--- trunk/OOPSE-2.0/src/visitors/RigidBodyVisitor.hpp 2004/09/24 16:27:58 1492 +++ trunk/OOPSE-2.0/src/visitors/RigidBodyVisitor.hpp 2005/04/15 22:04:00 2204 @@ -1,42 +1,85 @@ -#ifndef _RIGIDBODYVISITOR_H_ -#define _RIGIDBODYVISITOR_H_ +/* + * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved. + * + * The University of Notre Dame grants you ("Licensee") a + * non-exclusive, royalty free, license to use, modify and + * redistribute this software in source and binary code form, provided + * that the following conditions are met: + * + * 1. Acknowledgement of the program authors must be made in any + * publication of scientific results based in part on use of the + * program. An acceptable form of acknowledgement is citation of + * the article in which the program was described (Matthew + * A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher + * J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented + * Parallel Simulation Engine for Molecular Dynamics," + * J. Comput. Chem. 26, pp. 252-271 (2005)) + * + * 2. Redistributions of source code must retain the above copyright + * notice, this list of conditions and the following disclaimer. + * + * 3. Redistributions in binary form must reproduce the above copyright + * notice, this list of conditions and the following disclaimer in the + * documentation and/or other materials provided with the + * distribution. + * + * This software is provided "AS IS," without a warranty of any + * kind. All express or implied conditions, representations and + * warranties, including any implied warranty of merchantability, + * fitness for a particular purpose or non-infringement, are hereby + * excluded. The University of Notre Dame and its licensors shall not + * be liable for any damages suffered by licensee as a result of + * using, modifying or distributing the software or its + * derivatives. In no event will the University of Notre Dame or its + * licensors be liable for any lost revenue, profit or data, or for + * direct, indirect, special, consequential, incidental or punitive + * damages, however caused and regardless of the theory of liability, + * arising out of the use of or inability to use software, even if the + * University of Notre Dame has been advised of the possibility of + * such damages. + */ + +#ifndef VISITORS_RIGIDBODYVISITOR_HPP +#define VISITORS_RIGIDBODYVISITOR_HPP #include #include #include #include "visitors/BaseVisitor.hpp" -#include "utils/GenericData.hpp" +#include "visitors/AtomData.hpp" -using namespace std; -class BaseRigidBodyVisitor: public BaseVisitor{ + +namespace oopse { + + class BaseRigidBodyVisitor: public BaseVisitor{ public: protected: - BaseRigidBodyVisitor(SimInfo* info) : BaseVisitor(){ this->info = info;} + BaseRigidBodyVisitor(SimInfo* info) : BaseVisitor(){ this->info = info;} - SimInfo* info; -}; + SimInfo* info; + }; -//LipidHeadVisitor adds a pesudo atom into rigidbody which holds a dipole moment -class LipidHeadVisitor : public BaseRigidBodyVisitor{ + //LipidHeadVisitor adds a pesudo atom into rigidbody which holds a dipole moment + class LipidHeadVisitor : public BaseRigidBodyVisitor{ public: - LipidHeadVisitor(SimInfo* info) : BaseRigidBodyVisitor(info){ visitorName = "LipidHeadVisitor";} + LipidHeadVisitor(SimInfo* info) : BaseRigidBodyVisitor(info){ visitorName = "LipidHeadVisitor";} virtual void visit(Atom* atom) {} virtual void visit(DirectionalAtom* datom) {} virtual void visit(RigidBody* rb); - void addLipidHeadName(const string& name); - virtual const string toString(); + void addLipidHeadName(const std::string& name); + virtual const std::string toString(); protected: - bool canVisit(const string& name); + bool canVisit(const std::string& name); - set lipidHeadName; -}; + std::set lipidHeadName; + }; -class RBCOMVisitor : public BaseRigidBodyVisitor{ + class RBCOMVisitor : public BaseRigidBodyVisitor{ public: RBCOMVisitor(SimInfo* info) : BaseRigidBodyVisitor(info){ visitorName = "RBCOMVisitor";} @@ -44,6 +87,8 @@ class RBCOMVisitor : public BaseRigidBodyVisitor{ virtual void visit(DirectionalAtom* datom) {} virtual void visit(RigidBody* rb); - virtual const string toString(); -}; + virtual const std::string toString(); + }; + +}//namespace oopse #endif