53 |
|
" select not DMPC -- select all atoms and all rigidbodies do not belong to DMPC molecule\n" |
54 |
|
" select C* and 4 to 7 -- select stuntdoubles which match C* and which index is between [4, 7)\n" |
55 |
|
" select 5 -- select stuntdobule whose global index is 5\n" |
56 |
< |
" select within (5.0, HDP or PO4) -- select stuntdoubles which is within 5 A to HDP or PO4\n" |
56 |
> |
" select within (5.0, HDP or PO4) -- select stuntdoubles which is within 5 A to HDP or PO4\n" |
57 |
> |
" select DMPC.3 -- select stuntdouble which internal index is 3\n" |
58 |
|
" select DMPC.DMPC_RB_*.* --select atoms belong to rigid body inside DMPC molecule \n"); |
59 |
|
printf(" --repeatX=INT The number of images to repeat in the x \n direction (default=`0')\n"); |
60 |
|
printf(" --repeatY=INT The number of images to repeat in the y \n direction (default=`0')\n"); |