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Comparing trunk/OOPSE-2.0/ChangeLog (file contents):
Revision 2205 by gezelter, Fri Apr 15 22:22:10 2005 UTC vs.
Revision 2246 by chrisfen, Sun May 29 21:13:23 2005 UTC

# Line 1 | Line 1
1 + 2005-05-28 19:16  tim
2 +
3 +        * src/visitors/: AtomNameVisitor.cpp, AtomNameVisitor.hpp: adding
4 +        AtomNameVisitor
5 +
6 + 2005-05-28 19:09  tim
7 +
8 +        * src/integrators/Integrator.cpp: dding resetIntegrator
9 +
10 + 2005-05-28 19:06  tim
11 +
12 +        * src/integrators/: Integrator.cpp, Integrator.hpp, NPT.cpp,
13 +        NPT.hpp, NPTi.cpp, NPTi.hpp, NVT.cpp, NVT.hpp,
14 +        VelocityVerletIntegrator.cpp, VelocityVerletIntegrator.hpp: adding
15 +        resetIntegrator
16 +
17 + 2005-05-27 16:11  tim
18 +
19 +        * src/applications/staticProps/: DensityPlot.cpp, DensityPlot.hpp,
20 +        Makefile, P2OrderParameter.cpp, SCDOrderParameter.cpp,
21 +        SCDOrderParameter.hpp, StaticProps.cpp, StaticProps.ggo,
22 +        StaticPropsCmd.c, StaticPropsCmd.h: adding DensityPlot into
23 +        StaticProps
24 +
25 + 2005-05-26 23:41  tim
26 +
27 +        * src/: applications/staticProps/Makefile,
28 +        applications/staticProps/P2OrderParameter.cpp,
29 +        applications/staticProps/P2OrderParameter.hpp,
30 +        applications/staticProps/StaticProps.cpp,
31 +        applications/staticProps/StaticProps.ggo,
32 +        applications/staticProps/StaticPropsCmd.c,
33 +        applications/staticProps/StaticPropsCmd.h, utils/StringUtils.cpp,
34 +        utils/StringUtils.hpp: adding SCDOrderParameter into StaticProps
35 +
36 + 2005-05-26 17:45  tim
37 +
38 +        * src/: applications/dump2Xyz/Dump2XYZ.cpp,
39 +        applications/dump2Xyz/Dump2XYZCmd.c,
40 +        applications/dump2Xyz/Dump2XYZCmd.h,
41 +        applications/staticProps/Makefile,
42 +        applications/staticProps/P2OrderParameter.cpp,
43 +        applications/staticProps/P2OrderParameter.hpp,
44 +        applications/staticProps/RadialDistrFunc.cpp,
45 +        applications/staticProps/RadialDistrFunc.hpp,
46 +        applications/staticProps/StaticAnalyser.hpp,
47 +        applications/staticProps/StaticProps.cpp,
48 +        applications/staticProps/StaticProps.ggo,
49 +        applications/staticProps/StaticPropsCmd.c,
50 +        applications/staticProps/StaticPropsCmd.h, visitors/Makefile,
51 +        visitors/OtherVisitor.cpp, visitors/OtherVisitor.hpp: adding
52 +        AtomNameVisitor to convert atom name to its base name;
53 +        wrappingvisitor now wrap back to the center of the mass; adding
54 +        P2OrderParameter into StaticProps
55 +
56 + 2005-05-22 16:36  chuckv
57 +
58 +        * samples/metals/nanorod/Au_nanoparticle_FCC.md,
59 +        src/applications/nanoRodBuilder/Geometry.cpp,
60 +        src/applications/nanoRodBuilder/GeometryBuilder.cpp,
61 +        src/applications/nanoRodBuilder/GeometryFactory.cpp,
62 +        src/applications/nanoRodBuilder/GeometryFactory.hpp,
63 +        src/applications/nanoRodBuilder/nanorodBuilder.cpp,
64 +        src/integrators/VelocityVerletIntegrator.cpp: Fix to print pressure
65 +        tensor.
66 +
67 + 2005-05-22 16:05  tim
68 +
69 +        * src/: brains/Stats.cpp, brains/Stats.hpp, brains/Thermo.cpp,
70 +        integrators/VelocityVerletIntegrator.cpp, io/Globals.cpp,
71 +        io/Globals.hpp, io/SectionParserManager.cpp: adding keyword
72 +        printPressureTensor
73 +
74 + 2005-05-20 14:27  tim
75 +
76 +        * src/integrators/NPrT.cpp: NPrT in progress
77 +
78 + 2005-05-20 11:01  tim
79 +
80 +        * src/: integrators/NPrT.cpp, io/Globals.cpp,
81 +        utils/OOPSEConstant.hpp: NPrT in progress
82 +
83 + 2005-05-19 16:31  tim
84 +
85 +        * src/: brains/Thermo.cpp, brains/Thermo.hpp, integrators/NPAT.cpp,
86 +        integrators/NPrT.cpp, integrators/NPrT.hpp, io/Globals.cpp,
87 +        io/Globals.hpp: NPAT is working
88 +
89 + 2005-05-19 10:49  tim
90 +
91 +        * src/: UseTheForce/DarkSide/LJ.F90, integrators/Makefile,
92 +        integrators/NPrT.cpp, io/Globals.cpp: fix bug in NPAT and NPrT
93 +
94 + 2005-05-18 23:28  tim
95 +
96 +        * src/: brains/Register.cpp, integrators/NPAT.cpp,
97 +        integrators/NPAT.hpp, integrators/NPrT.cpp, integrators/NPrT.hpp,
98 +        io/Globals.cpp, io/Globals.hpp: adding NPAT and NPrT integrators
99 +
100 + 2005-05-18 14:06  chrisfen
101 +
102 +        * forceFields/DUFF2.frc, src/UseTheForce/DarkSide/sticky.F90: just
103 +        some tap changes
104 +
105 + 2005-05-18 13:31  chrisfen
106 +
107 +        * src/UseTheForce/: doForces.F90, DarkSide/electrostatic.F90,
108 +        DarkSide/sticky.F90: Modifications to temper the dipolar strength
109 +        in the first solvation shell for tap
110 +
111 + 2005-05-18 07:35  chrisfen
112 +
113 +        * samples/water/tap/: tap.in, tap.md, water.md: added a tap example
114 +        for testing purposes
115 +
116 + 2005-05-17 17:35  chrisfen
117 +
118 +        * ChangeLog, forceFields/DUFF2.frc, samples/water/dimer/ssd.md,
119 +        samples/water/dimer/water.md, src/UseTheForce/DUFF.cpp,
120 +        src/UseTheForce/doForces.F90,
121 +        src/UseTheForce/DarkSide/electrostatic.F90,
122 +        src/UseTheForce/DarkSide/electrostatic_interface.F90,
123 +        src/UseTheForce/DarkSide/sticky.F90: Modifications to tap.  Also
124 +        correcting changes to the previous merge that were not caught
125 +
126 + 2005-05-16 23:20  chuckv
127 +
128 +        * src/types/: DirectionalAtomType.cpp, DirectionalAtomType.hpp:
129 +        Fixed merge issues between Kyle and Chris so OOPSE will actually
130 +        build.
131 +
132 + 2005-05-16 22:46  kdaily
133 +
134 +        * src/io/: GayBerneAtomTypesSectionParser.cpp,
135 +        GayBerneAtomTypesSectionParser.hpp, Makefile: help
136 +
137 + 2005-05-16 21:08  kdaily
138 +
139 +        * forceFields/DUFF2.frc, src/UseTheForce/doForces.F90,
140 +        src/UseTheForce/DarkSide/gb.F90, src/io/Makefile,
141 +        src/types/DirectionalAtomType.cpp,
142 +        src/types/DirectionalAtomType.hpp: added gb
143 +
144 + 2005-05-13 15:36  chrisfen
145 +
146 +        * forceFields/DUFF2.frc: Better tap
147 +
148 + 2005-05-12 14:43  chrisfen
149 +
150 +        * forceFields/DUFF2.frc, samples/water/dimer/ssd.in,
151 +        samples/water/dimer/ssd.md, src/UseTheForce/DarkSide/sticky.F90,
152 +        src/applications/dump2Xyz/Dump2XYZ.cpp,
153 +        src/visitors/AtomVisitor.hpp: Couple of changes for TAP water.
154 +        Need to parametrize.
155 +
156 + 2005-05-11 18:15  chuckv
157 +
158 +        * src/: io/ShapeAtomTypesSectionParser.cpp,
159 +        math/RealSphericalHarmonic.cpp, utils/CaseConversion.hpp: Fixed
160 +        build issues under ifc7.
161 +
162 + 2005-05-09 17:07  chuckv
163 +
164 +        * src/applications/nanoRodBuilder/Geometry.hpp: More geometry
165 +        builder changes.
166 +
167 + 2005-05-05 10:06  chrisfen
168 +
169 +        * forceFields/DUFF2.frc, samples/water/ssde/water.md: Changed SHED
170 +        to TAP
171 +
172 + 2005-05-05 09:47  chrisfen
173 +
174 +        * forceFields/DUFF2.frc, samples/water/ssde/ssde.md,
175 +        samples/water/ssde/water.md, src/UseTheForce/DUFF.cpp,
176 +        src/UseTheForce/doForces.F90, src/UseTheForce/DarkSide/Makefile,
177 +        src/UseTheForce/DarkSide/atype.F90,
178 +        src/UseTheForce/DarkSide/atype_interface.F90,
179 +        src/UseTheForce/DarkSide/simulation.F90,
180 +        src/UseTheForce/DarkSide/sticky.F90, src/brains/SimInfo.cpp,
181 +        src/brains/fSimulation.h, src/io/Makefile,
182 +        src/io/StickyAtomTypesSectionParser.cpp,
183 +        src/io/StickyPowerAtomTypesSectionParser.cpp,
184 +        src/io/StickyPowerAtomTypesSectionParser.hpp,
185 +        src/types/AtomType.cpp, src/types/AtomType.hpp,
186 +        src/types/AtomTypeProperties.h, src/types/DirectionalAtomType.cpp,
187 +        src/types/DirectionalAtomType.hpp: OOPSE setup for TAP water.  It's
188 +        not parametrized, but OOPSE will now let me run it...
189 +
190 + 2005-05-03 17:55  chuckv
191 +
192 +        * src/applications/nanoRodBuilder/: Geometry.cpp, Geometry.hpp,
193 +        GeometryCreator.hpp, GeometryFactory.cpp, GeometryFactory.hpp:
194 +        Adding support for generic geometry to nanorodbuilder.
195 +
196 + 2005-05-03 12:55  chuckv
197 +
198 +        * src/applications/nanoRodBuilder/: GeometryBuilder.cpp,
199 +        nanorodBuilder.cpp, nanorodBuilder.ggo, nanorodBuilderCmd.c,
200 +        nanorodBuilderCmd.h: More changes to nanoRodBuilder....
201 +
202 + 2005-04-29 14:16  gezelter
203 +
204 +        * make/Makefile.in: [no log message]
205 +
206 + 2005-04-29 11:26  chrisfen
207 +
208 +        * forceFields/DUFF2.frc, samples/water/spce/water.md,
209 +        samples/water/ssd/water.md, samples/water/ssd-ion/ssdCl.md,
210 +        samples/water/ssd-ion/water.md, samples/water/ssde/water.md,
211 +        samples/water/ssdrf/water.md, samples/water/tip3p_ice/water.md,
212 +        samples/water/tip4p/water.md: Added TIP4P-Ew
213 +
214 + 2005-04-27 19:24  chuckv
215 +
216 +        * src/applications/nanoRodBuilder/: GeometryBuilder.cpp,
217 +        GeometryBuilder.hpp, nanorodBuilder.cpp, nanorodBuilder.ggo,
218 +        nanorodBuilderCmd.c, nanorodBuilderCmd.h: Fixed issues with
219 +        nanoRodBuilder....
220 +
221 + 2005-04-27 15:13  chrisfen
222 +
223 +        * samples/shape/Shapes.frc, samples/shape/linear.shape,
224 +        src/UseTheForce/DarkSide/atype.F90,
225 +        src/UseTheForce/DarkSide/shapes.F90,
226 +        src/UseTheForce/DarkSide/shapes_interface.F90,
227 +        src/types/AtomType.cpp, src/types/ShapeAtomType.cpp: Got rid of
228 +        write statements and am closer to a working shapes
229 +
230 + 2005-04-22 16:57  chuckv
231 +
232 +        * src/utils/Predicate.hpp: Fixed gcc4 bug...
233 +
234 + 2005-04-22 16:52  tim
235 +
236 +        * src/utils/: CaseConversion.hpp, Predicate.hpp, Trim.cpp,
237 +        Trim.hpp: adding CharClassificationFunctor to fix the locale
238 +        problem  of c++
239 +
240 + 2005-04-21 09:12  chrisfen
241 +
242 +        * samples/shape/Shapes.frc, samples/shape/linear.in,
243 +        samples/shape/linear.md, src/UseTheForce/ForceField.hpp,
244 +        src/UseTheForce/ForceFieldFactory.hpp, src/UseTheForce/Makefile,
245 +        src/UseTheForce/SHAPES_FF.cpp, src/UseTheForce/SHAPES_FF.hpp,
246 +        src/UseTheForce/doForces.F90, src/UseTheForce/DarkSide/atype.F90,
247 +        src/UseTheForce/DarkSide/shapes.F90,
248 +        src/UseTheForce/DarkSide/shapes_interface.F90,
249 +        src/UseTheForce/DarkSide/shapes_interface.h,
250 +        src/brains/Register.cpp, src/brains/SimCreator.cpp,
251 +        src/io/Makefile, src/io/SectionParser.cpp,
252 +        src/io/SectionParser.hpp, src/io/SectionParserManager.cpp,
253 +        src/io/ShapeAtomTypesSectionParser.cpp,
254 +        src/io/ShapeAtomTypesSectionParser.hpp, src/math/Makefile,
255 +        src/types/AtomType.cpp, src/types/ShapeAtomType.cpp,
256 +        src/types/ShapeAtomType.hpp: Shapes is limping along with a array
257 +        bounds overwrite (I think...). At least the parser loads the
258 +        forcefield fine...
259 +
260 + 2005-04-18 10:44  chrisfen
261 +
262 +        * src/UseTheForce/Shapes_FF.cpp: axed because file causes havoc on
263 +        Mac (capitalization confusion of filenames)
264 +
265 + 2005-04-17 22:50  chrisfen
266 +
267 +        * src/: UseTheForce/SHAPES_FF.cpp, UseTheForce/SHAPES_FF.hpp,
268 +        UseTheForce/Shapes_FF.cpp,
269 +        io/DirectionalAtomTypesSectionParser.cpp,
270 +        io/ShapeAtomTypesSectionParser.cpp,
271 +        io/ShapeAtomTypesSectionParser.hpp: Working on the shapes parser...
272 +
273 + 2005-04-15 17:43  gezelter
274 +
275 +        * README: gmake in case people forget
276 +
277 + 2005-04-15 17:40  gezelter
278 +
279 +        * src/applications/oopse/oopse.cpp: fixed the spacing on the
280 +        banner.  Vanity.
281 +
282 + 2005-04-15 17:22  gezelter
283 +
284 +        * src/: config.h.in, applications/oopse/oopse.cpp: Version string
285 +        in banner (and version numbers in config.h)
286 +
287 + 2005-04-15 17:22  gezelter
288 +
289 +        * ChangeLog, LICENSE, README: Documentation changes
290 +
291   2005-04-15 17:03  gezelter
292  
293          * src/: UseTheForce/DUFF.cpp, UseTheForce/DUFF.hpp,
# Line 5454 | Line 5744
5744  
5745   2004-09-29 12:56  gezelter
5746  
5747 <        * make/: Make.conf.in, Makefile.in: Working on make stuff
5747 >        * make/: Make.conf.in, Makefile.in, _files/style.css: Working on
5748 >        make stuff
5749  
5750   2004-09-29 12:46  tim
5751  
# Line 5720 | Line 6011
6011          src/visitors/OtherVisitor.cpp, src/visitors/OtherVisitor.hpp,
6012          src/visitors/RigidBodyVisitor.cpp,
6013          src/visitors/RigidBodyVisitor.hpp, src/visitors/ZconsVisitor.cpp,
6014 <        src/visitors/ZconsVisitor.hpp, make/Makefile, samples/Makefile.in,
6014 >        src/visitors/ZconsVisitor.hpp, make/Makefile,
6015 >        make/_files/style.css, samples/Makefile.in,
6016          samples/metals/Au-Core-Ag-Shell_Nanoparticle.in,
6017          samples/metals/Au-Core-Ag-Shell_Nanoparticle.md,
6018          samples/metals/Au_bulk_FBD.md, samples/metals/Au_bulk_voter.md,
# Line 5895 | Line 6187
6187          src/visitors/OtherVisitor.cpp, src/visitors/OtherVisitor.hpp,
6188          src/visitors/RigidBodyVisitor.cpp,
6189          src/visitors/RigidBodyVisitor.hpp, src/visitors/ZconsVisitor.cpp,
6190 <        src/visitors/ZconsVisitor.hpp, make/Makefile, samples/Makefile.in,
6190 >        src/visitors/ZconsVisitor.hpp, make/Makefile,
6191 >        make/_files/style.css, samples/Makefile.in,
6192          samples/metals/Au-Core-Ag-Shell_Nanoparticle.in,
6193          samples/metals/Au-Core-Ag-Shell_Nanoparticle.md,
6194          samples/metals/Au_bulk_FBD.md, samples/metals/Au_bulk_voter.md,

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