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Comparing trunk/OOPSE-2.0/ChangeLog (file contents):
Revision 1594 by tim, Mon Oct 18 23:13:23 2004 UTC vs.
Revision 1630 by tim, Thu Oct 21 21:31:39 2004 UTC

# Line 1 | Line 1
1 + 2004-10-21 15:15  gezelter
2 +
3 +        * src/: UseTheForce/DUFF.cpp, UseTheForce/EAM_FF.cpp,
4 +        UseTheForce/ForceFields.cpp, UseTheForce/ForceFields.hpp,
5 +        UseTheForce/LJFF.cpp, UseTheForce/Shapes_FF.cpp,
6 +        UseTheForce/WATER.cpp, UseTheForce/doForces.F90,
7 +        UseTheForce/doForces_interface.h, UseTheForce/fForceField.h,
8 +        UseTheForce/DarkSide/LJ.F90, UseTheForce/DarkSide/lj_interface.h,
9 +        brains/SimSetup.cpp, types/AtomTypeProperties.h: Breaky Breaky.  
10 +        Fixey Fixey.
11 +
12 + 2004-10-21 11:32  tim
13 +
14 +        * src/utils/GenericData.cpp, src/utils/Makefile,
15 +        test/utils/Makefile, test/utils/UtilTest: remove some junk files
16 +
17 + 2004-10-21 11:24  tim
18 +
19 +        * test/utils/GenericData.hpp: remove backup of  GenericData.hpp
20 +
21 + 2004-10-21 11:22  tim
22 +
23 +        * ChangeLog, src/brains/SimSetup.cpp,
24 +        src/constraints/ZConstraint.cpp, src/constraints/ZconsData.hpp,
25 +        src/integrators/NPT.cpp, src/integrators/NPTf.cpp,
26 +        src/integrators/NPTi.cpp, src/integrators/NPTxyz.cpp,
27 +        src/integrators/NVT.cpp, src/io/DumpReader.cpp,
28 +        src/io/InitializeFromFile.cpp, src/io/ZConsReader.cpp,
29 +        src/io/ZConsWriter.hpp, src/primitives/StuntDouble.hpp,
30 +        src/utils/GenericData.cpp, src/utils/GenericData.hpp,
31 +        src/visitors/AtomData.hpp, src/visitors/AtomVisitor.cpp,
32 +        src/visitors/AtomVisitor.hpp, src/visitors/CompositeVisitor.cpp,
33 +        src/visitors/CompositeVisitor.hpp, src/visitors/OtherVisitor.cpp,
34 +        src/visitors/OtherVisitor.hpp, src/visitors/RigidBodyVisitor.cpp,
35 +        src/visitors/RigidBodyVisitor.hpp, src/visitors/ZconsVisitor.cpp,
36 +        src/visitors/ZconsVisitor.hpp: replace old GebericData with  new
37 +        GenericData
38 +
39 + 2004-10-21 10:25  chuckv
40 +
41 +        * src/UseTheForce/DarkSide/: LJ.F90, eam.F90: Added newLJtype to lj
42 +        module.
43 +
44 + 2004-10-21 10:24  chuckv
45 +
46 +        * src/UseTheForce/DarkSide/lj_interface.h: Added interface for
47 +        fortran lj module.
48 +
49 + 2004-10-20 17:54  tim
50 +
51 +        * ChangeLog, src/utils/PropertyMap.cpp, src/utils/PropertyMap.hpp,
52 +        test/utils/GenericDataTestCase.cpp, test/utils/Makefile,
53 +        test/utils/PropertyMapTestCase.cpp,
54 +        test/utils/PropertyMapTestCase.hpp, test/utils/UtilTest:
55 +        GenericData and PropertyMap  pass unit test.
56 +
57 + 2004-10-20 16:52  gezelter
58 +
59 +        * src/UseTheForce/: DUFF.cpp, WATER.cpp, DarkSide/sticky.F90,
60 +        DarkSide/sticky_interface.h: fixed a fortran name problem
61 +
62 + 2004-10-20 16:38  tim
63 +
64 +        * test/utils/: GenericData.hpp, GenericDataTestCase.cpp,
65 +        GenericDataTestCase.hpp, Makefile, PropertyMapTestCase.hpp,
66 +        UtilTest, UtilTest.cpp: adding generic data test case
67 +
68 + 2004-10-20 16:16  chuckv
69 +
70 +        * configure, ac-tools/aclocal.m4,
71 +        src/UseTheForce/DarkSide/Makefile,
72 +        src/UseTheForce/DarkSide/mpiSimulation.F90,
73 +        src/UseTheForce/DarkSide/mpiSimulation_interface.h,
74 +        src/UseTheForce/DarkSide/simParallel.F90,
75 +        src/UseTheForce/DarkSide/simParallel_interface.h,
76 +        src/brains/mpiSimulation.cpp, src/brains/mpiSimulation.hpp:
77 +        Fortran/C++ interface de-obfuscation project appears to be
78 +        complete!  Woo hoo!
79 +
80 + 2004-10-20 15:47  chuckv
81 +
82 +        * src/UseTheForce/: fortranWrapDefines.hpp, fortranWrappers.cpp,
83 +        fortranWrappers.hpp: Fortran/C++ interface de-obfuscation project
84 +        continues
85 +
86 + 2004-10-20 15:46  chuckv
87 +
88 +        * src/: UseTheForce/DUFF.cpp, UseTheForce/EAM_FF.cpp,
89 +        UseTheForce/ForceFields.cpp, UseTheForce/ForceFields.hpp,
90 +        UseTheForce/LJFF.cpp, UseTheForce/Makefile, UseTheForce/WATER.cpp,
91 +        UseTheForce/doForces_interface.h,
92 +        UseTheForce/notifyCutoffs_interface.h, UseTheForce/wrappers.F90,
93 +        UseTheForce/DarkSide/atype_interface.h,
94 +        UseTheForce/DarkSide/eam_interface.h,
95 +        UseTheForce/DarkSide/gb_interface.h,
96 +        UseTheForce/DarkSide/mpiSimulation_interface.h,
97 +        UseTheForce/DarkSide/shapes_interface.h,
98 +        UseTheForce/DarkSide/simulation_interface.h,
99 +        UseTheForce/DarkSide/sticky_interface.h, brains/ForceFields.cpp,
100 +        brains/SimInfo.cpp, brains/SimInfo.hpp: Fortran/C++ interface
101 +        de-obfuscation project (It is a very long story)
102 +
103 + 2004-10-20 13:07  tim
104 +
105 +        * ChangeLog, src/math/SquareMatrix.hpp, src/math/SquareMatrix3.hpp,
106 +        test/math/SquareMatrix3TestCase.cpp,
107 +        test/math/SquareMatrixTestCase.cpp,
108 +        test/math/SquareMatrixTestCase.hpp: Math library pass the unit test
109 +
110 + 2004-10-20 00:52  tim
111 +
112 +        * src/brains/: Snapshot.hpp, SnapshotManager.hpp: Snapshot and
113 +        SnapshotManager in design phase
114 +
115 + 2004-10-19 23:54  gezelter
116 +
117 +        * src/: brains/SimSetup.cpp, utils/StringUtils.cpp: namespace
118 +        problem prevented linking
119 +
120 + 2004-10-19 23:54  gezelter
121 +
122 +        * src/UseTheForce/Shapes_FF.cpp: fixed include
123 +
124 + 2004-10-19 23:26  gezelter
125 +
126 +        * src/utils/: Makefile, definitions.F90, definitions_module.F90,
127 +        oopseMPI.F90, oopseMPI_module.F90, status.F90, status_module.F90:
128 +        more fortran name mangling
129 +
130 + 2004-10-19 23:23  gezelter
131 +
132 +        * src/profiling/timing.F90: yet more fortran renaming
133 +
134 + 2004-10-19 23:19  gezelter
135 +
136 +        * src/UseTheForce/: Makefile, doForces.F90, doForces_interface.h,
137 +        do_Forces.F90, do_Forces.h, notifyCutoffs.F90,
138 +        notifyCutoffs_interface.h, notifycutoffs_module_interface.h,
139 +        wrappers.F90: Fortran name cleanup continues
140 +
141 + 2004-10-19 23:12  gezelter
142 +
143 +        * src/UseTheForce/DarkSide/: atype.F90, simulation.F90: fixing some
144 +        broken fortran stuff
145 +
146 + 2004-10-19 23:02  gezelter
147 +
148 +        * src/UseTheForce/DarkSide/: LJ.F90, Makefile, atype.F90,
149 +        atype_interface.h, atype_module.F90, atype_module_interface.h,
150 +        calc_LJ_FF.F90, calc_charge_charge.F90, calc_dipole_dipole.F90,
151 +        calc_eam.F90, calc_gb.F90, calc_reaction_field.F90,
152 +        calc_shapes.F90, calc_sticky_pair.F90, charge.F90, dipole.F90,
153 +        eam.F90, eam_interface.h, eam_module_inteface.h, gb.F90,
154 +        gb_interface.h, gb_module_interface.h, mpiSimulation.F90,
155 +        mpiSimulation_interface.h, mpiSimulation_module.F90,
156 +        mpisimulation_module_interface.h, reactionField.F90, shapes.F90,
157 +        shapes_interface.h, shapes_module.h, simulation.F90,
158 +        simulation_interface.h, simulation_module.F90,
159 +        simulation_module_interface.h, sticky.F90, sticky_interface.h,
160 +        sticky_pair_module_interface.h, switch_module.F90, switcheroo.F90:
161 +        name sanity on the fortran side
162 +
163 + 2004-10-19 19:18  tim
164 +
165 +        * test/math/SquareMatrix3TestCase.hpp: [no log message]
166 +
167 + 2004-10-19 18:01  tim
168 +
169 +        * src/math/RectMatrix.hpp, src/math/SquareMatrix.hpp,
170 +        src/math/SquareMatrix3.hpp, test/math/SquareMatrix3TestCase.cpp:
171 +        except diagonalize(), all of functions in math library pass the
172 +        test
173 +
174 + 2004-10-19 17:43  chuckv
175 +
176 +        * src/UseTheForce/do_Forces.h: Added correct prototypes for
177 +        C-fortran interface functions.
178 +
179 + 2004-10-19 17:37  chuckv
180 +
181 +        * src/UseTheForce/DarkSide/: atype_module_interface.h,
182 +        eam_module_inteface.h, gb_module_interface.h,
183 +        mpisimulation_module_interface.h, simulation_module_interface.h,
184 +        sticky_pair_module_interface.h: Added correct prototypes for
185 +        C-fortran interface functions.
186 +
187 + 2004-10-19 16:28  tim
188 +
189 +        * ChangeLog, src/math/Quaternion.hpp, src/math/RectMatrix.hpp,
190 +        src/math/SquareMatrix.hpp, src/math/Vector.hpp,
191 +        test/math/QuaternionTestCase.cpp, test/math/QuaternionTestCase.hpp,
192 +        test/math/RectMatrixTestCase.cpp,
193 +        test/math/SquareMatrix3TestCase.cpp, test/math/Vector3TestCase.cpp,
194 +        test/math/Vector3TestCase.hpp, test/math/VectorTestCase.cpp: more
195 +        bugs get fixed at math library
196 +
197 + 2004-10-19 15:43  chuckv
198 +
199 +        * src/UseTheForce/: DarkSide/atype_module_interface.h,
200 +        DarkSide/eam_module_inteface.h, DarkSide/gb_module_interface.h,
201 +        DarkSide/mpisimulation_module_interface.h,
202 +        DarkSide/simulation_module_interface.h,
203 +        DarkSide/sticky_pair_module_interface.h, DarkSide/calc_eam.F90,
204 +        DarkSide/atype_module.F90, DarkSide/calc_gb.F90,
205 +        DarkSide/calc_sticky_pair.F90, DarkSide/mpiSimulation_module.F90,
206 +        DarkSide/simulation_module.F90, do_Forces.F90,
207 +        fortranWrapDefines.hpp, mpiComponentPlan.h, notifyCutoffs.F90,
208 +        notifycutoffs_module_interface.h: Added new files for fortran
209 +        interface.
210 +
211 + 2004-10-19 15:43  gezelter
212 +
213 +        * src/UseTheForce/Makefile: regressing
214 +
215 + 2004-10-19 15:40  gezelter
216 +
217 +        * src/: UseTheForce/DarkSide/calc_shapes.F90,
218 +        UseTheForce/DarkSide/shapes_module.h, utils/StringUtils.cpp:
219 +        working on shapes for portability
220 +
221 + 2004-10-19 15:40  gezelter
222 +
223 +        * src/UseTheForce/: Makefile, Shapes_FF.cpp: working on shapes
224 +
225 + 2004-10-19 13:21  chrisfen
226 +
227 +        * src/utils/: StringUtils.cpp, StringUtils.hpp: changed around
228 +        findBegin
229 +
230 + 2004-10-18 23:34  tim
231 +
232 +        * src/math/Vector.hpp, test/math/RectMatrixTestCase.cpp: more bugs
233 +        are fixed in Vector class
234 +
235 + 2004-10-18 23:28  tim
236 +
237 +        * test/math/: RectMatrixTestCase.cpp, RectMatrixTestCase.hpp: fix
238 +        some bugs in RectMatrixTestCase
239 +
240 + 2004-10-18 23:21  tim
241 +
242 +        * src/math/Vector.hpp, test/math/RectMatrixTestCase.cpp,
243 +        test/math/RectMatrixTestCase.hpp, test/math/Vector3TestCase.cpp,
244 +        test/math/Vector3TestCase.hpp, test/math/VectorTestCase.cpp,
245 +        test/math/VectorTestCase.hpp: implement more test cases
246 +
247 + 2004-10-18 18:13  tim
248 +
249 +        * ChangeLog, make/Doxyfile, src/math/Matrix3x3d.hpp,
250 +        src/math/RectMatrix.hpp, src/math/SquareMatrix.hpp,
251 +        src/math/SquareMatrix3.hpp, src/math/Vector.hpp,
252 +        src/utils/StringTokenizer.hpp, test/math/Makefile,
253 +        test/math/VectorTestCase.cpp, test/math/VectorTestCase.hpp: more
254 +        tests on math library
255 +
256 + 2004-10-18 16:03  tim
257 +
258 +        * test/math/: Makefile, QuaternionTestCase.cpp,
259 +        QuaternionTestCase.hpp, RectMatrixTestCase.cpp,
260 +        SquareMatrix3TestCase.cpp, Vector3TestCase.cpp,
261 +        Vector3TestCase.hpp, VectorTestCase.cpp, VectorTestCase.hpp: adding
262 +        more testing units
263 +
264 + 2004-10-18 12:07  tim
265 +
266 +        * src/: brains/SimSetup.hpp, io/FileReader.hpp, math/Euler3.cpp,
267 +        math/Euler3.hpp, math/Quaternion.hpp, math/SquareMatrix3.hpp,
268 +        math/Vector3.hpp, types/ShapeType.cpp, types/ShapeType.hpp,
269 +        utils/GenericFactory.hpp: fix some bugs in Quaternion class
270 +
271 + 2004-10-18 11:30  gezelter
272 +
273 +        * src/math/: RealSphericalHarmonic.cpp, RealSphericalHarmonic.hpp:
274 +        Your basic run of the mill real-valued versions of Y_l^m(\theta,
275 +        \phi)
276 +
277 + 2004-10-18 11:29  gezelter
278 +
279 +        * src/: math/Makefile, math/Matrix3x3d.hpp, math/Vector3.hpp,
280 +        types/Makefile, types/ShapeType.cpp, types/ShapeType.hpp,
281 +        utils/StringUtils.cpp, utils/StringUtils.hpp: Working on getting
282 +        Shapes into OOPSE
283 +
284 + 2004-10-18 10:21  gezelter
285 +
286 +        * src/types/: ShapeType.cpp, ShapeType.hpp: Added ShapeType
287 +
288 + 2004-10-18 00:23  tim
289 +
290 +        * test/math/VectorTestCase.hpp: adding  vector test case
291 +
292 + 2004-10-18 00:23  tim
293 +
294 +        * src/utils/GenericFactory.hpp: adding generic factory and vector
295 +        test case
296 +
297   2004-10-16 20:19  tim
298  
299          * src/math/: Quaternion.hpp, RectMatrix.hpp, SquareMatrix.hpp,
# Line 361 | Line 657
657  
658   2004-09-29 12:56  gezelter
659  
660 <        * make/: Make.conf.in, Makefile.in, _files/style.css: Working on
365 <        make stuff
660 >        * make/: Make.conf.in, Makefile.in: Working on make stuff
661  
662   2004-09-29 12:46  tim
663  
# Line 628 | Line 923
923          src/visitors/OtherVisitor.cpp, src/visitors/OtherVisitor.hpp,
924          src/visitors/RigidBodyVisitor.cpp,
925          src/visitors/RigidBodyVisitor.hpp, src/visitors/ZconsVisitor.cpp,
926 <        src/visitors/ZconsVisitor.hpp, make/Makefile,
632 <        make/_files/style.css, samples/Makefile.in,
926 >        src/visitors/ZconsVisitor.hpp, make/Makefile, samples/Makefile.in,
927          samples/metals/Au-Core-Ag-Shell_Nanoparticle.in,
928          samples/metals/Au-Core-Ag-Shell_Nanoparticle.md,
929          samples/metals/Au_bulk_FBD.md, samples/metals/Au_bulk_voter.md,
# Line 804 | Line 1098
1098          src/visitors/OtherVisitor.cpp, src/visitors/OtherVisitor.hpp,
1099          src/visitors/RigidBodyVisitor.cpp,
1100          src/visitors/RigidBodyVisitor.hpp, src/visitors/ZconsVisitor.cpp,
1101 <        src/visitors/ZconsVisitor.hpp, make/Makefile,
808 <        make/_files/style.css, samples/Makefile.in,
1101 >        src/visitors/ZconsVisitor.hpp, make/Makefile, samples/Makefile.in,
1102          samples/metals/Au-Core-Ag-Shell_Nanoparticle.in,
1103          samples/metals/Au-Core-Ag-Shell_Nanoparticle.md,
1104          samples/metals/Au_bulk_FBD.md, samples/metals/Au_bulk_voter.md,

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