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Comparing trunk/OOPSE-2.0/make/Makefile.in (file contents):
Revision 1522 by gezelter, Mon Oct 4 16:24:39 2004 UTC vs.
Revision 2555 by gezelter, Thu Jan 12 20:01:48 2006 UTC

# Line 34 | Line 34 | IS_UNIX=1
34   #
35   #---------------------------------------------------------------------------
36   IS_UNIX=1
37 < #packages to be made
38 < Packages = \
37 >
38 > #packages containing libraries
39 > PackageLibs = \
40          utils \
41 +        visitors \
42          math \
43          types \
44          primitives \
43        visitors \
45          UseTheForce/DarkSide \
46          UseTheForce \
47          brains \
48          io \
49 <        integrators \
49 <        minimizers \
49 >        integrators\
50          constraints \
51 <        profiling \
51 >        minimizers \
52 >        selection \
53          restraints \
54 +        lattice \
55 +        openbabel\
56 +        antlr\
57 +        mdParser
58 + #packages containing applications
59 + Applications = \
60          applications/oopse \
61          applications/dump2Xyz \
62 <        applications/simpleBuilder \
62 >        applications/staticProps \
63 >        applications/dynamicProps \
64 >        applications/simpleBuilder\
65 >        applications/nanoRodBuilder \
66 >        applications/atom2mdin
67  
68 < #packages contain libraries
69 < PackageLibs = \
70 <        utils \
71 <        math \
72 <        types \
73 <        primitives \
74 <        visitors \
75 <        UseTheForce/DarkSide \
76 <        UseTheForce \
77 <        brains \
78 <        io \
79 <        integrators \
80 <        minimizers \
81 <        constraints \
82 <        profiling \
83 <        restraints \
68 > Samples = \
69 >        samples/alkane \
70 >        samples/argon \
71 >        samples/cutoff \
72 >        samples/dipole \
73 >        samples/gbljtest \
74 >        samples/lipid \
75 >        samples/metals/EAM \
76 >        samples/metals/EAM/nanoparticle \
77 >        samples/metals/EAM/nanorod \
78 >        samples/metals/Sutton-Chen \
79 >        samples/minimizer \
80 >        samples/shape \
81 >        samples/thermoIntegration/liquid \
82 >        samples/thermoIntegration/solid \
83 >        samples/water/dimer \
84 >        samples/water/spce \
85 >        samples/water/ssd \
86 >        samples/water/ssde \
87 >        samples/water/ssdrf \
88 >        samples/water/ssd-ion \
89 >        samples/water/tip3p_ice \
90 >        samples/water/tip4p \
91 >        samples/zcons
92  
93   IncludeDirs = \
94 <        @SPRNG_INC_DIR@ \
95 <        @MPI_INC_DIR@
94 >        @CGAL_INC_DIR@ \
95 >        @MPI_INC_DIR@
96  
97   LibraryDirs = \
98 <        @SPRNG_LIB_DIR@ \
98 >        @CGAL_LIB_DIR@ \
99          @MPI_LIB_DIR@
100  
101   Libraries = \
102 <        @SPRNG_LIB@ \
103 <        @MPI_LIB@
102 >        @LIBS@ \
103 >        @CGAL_LIBS@ \
104 >        @MPI_LIB@ \
105 >        @MPI_F90_LIB@
106  
86 LinkOptions = \
87        @F90LIBS@
88
107   OopseHome       = @OOPSE_HOME@
108 < ForceParamDir   = @OOPSE_HOME@/share/forceFields/
109 < SampleSimDir    = @OOPSE_HOME@/share/samples/
108 > ForceParamDir   = $(OopseHome)/share/forceFields
109 > SampleSimDir    = $(OopseHome)/share/samples
110 > InstallBinDir   = $(OopseHome)/bin
111 > DocDir          = $(OopseHome)/doc
112   FrcDeclare      = -DFRC_PATH="$(ForceParamDir)"
113 + F90Declare      = -D__FORTRAN90
114   ParallelDeclare = -DIS_MPI
115 + UseMPI          = @USE_MPI@
116 + ModuleCase      = @F90_MODULE_NAMES@
117 + ModSuffix       = @MOD@
118 + LinkOptions = \
119 +        @FCLIBS@
120  
121 + ParallelLinkOptions = \
122 +        @FCLIBS@
123  
124 +
125   #---------------------------------------------------------------------------
126   #
127   #  Directories
# Line 104 | Line 133 | BinDir            = $(DEV_ROOT)/bin
133   ParallelTargetDir = $(DEV_ROOT)/MPIobj
134   LibDir            = $(DEV_ROOT)/lib
135   MakeDir           = $(DEV_ROOT)/make
136 + MainMakefile      = $(MakeDir)/Makefile
137   BinDir            = $(DEV_ROOT)/bin
138   DocsDir           = $(DEV_ROOT)/docs
139   CurrentDir        = $(CURDIR)
140 + CombinedStaticLib = $(LibDir)/libOOPSE.a
141 + CombinedParallelStaticLib = $(LibDir)/libOOPSE_MPI.a
142  
143   ifdef Source
144   #get the relative path of current package to source directory
145   # /home/maul/gezelter/src/code/src/UseTheForce/Darkside --> UseTheForce/Darkside
146   #Package          = $(shell echo $(CurrentDir) | sed -e 's/^.*\/src\/\(.*\)/\1/g')
147   #use shell script to get the absolute path and then rip it off from $(CurrentDir)
148 < Package          = $(subst $(shell cd $(SourceDir); pwd)/,,$(CurrentDir))
148 > #Package          = $(subst $(shell cd $(SourceDir); pwd)/,,$(CurrentDir))
149 > # REMINDER: We are now using the Package line in each subdir makefile.
150 > # This avoids the strange path problem and the subshell
151  
152   PackageList              = $(Package)
153   PackageSourceDir         = $(SourceDir)/$(Package)
# Line 121 | Line 155 | PackageList              = $(Packages) $(JavaPackages)
155   PackageParallelTargetDir = $(ParallelTargetDir)
156   JavaMainClass            = $(subst /,.,$(Package)).$(Main)
157   else
158 < PackageList              = $(Packages) $(JavaPackages)
158 > PackageList              = $(PackageLibs) $(JavaPackages) $(Applications)
159   endif
160  
161   PackageListLoop          = $(patsubst %,$(SourceDir)/%/.loop,$(PackageList))
# Line 172 | Line 206 | ObjectFiles            = $(CFiles:%.c=        $(Packag
206   JniHeaders             = $(JniSource:%.java=  $(PackageSourceDir)/%.h)
207   ObjectFiles            = $(CFiles:%.c=        $(PackageTargetDir)/%.o)\
208                           $(CppFiles:%.cpp=    $(PackageTargetDir)/%.o)\
209 <                                     $(FortranFiles:%.f=  $(PackageTargetDir)/%.o)\
210 <                                     $(F90Files:%.F90=    $(PackageTargetDir)/%.o)\
211 <                                     $(LexFiles:%.l=      $(PackageTargetDir)/%.o)\
212 <                                     $(YaccFiles:%.y=     $(PackageTargetDir)/%.o)
209 >                         $(FortranFiles:%.f=  $(PackageTargetDir)/%.o)\
210 >                         $(F90Files:%.F90=    $(PackageTargetDir)/%.o)\
211 >                         $(LexFiles:%.l=      $(PackageTargetDir)/%.o)\
212 >                         $(YaccFiles:%.y=     $(PackageTargetDir)/%.o)
213   ParallelObjectFiles    = $(CFiles:%.c=        $(PackageParallelTargetDir)/%.o)\
214 <                                     $(CppFiles:%.cpp=    $(PackageParallelTargetDir)/%.o)\
215 <                                     $(FortranFiles:%.f=  $(PackageParallelTargetDir)/%.o)\
216 <                                     $(F90Files:%.F90=    $(PackageParallelTargetDir)/%.o)\
217 <                                     $(LexFiles:%.l=      $(PackageParallelTargetDir)/%.o)\
218 <                                     $(YaccFiles:%.y=     $(PackageParallelTargetDir)/%.o)
214 >                         $(CppFiles:%.cpp=    $(PackageParallelTargetDir)/%.o)\
215 >                         $(FortranFiles:%.f=  $(PackageParallelTargetDir)/%.o)\
216 >                         $(F90Files:%.F90=    $(PackageParallelTargetDir)/%.o)\
217 >                         $(LexFiles:%.l=      $(PackageParallelTargetDir)/%.o)\
218 >                         $(YaccFiles:%.y=     $(PackageParallelTargetDir)/%.o)
219  
220   DerivedSource          = $(YaccFiles:%.y=    %.h) \
221 <                               $(YaccFiles:%.y=    %.c) \
222 <                               $(LexFiles:%.l=     %.c)
221 >                         $(YaccFiles:%.y=    %.c) \
222 >                         $(LexFiles:%.l=     %.c)
223  
224   DerivedCFiles          = $(YaccFiles:%.y=    %.c) \
225 <                               $(LexFiles:%.l=     %.c)
225 >                         $(LexFiles:%.l=     %.c)
226  
227   OtherTargetFiles       = $(OtherSourceFiles:%=$(PackageTargetDir)/%)
228 +
229 + ###########################################################################
230 + #
231 + # Figure out the names of the module files based on some work done by
232 + # configure.  The tr function below is from John Graham-Cumming
233 + # (http://www.jgc.org).
234 + #
235 + # The tr function.   Has three arguments:
236 + #
237 + # $1   The list of characters to translate from
238 + # $2   The list of characters to translate to
239 + # $3   The text to translate
240 + #
241 + # For example, $(call tr,A B C,1 2 3,CAPITAL) becomes 21PIT1L.
242 +
243 + tr = $(eval __t := $3)                                                    \
244 +     $(foreach c,                                                         \
245 +         $(join $(addsuffix :,$1),$2),                                    \
246 +         $(eval __t :=                                                    \
247 +             $(subst $(word 1,$(subst :, ,$c)),$(word 2,$(subst :, ,$c)), \
248 +                 $(__t))))$(__t)
249  
250 + # Common character classes for use with the tr function.  Each of
251 + # these is actually a variable declaration and must be wrapped with
252 + # $() or ${} to be used.
253 +
254 + [A-Z] := A B C D E F G H I J K L M N O P Q R S T U V W X Y Z #
255 + [a-z] := a b c d e f g h i j k l m n o p q r s t u v w x y z #
256 + [0-9] := 0 1 2 3 4 5 6 7 8 9 #
257 + [A-F] := A B C D E F #
258 +
259 + # Figure out whether we have $(eval) or not (GNU Make 3.80 and above)
260 + # if we do not then we need to use the shell version of tr, and not the
261 + # faster tr function above:
262 +
263 + __have_eval := $(false)
264 + __ignore := $(eval __have_eval := $(true))
265 +
266 + ifndef __have_eval
267 +  uc = $(shell echo $1 | tr "a-z" "A-Z")
268 +  lc = $(shell echo $1 | tr "A-Z" "a-z")
269 + else
270 +  uc = $(call tr,$([a-z]),$([A-Z]),$1)
271 +  lc = $(call tr,$([A-Z]),$([a-z]),$1)
272 + endif
273 +
274 + # OK, now we can actually use these functions to figure out the names
275 + # of the module files:
276 +
277 + ifneq "$(words $(Modules))" "0"
278 + ifeq "$(ModuleCase)" "UPPER"
279 +  MODULES = $(call uc,$(Modules))
280 + else
281 +  ifeq "$(ModuleCase)" "lower"
282 +    MODULES = $(call lc,$(Modules))
283 +  else
284 +    MODULES = $(Modules)
285 +  endif
286 + endif
287 +  ModuleFiles = $(MODULES:%= $(PackageTargetDir)/%.$(ModSuffix))
288 +  ParallelModuleFiles = $(MODULES:%= $(PackageParallelTargetDir)/%.$(ModSuffix))
289 + endif
290 + #
291 + ###########################################################################
292 +
293   ThirdPartyJarsTmp = $(patsubst %,$(LibDir)/%,$(JavaLibraries))
294   ThirdPartyJars    = $(subst $(Space),$(X),$(ThirdPartyJarsTmp))
295  
# Line 203 | Line 301 | ifneq  "$(words $(ObjectFiles) $(ParallelObjectFiles))
301   #if Main is defined, do not build library. It may not be true sometimes
302   ifneq  "$(words $(ObjectFiles) $(ParallelObjectFiles))" "0"
303    DependencyFile    = $(PackageSourceDir)/Makedepend
304 <  ifneq "$(Main)" ""
304 >  ifneq "$(words $(Main))" "0"
305      Executable             = $(BinDir)/$(Main)
306 <    ParallelExecutable     = $(BinDir)/$(Main)_MPI
306 >    ifeq "$(BuiltParallelExe)" "1"
307 >      ParallelExecutable     = $(BinDir)/$(Main)_MPI
308 >    endif
309    else
310 <    SharedLibrary          = $(LibDir)/lib$(subst /,,$(patsubst %,oopse_%,$(Package))).so
311 <    StaticLibrary          = $(LibDir)/lib$(subst /,,$(patsubst %,oopse_%,$(Package))).a
310 >    SharedLibrary          = $(LibDir)/lib$(subst /,,$(patsubst %,oopse_%,$(Package)))_UP.so
311 >    StaticLibrary          = $(LibDir)/lib$(subst /,,$(patsubst %,oopse_%,$(Package)))_UP.a
312      ParallelSharedLibrary  = $(LibDir)/lib$(subst /,,$(patsubst %,oopse_%,$(Package)))_MPI.so
313      ParallelStaticLibrary  = $(LibDir)/lib$(subst /,,$(patsubst %,oopse_%,$(Package)))_MPI.a
314    endif
315   endif
316 +
317   #
318   # Misc
319   #
# Line 220 | Line 321 | LocalLibs        = $(subst /,,$(patsubst %, oopse_%, $
321   JavaPackageNames = $(subst /,.,$(JavaPackages))
322   IncludePath      = -I$(SourceDir) $(IncludeDirs:%=-I%)
323   LibDirs          = -L$(LibDir)    $(LibraryDirs:%=-L%)
324 < LocalLibs        = $(subst /,,$(patsubst %, oopse_%, $(PackageLibs)))
324 > LocalLibs        = $(subst /,,$(patsubst %, oopse_%_UP, $(PackageLibs)))
325   ParallelLocalLibs= $(subst /,,$(patsubst %, oopse_%_MPI, $(PackageLibs)))
326   LibList          = $(LocalLibs:%=-l%) $(Libraries)
327 < ParallelLibList  = $(LocalLibs:%=-l%) $(Libraries)
327 > LibNames         = $(LocalLibs:%=$(LibDir)/lib%.a)
328 > ParallelLibList  = $(ParallelLocalLibs:%=-l%) $(Libraries)
329 > ParallelLibNames = $(ParallelLocalLibs:%=$(LibDir)/lib%.a)
330  
331  
332   #---------------------------------------------------------------------------
# Line 232 | Line 335 | Move                   = mv
335   #
336   #---------------------------------------------------------------------------
337   Print                  = @echo
338 < Move                   = mv
338 > Move                   = mv -f
339   Copy                   = cp
340   CCompiler              = @CC@
341   CppCompiler            = @CXX@
342   Linker                 = @CXX@
343   MakeDepend             = makedepend
344 < Install                = @INSTALL@
344 > LN_S                   = @LN_S@
345 > INSTALL                = @INSTALL@
346 > EGREP                  = @EGREP@
347   InstallProgram         = @INSTALL_PROGRAM@
348 + InstallScript          = @INSTALL_SCRIPT@
349   InstallData            = @INSTALL_DATA@
350 < MakeDir                = @MKINSTALLDIRS@
351 < Delete                 = rm -fr
350 > MkDir                  = @MKINSTALLDIRS@
351 > Delete                 = rm -f
352   StaticArchiver         = @AR@
353   DynamicArchiver        = @CC@
354   FortranCompiler        = @FC@
249 F90Compiler            = @F90@
355   JavaCompiler           = $(JAVA_HOME)/bin/javac
356   JavaArchiver           = $(JAVA_HOME)/bin/jar
357   JarSigner              = $(JAVA_HOME)/bin/jarsigner
# Line 259 | Line 364 | Lex                    = @LEX@
364   List                   = cat
365   Yacc                   = @YACC@
366   Lex                    = @LEX@
367 + Ranlib                 = @RANLIB@
368 + Doxygen                = @DOXYGEN@
369  
263
370   MakeOptions            = -k
371   MakeDependOptions      =
372   StaticArchiverOptions  = rc
# Line 269 | Line 375 | COptions               = $(FrcDeclare)
375   JniOptions             =
376   RmiOptions             = -d $(TargetDir) -classpath $(ClassPath) \
377                           -sourcepath $(SourceDir)
378 < COptions               = $(FrcDeclare)
379 < CParallelOptions       = $(FrcDeclare) $(ParallelDeclare)
380 < CppOptions             = $(FrcDeclare)
381 < CppParallelOptions     = $(FrcDeclare) $(ParallelDeclare)
382 < FortranOptions         =
383 < F90Options             =  @PREPFLAG@ @F90FLAGS@ @MODDIRFLAG@$(SourceDir) -module $(TargetDir)
278 < F90ParallelOptions     =  @PREPFLAG@ @F90FLAGS@ @MODDIRFLAG@$(SourceDir) -module $(TargetDir)  @PREPDEFFLAG@$(ParallelDeclare)
378 > COptions               = $(FrcDeclare) @CFLAGS@
379 > CParallelOptions       = $(FrcDeclare) $(ParallelDeclare) @CFLAGS@
380 > CppOptions             = $(FrcDeclare) @CXXFLAGS@
381 > CppParallelOptions     = $(FrcDeclare) $(ParallelDeclare) @CXXFLAGS@
382 > FortranOptions         =  @FCFLAGS@ @MODDIRFLAG@$(SourceDir) @MODDIRFLAG@$(TargetDir) @FCFLAGS_SRCEXT@
383 > FortranParallelOptions =  @FCFLAGS@ @MODDIRFLAG@$(SourceDir) @MODDIRFLAG@$(ParallelTargetDir) @PREPDEFFLAG@$(ParallelDeclar) @FCFLAGS_SRCEXT@
384   JavaCompilerOptions    = -d $(TargetDir) -classpath $(ClassPath) \
385                           -sourcepath $(SourceDir) -deprecation
386   JavaRunOptions         = -classpath $(ClassPath)
# Line 301 | Line 406 | Space                  = $(Empty) $(Empty)
406  
407   #---------------------------------------------------------------------------
408   #
409 + #  Install
410 + #
411 + #---------------------------------------------------------------------------
412 +
413 + ifneq "$(words $(SampleFiles))" "0"
414 +  MySample                 = $(subst $(shell cd $(DEV_ROOT)/samples; pwd)/,,$(CurrentDir))
415 +  MyInstallDir             = $(SampleSimDir)/$(MySample)
416 +  InstallFiles             = $(SampleFiles)
417 +  InstallCommand           = $(InstallData)
418 + endif
419 +
420 + ifneq "$(words $(Main))" "0"
421 +  MyInstallDir             = $(InstallBinDir)
422 +  ifeq "$(UseMPI)" "yes"
423 +    InstallFiles             = $(Executable) $(ParallelExecutable)
424 +  else
425 +    InstallFiles             = $(Executable)
426 +  endif
427 +  InstallCommand           = $(InstallProgram)
428 +  ifneq "$(words $(LinkTargets))" "0"
429 +    MyLinkSource = $(patsubst %, $(MyInstallDir)/%,$(Main))
430 +    MyLinkTargets = $(patsubst %, $(MyInstallDir)/%,$(LinkTargets))
431 +  endif
432 + endif
433 +
434 + ifneq "$(words $(ForcefieldFiles))" "0"
435 +  MyInstallDir             = $(ForceParamDir)
436 +  InstallFiles             = $(ForcefieldFiles)
437 +  InstallCommand           = $(InstallData)
438 + endif
439 +
440 + ifneq "$(words $(InstallFiles))" "0"
441 +  InstallList            =
442 + else
443 +  InstallList            = $(patsubst %,$(DEV_ROOT)/%,$(Samples)) $(DEV_ROOT)/forceFields $(patsubst %, $(SourceDir)/%,$(Applications))
444 + endif
445 +
446 + InstallListLoop          = $(patsubst %,$(SourceDir)/%/.install,$(PackageList))  $(patsubst %,%/.install,$(InstallList))
447 +
448 +
449 +
450 + #---------------------------------------------------------------------------
451 + #
452   # Rules
453   #
454   #---------------------------------------------------------------------------
# Line 311 | Line 459 | $(PackageTargetDir) :
459  
460   # Create target directory
461   $(PackageTargetDir) :
462 <        $(MakeDir) $@
462 >        $(MkDir) $@
463 >
464 > $(BinDir) :
465 >        $(MkDir) $@
466  
467   # .c -> .o
468 < $(PackageTargetDir)/%.o : %.c
468 > $(PackageTargetDir)/%.o : %.c $(MainMakefile)
469          $(Print) $@
470          $(CCompiler) $(COptions) -c $(IncludePath) $< -o $@
471  
472 < %.o : %.c
472 > $(PackageParallelTargetDir)/%.o : %.c $(MainMakefile)
473 >        $(Print) $@
474 >        $(CCompiler) $(CParallelOptions) -c $(IncludePath) $< -o $@
475 >
476 > ifeq "$(UseMPI)" "yes"
477 > %.o : %.c $(MainMakefile)
478          $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
479 +        $(MAKE) $(MakeOptions) $(PackageParallelTargetDir)/$@
480 + else
481 + %.o : %.c $(MainMakefile)
482 +        $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
483 + endif
484  
485   # .cpp -> .o
486 < $(PackageTargetDir)/%.o : %.cpp
486 > $(PackageTargetDir)/%.o : %.cpp $(MainMakefile)
487          $(CppCompiler) $(CppOptions) -c $(IncludePath) $< -o $@
488  
489 < %.o : %.cpp
489 > $(PackageParallelTargetDir)/%.o : %.cpp $(MainMakefile)
490 >        $(CppCompiler) $(CppParallelOptions) -c $(IncludePath) $< -o $@
491 >
492 > ifeq "$(UseMPI)" "yes"
493 > %.o : %.cpp $(MainMakefile)
494          $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
495 +        $(MAKE) $(MakeOptions) $(PackageParallelTargetDir)/$@
496 + else
497 + %.o : %.cpp $(MainMakefile)
498 +        $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
499 + endif
500  
501   # .f -> .o
502 < $(PackageTargetDir)/%.o : %.f
502 > $(PackageTargetDir)/%.o : %.f $(MainMakefile)
503          $(FortranCompiler) $(FortranOptions) -c $< -o $@
504  
505 < %.o : %.f
505 > $(PackageParallelTargetDir)/%.o : %.f $(MainMakefile)
506 >        $(FortranCompiler) $(FortranParallelOptions) -c $< -o $@
507 >
508 > ifeq "$(UseMPI)" "yes"
509 > %.o : %.f $(MainMakefile)
510          $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
511 +        $(MAKE) $(MakeOptions) $(PackageParallelTargetDir)/$@
512 + else
513 + %.o : %.f $(MainMakefile)
514 +        $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
515 + endif
516  
517   # .F90 -> .o
518 < $(PackageTargetDir)/%.o : %.F90
519 <        $(F90Compiler) $(F90Options) -c $< -o $@
518 > $(PackageTargetDir)/%.o : %.F90 $(MainMakefile)
519 >        $(FortranCompiler) $(FortranOptions) $(IncludePath) -c $< -o $@
520 >        if test -n "`ls *.$(ModSuffix)`"; then \
521 >          $(Move) `ls *.$(ModSuffix)` $(PackageTargetDir);\
522 >        fi
523  
524 < %.o : %.F90
524 > $(PackageParallelTargetDir)/%.o : %.F90 $(MainMakefile)
525 >        $(FortranCompiler) $(FortranParallelOptions) $(IncludePath) -c $< -o $@
526 >        if test -n "`ls *.$(ModSuffix)`"; then \
527 >          $(Move) "`ls *.$(ModSuffix)`" $(PackageParallelTargetDir);\
528 >        fi
529 >
530 > ifeq "$(UseMPI)" "yes"
531 > %.o : %.F90 $(MainMakefile)
532          $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
533 +        if test -n "`ls *.$(ModSuffix)`"; then\
534 +          $(Move) "`ls *.$(ModSuffix)`" $(PackageTargetDir);\
535 +        fi
536  
537 +        $(MAKE) $(MakeOptions) $(PackageParallelTargetDir)/$@
538 +        if test -n "`ls *.$(ModSuffix)`"; then\
539 +          $(Move) "`ls *.$(ModSuffix)`" $(PackageTargetDir);\
540 +        fi
541 +
542 + else
543 + %.o : %.F90 $(MainMakefile)
544 +        $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
545 +        if test -n "`ls *.$(ModSuffix)`"; then\
546 +          $(Move) "`ls *.$(ModSuffix)`" $(PackageTargetDir);\
547 +        fi
548 + endif
549 +
550 +
551   # .java -> .class
552   $(PackageTargetDir)/%.class : $(PackageSourceDir)/%.java
553          $(JavaCompiler) $(JavaCompilerOptions) $<
# Line 375 | Line 581 | $(LibDir)/%.a : $(ObjectFiles)
581          @$(Lex) -o$@ $?
582  
583   # .o -> .a
584 < $(LibDir)/%.a : $(ObjectFiles)
584 >
585 > $(LibDir)/%_UP.a : $(ObjectFiles)
586          $(StaticArchiver) $(StaticArchiverOptions) $@ $(ObjectFiles)
587 +        @touch $(LibDir)/.stamp_UP
588  
589 < %.a : $(ObjectFiles)
382 <        $(MAKE) $(MakeOptions) $(LibDir)/$@
383 <
384 < $(LibDir)/%_MPI.a : $(ParallelObjectFiles)
589 > $(LibDir)/%_MPI.a: $(ParallelObjectFiles)
590          $(StaticArchiver) $(StaticArchiverOptions) $@ $(ParallelObjectFiles)
591 +        @touch $(LibDir)/.stamp_MPI
592  
593 + %_UP.a : $(ObjectFiles)
594 +        $(MAKE) $(MakeOptions) $(LibDir)/$@
595 +
596   %_MPI.a : $(ParallelObjectFiles)
597          $(MAKE) $(MakeOptions) $(LibDir)/$@
598  
599   # .o -> .so
600 < $(LibDir)/%.so : $(ObjectFiles)
600 > $(LibDir)/%_UP.so : $(ObjectFiles)
601          $(DynamicArchiver) $(ObjectFiles) $(DynamicArchiverOptions) -o $@
602  
394 %.so : $(ObjectFiles)
395        $(MAKE) $(MakeOptions) $(LibDir)/$@
396
603   $(LibDir)/%_MPI.so : $(ParallelObjectFiles)
604          $(DynamicArchiver) $(ParallelObjectFiles) $(DynamicArchiverOptions) -o $@
605  
606 + %_UP.so : $(ObjectFiles)
607 +        $(MAKE) $(MakeOptions) $(LibDir)/$@
608 +
609   %_MPI.so : $(ParallelObjectFiles)
610          $(MAKE) $(MakeOptions) $(LibDir)/$@
611  
# Line 432 | Line 641 | $(PackageTargetDir)/%_Skel.class : $(PackageTargetDir)
641   %_Skel.class : %.class
642          $(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
643  
644 + document :
645 +        $(Print) Generate Documentation for OOPSE-2.0
646 +        @cd $(DEV_ROOT)/src    
647 +        $(Doxygen) $(DEV_ROOT)/make/Doxyfile
648 +
649 + #GUN make funtions to merge the libraries
650 + find_objs = $(shell $(StaticArchiver) -t $(1) | $(EGREP) -v "SYMDEF")
651 + extract_objs = $(shell $(StaticArchiver) -x $(1) $(call find_objs, $(1)))
652 + create_archive = $(shell  $(StaticArchiver) $(StaticArchiverOptions) $(2) $(call find_objs, $(1)))
653 + remove_objs = $(shell $(Delete) $(call find_objs, $(1)))
654 + do_create = $(call extract_objs,$(1))$(call create_archive,$(1),$(2))$(call remove_objs,$(1))  
655 + do_link = $(shell $(LN_S) $(1) $(2))
656 + all_objs = $(foreach thisLib,$(LibNames), $(call find_objs, $(thisLib)))
657 + all_parallel_objs = $(foreach thisLib,$(ParallelLibNames), $(call find_objs, $(thisLib)))
658 + all_lib_objs = $(patsubst %,$(TargetDir)/%,$(call all_objs))
659 + all_lib_parallel_objs = $(patsubst %,$(ParallelTargetDir)/%,$(call all_parallel_objs))
660 +
661 + $(CombinedStaticLib) : $(LibDir)/.stamp_UP
662 +        $(Print) creating $@            
663 +        $(StaticArchiver) $(StaticArchiverOptions) $@ $(call all_lib_objs)
664 +        $(Ranlib) $(CombinedStaticLib)
665 +
666 + $(CombinedParallelStaticLib) : $(LibDir)/.stamp_MPI
667 +        $(Print) creating $@
668 +        $(StaticArchiver) $(StaticArchiverOptions) $@ $(call all_lib_parallel_objs)
669 +        $(Ranlib) $(CombinedParallelStaticLib)
670 +
671   # Executable
672 < $(Executable) : $(ObjectFiles)
673 <        $(Linker) $(LinkOptions) $(LibDirs) $(LibList) $(ObjectFiles) -o $@
672 > $(Executable) : $(CombinedStaticLib) $(ObjectFiles) $(BinDir)
673 >        @echo $(Executable) : $(CombinedStaticLib) $(ObjectFiles) $(BinDir)
674 >        $(Linker) $(ObjectFiles) $(CombinedStaticLib) $(LinkOptions) $(LibDirs) $(Libraries) -o $@
675  
676 < $(ParallelExecutable) : $(ParallelObjectFiles)
677 <        $(Linker) $(LinkOptions) $(LibDirs) $(ParallelLibList) $(ParallelObjectFiles) -o $@
676 > $(ParallelExecutable) : $(CombinedParallelStaticLib) $(ParallelObjectFiles) $(BinDir)
677 >        $(Linker) $(ParallelObjectFiles) $(CombinedParallelStaticLib) $(ParallelLinkOptions) $(LibDirs) $(Libraries) -o $@
678  
679   # Anything else is just copied from source to target
680   $(PackageTargetDir)/% : $(PackageSourceDir)/%
# Line 450 | Line 687 | _buildall : \
687  
688   _all : _buildall
689  
690 + _buildall :
691 + ifeq "$(UseMPI)" "yes"
692   _buildall : \
693          $(DependencyFile) \
694          $(PackageTargetDir) \
695          $(ObjectFiles) \
696 +        $(ParallelObjectFiles) \
697          $(JavaClassFiles) \
698          $(RmiStubFiles) \
699          $(RmiSkeletonFiles) \
700          $(OtherTargetFiles) \
461        $(SharedLibrary) \
701          $(StaticLibrary) \
702 +        $(ParallelStaticLibrary) \
703          $(JarFile) \
704 <        $(Executable)
705 <        
704 >        $(Executable) \
705 >        $(ParallelExecutable)
706 > else
707 > _buildall : \
708 >        $(DependencyFile) \
709 >        $(PackageTargetDir) \
710 >        $(ObjectFiles) \
711 >        $(JavaClassFiles) \
712 >        $(RmiStubFiles) \
713 >        $(RmiSkeletonFiles) \
714 >        $(OtherTargetFiles) \
715 >        $(StaticLibrary) \
716 >        $(JarFile) \
717 >        $(Executable)
718 > endif
719  
720 + echo : $(PackageListLoop)
721 +        $(Print) Done echo.
722 +
723 + _echoall :
724 +        $(Print) $(Modules)
725 +
726   # make clean
727   clean : $(PackageListLoop)
728          $(Print) Done clean.    
729  
730   _cleanall :
731 <        $(Delete) $(ObjectFiles) $(ParallelObjectFiles)
731 >        $(Delete) \
732 >                $(ObjectFiles) \
733 >                $(ModuleFiles) \
734 >                $(ParallelObjectFiles) \
735 >                $(ParallelModuleFiles) \
736 >                $(JarFile) \
737 >                $(SharedLibrary) \
738 >                $(StaticLibrary) \
739 >                $(ParallelSharedLibrary) \
740 >                $(ParallelStaticLibrary) \
741 >                $(CombinedStaticLib) \
742 >                $(CombinedParallelStaticLib)
743  
744   # make distclean
745   distclean : $(PackageListLoop)
746          $(Print) Done clean.    
747  
748 < _distcleanall :
749 <        $(Delete) $(ObjectFiles) \
480 <                  $(ParallelObjectFiles) \
481 <                  $(JarFile) \
482 <                  $(SharedLibrary) \
483 <                  $(StaticLibrary) \
484 <                  $(ParallelSharedLibrary) \
485 <                  $(ParallelStaticLibrary) \
486 <                  $(Executable) \
748 > _distcleanall : _cleanall
749 >        $(Delete) $(Executable) \
750                    $(ParallelExecutable) \
751 <                  $(DependencyFile)
751 >                  $(DependencyFile)
752  
490
753   # make depend
754   depend : $(PackageListLoop)
755          $(Print) Done dependencies.
# Line 498 | Line 760 | $(DependencyFile) : $(DerivedSource)
760          $(Print) $@
761          @cd $(PackageSourceDir)
762  
501        touch Make.ctemp
502        touch Make.ctemp
503
763   ifneq "$(words $(CppFiles))" "0"
764 <        $(CppCompiler) $(IncludePath) -MM $(CppFiles)  > Make.cpptemp
765 <        cat Make.cpptemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/obj\/&/g' >> $(DependencyFile)
766 <        cat Make.cpptemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/MPIobj\/&/g' >> $(DependencyFile)
764 >        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(TargetDir)/' -MM $(CppFiles)>> Make.cpptemp
765 >        @cat Make.cpptemp  >> $(DependencyFile)
766 >        $(Delete) Make.cpptemp
767 >
768 >  ifeq "$(UseMPI)" "yes"
769 >        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(ParallelTargetDir)/' $(ParallelDeclare) -MM $(CppFiles)>> Make.cpptemp
770 >        @cat Make.cpptemp  >> $(DependencyFile)
771 >        @$(Delete) Make.cpptemp
772 >  endif
773 >
774   endif
775  
776   ifneq "$(words $(CFiles))" "0"
777 <        $(CCompiler)   $(IncludePath) -MM $(CFiles) $(DerivedCFiles)   > Make.ctemp
778 <        cat Make.ctemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/obj\/&/g' >> $(DependencyFile)
779 <        cat Make.ctemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/MPIobj\/&/g' >> $(DependencyFile)
777 >        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(TargetDir)/'  -MM $(CFiles) $(DerivedCFiles)  >> Make.ctemp
778 >        @cat Make.ctemp  >> $(DependencyFile)
779 >        $(Delete) Make.ctemp
780  
781 +  ifeq "$(UseMPI)" "yes"
782 +        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(ParallelTargetDir)/' $(ParallelDeclare) -MM $(CFiles) $(DerivedCFiles)  >> Make.ctemp
783 +        @cat Make.ctemp  >> $(DependencyFile)
784 +        @$(Delete) Make.ctemp
785 +  endif
786 +
787   endif
788  
789   ifneq "$(words $(F90Files))" "0"
790 <        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(DEV_ROOT)/obj/' -D__F90  *.F90 > Make.ftemp
791 <        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(DEV_ROOT)/MPIobj/' -DIS_MPI -D__F90  *.F90 >> Make.ftemp
792 <        cat Make.ftemp >> $(DependencyFile)
790 >        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(TargetDir)/' $(F90Declare) -MM -mc $(ModuleCase) -ms $(ModSuffix) $(F90Files) > Make.ftemp
791 >        @cat Make.ftemp >> $(DependencyFile)
792 >        @$(Delete) Make.ftemp
793 >
794 >  ifeq "$(UseMPI)" "yes"
795 >        $(DEV_ROOT)/scripts/filepp  -I $(DEV_ROOT)/src -od '$$(ParallelTargetDir)/' $(ParallelDeclare) $(F90Declare) -MM -mc $(ModuleCase) -ms $(ModSuffix)  $(F90Files) >> Make.ftemp
796 >        @cat Make.ftemp >> $(DependencyFile)
797 >        @$(Delete) Make.ftemp
798 >  endif
799 >
800   endif
522        $(Delete) Make.cpptemp Make.ctemp Make.ftemp
801  
802   # make lib
803   lib    : $(PackageListLoop)
# Line 532 | Line 810 | jarsign : $(JarFile)
810   jarsign : $(JarFile)
811          $(JarSigner) -keystore GeoSoftKeystore $(JarFile) myself
812  
813 + #make install
814 + %.install :
815 +        @$(MAKE) $(MakeOptions) -C $(subst .install,,$@) _installall    
816 +
817 + install : $(InstallListLoop)
818 +        $(Print) Done Install
819 +
820 + _installall : _buildall _installdata _installlinks
821 +
822 + $(MyInstallDir) :
823 +        $(MkDir) $@
824 +
825 + _installdata :  $(MyInstallDir)
826 +        $(Print) $(InstallFiles)
827 + ifneq "$(words $(InstallFiles))" "0"
828 +        $(InstallCommand) $(InstallFiles) $(MyInstallDir)
829 + endif      
830 +
831 + _installlinks :  $(MyInstallDir)
832 + ifneq "$(words $(MyLinkTargets))" "0"
833 +        @cd $(MyInstallDir)
834 +        $(foreach thisLink,$(MyLinkTargets),$(call do_link,$(MyLinkSource),$(thisLink)))
835 + endif      
836 +
837   # make statistics
838   _statisticsall :
839 <        @$(Print) $(SourceFiles) >> $(DEV_ROOT)/files.tmp
839 >        @$(Print) $(patsubst %,$(CurrentDir)/%,$(SourceFiles)) >> $(DEV_ROOT)/files.tmp
840  
841   statistics : $(PackageListLoop)
842          @$(List) $(DEV_ROOT)/files.tmp | xargs $(WordCount) $(WordCountOptions)
# Line 542 | Line 844 | $(Executable).pure :
844          $(Print) Done statistics.
845  
846   # make pure
847 < $(Executable).pure :
848 <        $(Purify) $(PurifyOptions) $(CppCompiler) $(LinkOptions) $(LibDirs) \
849 <        $(LibList) $(ObjectFiles) -o $@
847 > #$(Executable).pure :
848 > #       $(Purify) $(PurifyOptions) $(CppCompiler) $(LinkOptions) $(LibDirs) \
849 > #       $(LibList) $(ObjectFiles) -o $@
850 > #
851 > #pure : $(Executable).pure
852  
853 < pure : $(Executable).pure
853 > #make cvslog
854 > cvslog:
855 >        $(DEV_ROOT)/scripts/cvs2cl
856  
857   # Execute
858   _runexe :

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