD_C_OBJS := $(SYSBUILD_C_FILES:.c=.o) |
| 206 |
|
|
#SYSBUILD_CXX_OBJS := $(SYSBUILD_CXX_FILES:.cpp=.o) |
| 207 |
|
|
#SYSBUILD_OBJS := $(SYSBUILD_C_OBJS) $(SYSBUILD_CXX_OBJS) |
| 208 |
|
|
|
| 209 |
|
|
LBILAYER_CXX_OBJS := $(LBILAYER_CXX_FILES:.cpp=.o) |
| 210 |
|
|
LBILAYER_OBJS := $(LBILAYER_CXX_OBJS) |
| 211 |
|
|
|
| 212 |
|
|
RBILAYER_CXX_OBJS := $(RBILAYER_CXX_FILES:.cpp=.o) |
| 213 |
|
|
RBILAYER_OBJS := $(RBILAYER_CXX_OBJS) |
| 214 |
|
|
|
| 215 |
|
|
BUILDER_LIB_CXX_OBJS := $(BUILDER_LIB_CXX_FILES:.cpp=.o) |
| 216 |
|
|
BUILDER_LIB_OBJS := $(BUILDER_LIB_CXX_OBJS) |
| 217 |
|
|
|
| 218 |
|
|
LIBSUBDIRS = \ |
| 219 |
|
|
obj |
| 220 |
|
|
|
| 221 |
|
|
all : $(BUILDER_LIB) $(LBILAYER) $(RBILAYER) |
| 222 |
|
|
|
| 223 |
|
|
depend: Make.dep |
| 224 |
|
|
|
| 225 |
|
|
#sysBuild$(EXE) : $(SYSBUILD_OBJS) $(BASS_LIB) $(MD_LIB) |
| 226 |
|
|
# $(CXX) $(CXXFLAGS) $(SYSBUILD_OBJS) -o $@ $(SYSBUILD_LDFLAGS) $(SYSBUILD_LDADD) |
| 227 |
|
|
|
| 228 |
|
|
libBuilder.a: $(BUILDER_LIB_OBJS) |
| 229 |
|
|
$(RM) $@ |
| 230 |
|
|
$(AR) cr $@ $(BUILDER_LIB_OBJS) |
| 231 |
|
|
$(RANLIB) $@ |
| 232 |
|
|
|
| 233 |
|
|
latticeBilayer$(EXE): $(LBILAYER_OBJS) $(BUILDER_LIB) $(BASS_LIB) $(MD_LIB) |
| 234 |
|
|
$(CXX) $(CXXFLAGS) $(LBILAYER_OBJS) -o $@ $(LBILAYER_LDFLAGS) $(LBILAYER_LDADD) |
| 235 |
|
|
|
| 236 |
|
|
randomBilayer$(EXE): $(RBILAYER_OBJS) $(BUILDER_LIB) $(BASS_LIB) $(MD_LIB) |
| 237 |
|
|
$(CXX) $(CXXFLAGS) $(RBILAYER_OBJS) -o $@ $(RBILAYER_LDFLAGS) $(RBILAYER_LDADD) |
| 238 |
|
|
|
| 239 |
|
|
install : $(LBILAYER) |
| 240 |
|
|
$(MKINSTALLDIRS) $(OOPSE_HOME)/bin |
| 241 |
|
|
$(INSTALL_PROGRAM) -s $(LBILAYER) $(OOPSE_HOME)/bin/$(LBILAYER) |
| 242 |
|
|
$(INSTALL_PROGRAM) -s $(RBILAYER) $(OOPSE_HOME)/bin/$(RBILAYER) |
| 243 |
|
|
|
| 244 |
|
|
|
| 245 |
|
|
tests : dummy |
| 246 |
|
|
|
| 247 |
|
|
|
| 248 |
|
|
$(OOPSE_HOME)/bin/$(LBILAYER) : $(LBILAYER) |
| 249 |
|
|
$(MAKE) install |
| 250 |
|
|
|
| 251 |
|
|
links : $(OOPSE_HOME)/bin/$(LBILAYER) |
| 252 |
|
|
$(MKINSTALLDIRS) $(PREFIX)/bin |
| 253 |
|
|
cd $(PREFIX)/bin; $(LN_S) -f $(OOPSE_HOME)/bin/$(LBILAYER) $(LBILAYER) |
| 254 |
|
|
cd $(PREFIX)/bin; $(LN_S) -f $(OOPSE_HOME)/bin/$(RBILAYER) $(RBILAYER) |
| 255 |
|
|
|
| 256 |
|
|
clean : dummy |
| 257 |
|
|
for i in $(LIBSUBDIRS); do \ |
| 258 |
|
|
(cd $$i; $(RM) *.o) || exit 1; \ |
| 259 |
|
|
done |
| 260 |
|
|
$(RM) $(LBILAYER) $(RBILAYER) $(BUILDER_LIB) *.o *~ Make.temp |
| 261 |
|
|
|
| 262 |
|
|
distclean : dummy |
| 263 |
|
|
for i in $(LIBSUBDIRS); do \ |
| 264 |
|
|
(cd $$i; $(RM) *.o) || exit 1; \ |
| 265 |
|
|
done |
| 266 |
|
|
$(RM) $(LBILAYER) $(RBILAYER) $(BUILDER_LIB) *.o *~ Make.temp |
| 267 |
|
|
|
| 268 |
|
|
devclean : distclean |
| 269 |
|
|
|
| 270 |
|
|
Make.dep : |
| 271 |
|
|
echo "# DO NOT DELETE THIS LINE - used by make depend" > Make.dep |
| 272 |
|
|
$(CC) $(DEPFLAGS) -MM $(C_SRCS) \ |
| 273 |
|
|
| sed 's/\.o:/\$$(O)\ :/g' > Make.temp |
| 274 |
|
|
$(CXX) $(DEPFLAGS) -MM $(CXX_SRCS) \ |
| 275 |
|
|
| sed 's/\.o:/\$$(O)\ :/g' >> Make.temp |
| 276 |
|
|
cat Make.temp | sed 's/^[a-zA-Z0-9]/obj\/&/g' >> Make.dep |
| 277 |
|
|
cat Make.temp | sed 's/^[a-zA-Z0-9]/MPIobj\/&/g' >> Make.dep |
| 278 |
|
|
$(RM) Make.temp |
| 279 |
|
|
|
| 280 |
|
|
tags : $(C_CXX_SRCS) |
| 281 |
|
|
ctags $(C_CXX_SRCS) |
| 282 |
|
|
|
| 283 |
|
|
dummy : |
| 284 |
|
|
|
| 285 |
|
|
# DO NOT DELETE |
| 286 |
|
|
include Make.dep |
