| 1 |
tim |
1961 |
/* |
| 2 |
|
|
* Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. |
| 3 |
|
|
* |
| 4 |
|
|
* The University of Notre Dame grants you ("Licensee") a |
| 5 |
|
|
* non-exclusive, royalty free, license to use, modify and |
| 6 |
|
|
* redistribute this software in source and binary code form, provided |
| 7 |
|
|
* that the following conditions are met: |
| 8 |
|
|
* |
| 9 |
|
|
* 1. Acknowledgement of the program authors must be made in any |
| 10 |
|
|
* publication of scientific results based in part on use of the |
| 11 |
|
|
* program. An acceptable form of acknowledgement is citation of |
| 12 |
|
|
* the article in which the program was described (Matthew |
| 13 |
|
|
* A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher |
| 14 |
|
|
* J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented |
| 15 |
|
|
* Parallel Simulation Engine for Molecular Dynamics," |
| 16 |
|
|
* J. Comput. Chem. 26, pp. 252-271 (2005)) |
| 17 |
|
|
* |
| 18 |
|
|
* 2. Redistributions of source code must retain the above copyright |
| 19 |
|
|
* notice, this list of conditions and the following disclaimer. |
| 20 |
|
|
* |
| 21 |
|
|
* 3. Redistributions in binary form must reproduce the above copyright |
| 22 |
|
|
* notice, this list of conditions and the following disclaimer in the |
| 23 |
|
|
* documentation and/or other materials provided with the |
| 24 |
|
|
* distribution. |
| 25 |
|
|
* |
| 26 |
|
|
* This software is provided "AS IS," without a warranty of any |
| 27 |
|
|
* kind. All express or implied conditions, representations and |
| 28 |
|
|
* warranties, including any implied warranty of merchantability, |
| 29 |
|
|
* fitness for a particular purpose or non-infringement, are hereby |
| 30 |
|
|
* excluded. The University of Notre Dame and its licensors shall not |
| 31 |
|
|
* be liable for any damages suffered by licensee as a result of |
| 32 |
|
|
* using, modifying or distributing the software or its |
| 33 |
|
|
* derivatives. In no event will the University of Notre Dame or its |
| 34 |
|
|
* licensors be liable for any lost revenue, profit or data, or for |
| 35 |
|
|
* direct, indirect, special, consequential, incidental or punitive |
| 36 |
|
|
* damages, however caused and regardless of the theory of liability, |
| 37 |
|
|
* arising out of the use of or inability to use software, even if the |
| 38 |
|
|
* University of Notre Dame has been advised of the possibility of |
| 39 |
|
|
* such damages. |
| 40 |
|
|
*/ |
| 41 |
|
|
|
| 42 |
|
|
#include "utils/BitSet.hpp" |
| 43 |
|
|
#include <algorithm> |
| 44 |
|
|
namespace oopse { |
| 45 |
|
|
int BitSet::countBits() { |
| 46 |
|
|
std::count(bitset_.begin(), bitset_.end(), true); |
| 47 |
|
|
} |
| 48 |
|
|
|
| 49 |
|
|
void BitSet::flip(int fromIndex, int toIndex) { |
| 50 |
|
|
assert(fromIndex <= toIndex); |
| 51 |
|
|
assert(fromIndex >=0); |
| 52 |
|
|
assert(toIndex <= size()); |
| 53 |
|
|
std::vector<char>::iterator first = bitset_.begin() + fromIndex; |
| 54 |
|
|
std::vector<char>::iterator last = bitset_.begin() + toIndex; |
| 55 |
|
|
|
| 56 |
|
|
std::transform(first, last, first, std::logical_not<bool>()); |
| 57 |
|
|
|
| 58 |
|
|
} |
| 59 |
|
|
|
| 60 |
|
|
BitSet BitSet::get(int fromIndex, int toIndex) { |
| 61 |
|
|
assert(fromIndex <= toIndex); |
| 62 |
|
|
assert(fromIndex >=0); |
| 63 |
|
|
assert(toIndex <= size()); |
| 64 |
|
|
std::vector<char>::iterator first = bitset_.begin() + fromIndex; |
| 65 |
|
|
std::vector<char>::iterator last = bitset_.begin() + toIndex; |
| 66 |
|
|
|
| 67 |
|
|
BitSet result; |
| 68 |
|
|
std::copy(first, last, std::back_inserter(result.bitset_)); |
| 69 |
|
|
return result; |
| 70 |
|
|
} |
| 71 |
|
|
|
| 72 |
|
|
bool BitSet::isEmpty() { |
| 73 |
|
|
std::vector<char>::iterator i = std::find(bitset_.begin(), bitset_.end(), true); |
| 74 |
|
|
return i == bitset_.end() ? true : false; |
| 75 |
|
|
} |
| 76 |
|
|
|
| 77 |
|
|
int BitSet::nextOffBit(int fromIndex) { |
| 78 |
|
|
|
| 79 |
|
|
} |
| 80 |
|
|
|
| 81 |
|
|
int BitSet::nextOnBit(int fromIndex); |
| 82 |
|
|
|
| 83 |
|
|
void BitSet::and(const BitSet& bs) { |
| 84 |
|
|
assert(size() == bs.size()); |
| 85 |
|
|
|
| 86 |
|
|
std::transform(bs.bitset_.begin(), bs.bitset_.end(), bitset_.begin(), bitset_.begin(), std::logical_and<bool>()); |
| 87 |
|
|
} |
| 88 |
|
|
|
| 89 |
|
|
void BitSet::andNot(const BitSet& bs) { |
| 90 |
|
|
assert(size() == bs.size()); |
| 91 |
|
|
std::transform(bs.bitset_.begin(), bs.bitset_.end(), bitset_.begin(), bitset_.begin(), oopse::logical_andNot<bool>()); |
| 92 |
|
|
} |
| 93 |
|
|
|
| 94 |
|
|
void BitSet::or(const BitSet& bs){ |
| 95 |
|
|
assert(size() == bs.size()); |
| 96 |
|
|
std::transform(bs.bitset_.begin(), bs.bitset_.end(), bitset_.begin(), bitset_.begin(), std::logical_or<bool>()); |
| 97 |
|
|
} |
| 98 |
|
|
|
| 99 |
|
|
void BitSet::xor(const BitSet& bs); { |
| 100 |
|
|
assert(size() == bs.size()); |
| 101 |
|
|
std::transform(bs.bitset_.begin(), bs.bitset_.end(), bitset_.begin(), bitset_.begin(), oopse::logical_xor<bool>()); |
| 102 |
|
|
} |
| 103 |
|
|
|
| 104 |
|
|
void BitSet::setBits(int fromIndex, int toIndex, bool value) { |
| 105 |
|
|
assert(fromIndex <= toIndex); |
| 106 |
|
|
assert(fromIndex >=0); |
| 107 |
|
|
assert(toIndex <= size()); |
| 108 |
|
|
std::vector<char>::iterator first = bitset_.begin() + fromIndex; |
| 109 |
|
|
std::vector<char>::iterator last = bitset_.begin() + toIndex; |
| 110 |
|
|
std::fill(first, last, value); |
| 111 |
|
|
} |
| 112 |
|
|
|
| 113 |
|
|
BitSet operator| (BitSet& bs1, BitSet& bs2) { |
| 114 |
|
|
assert(bs1.size() == bs2.size()); |
| 115 |
|
|
|
| 116 |
|
|
BitSet result(bs1); |
| 117 |
|
|
result |= bs2; |
| 118 |
|
|
return result; |
| 119 |
|
|
} |
| 120 |
|
|
|
| 121 |
|
|
BitSet operator& (BitSet& bs1, BitSet& bs2) { |
| 122 |
|
|
assert(bs1.size() == bs2.size()); |
| 123 |
|
|
|
| 124 |
|
|
BitSet result(bs1); |
| 125 |
|
|
result &= bs2; |
| 126 |
|
|
return result; |
| 127 |
|
|
} |
| 128 |
|
|
|
| 129 |
|
|
BitSet operator^ (BitSet& bs1, BitSet& bs2) { |
| 130 |
|
|
assert(bs1.size() == bs2.size()); |
| 131 |
|
|
|
| 132 |
|
|
BitSet result(bs1); |
| 133 |
|
|
result ^= bs2; |
| 134 |
|
|
return result; |
| 135 |
|
|
} |
| 136 |
|
|
|
| 137 |
|
|
bool operator== (const BitSet & bs1, const BitSet &bs2) { |
| 138 |
|
|
assert(bs1.size() == bs2.size()); |
| 139 |
|
|
return std::equal(bs1.bitset_.begin(), bs1.bitset_.end(), bs2.bitset_.begin()); |
| 140 |
|
|
} |
| 141 |
|
|
|
| 142 |
|
|
std::istream& operator>> ( std::istream& is, BitSet& bs) { |
| 143 |
|
|
|
| 144 |
|
|
} |
| 145 |
|
|
|
| 146 |
|
|
std::ostream& operator<< ( std::ostream& os, const BitSet& bs) { |
| 147 |
|
|
|
| 148 |
|
|
} |
| 149 |
|
|
|
| 150 |
|
|
} |