58 |
|
applications/dump2Xyz \ |
59 |
|
applications/simpleBuilder |
60 |
|
|
61 |
+ |
Samples = \ |
62 |
+ |
samples/argon \ |
63 |
+ |
samples/water/dimer \ |
64 |
+ |
samples/water/spce \ |
65 |
+ |
samples/water/ssd \ |
66 |
+ |
samples/water/ssde \ |
67 |
+ |
samples/water/tip3p_ice \ |
68 |
+ |
samples/water/tip4p \ |
69 |
+ |
samples/lipid \ |
70 |
+ |
samples/alkane \ |
71 |
+ |
samples/minimizer \ |
72 |
+ |
samples/metals \ |
73 |
+ |
samples/zcons \ |
74 |
+ |
|
75 |
|
IncludeDirs = \ |
76 |
|
@SPRNG_INC_DIR@ \ |
77 |
|
@MPI_INC_DIR@ |
89 |
|
ForceParamDir = @OOPSE_HOME@/share/forceFields/ |
90 |
|
SampleSimDir = @OOPSE_HOME@/share/samples/ |
91 |
|
FrcDeclare = -DFRC_PATH="$(ForceParamDir)" |
92 |
+ |
F90Declare = -D__FORTRAN90 |
93 |
|
ParallelDeclare = -DIS_MPI |
94 |
|
UseMPI = @USE_MPI@ |
95 |
+ |
ModuleCase = @F90_MODULE_NAMES@ |
96 |
+ |
ModSuffix = @MOD@ |
97 |
|
LinkOptions = \ |
98 |
|
@F90LIBS@ |
99 |
|
|
111 |
|
TargetDir = $(DEV_ROOT)/obj |
112 |
|
ParallelTargetDir = $(DEV_ROOT)/MPIobj |
113 |
|
LibDir = $(DEV_ROOT)/lib |
97 |
– |
ParallelLibDir = $(DEV_ROOT)/MPIlib |
114 |
|
MakeDir = $(DEV_ROOT)/make |
115 |
|
BinDir = $(DEV_ROOT)/bin |
116 |
|
DocsDir = $(DEV_ROOT)/docs |
272 |
|
Yacc = @YACC@ |
273 |
|
Lex = @LEX@ |
274 |
|
Ranlib = @RANLIB@ |
275 |
< |
|
275 |
> |
Doxygen = @DOXYGEN@ |
276 |
|
|
277 |
|
MakeOptions = -k |
278 |
|
MakeDependOptions = |
429 |
|
|
430 |
|
$(LibDir)/%_UP.a : $(ObjectFiles) |
431 |
|
$(StaticArchiver) $(StaticArchiverOptions) $@ $(ObjectFiles) |
432 |
< |
touch $(LibDir)/.stamp_UP |
432 |
> |
@touch $(LibDir)/.stamp_UP |
433 |
|
|
434 |
|
$(LibDir)/%_MPI.a: $(ParallelObjectFiles) |
435 |
|
$(StaticArchiver) $(StaticArchiverOptions) $@ $(ParallelObjectFiles) |
436 |
< |
touch $(LibDir)/.stamp_MPI |
436 |
> |
@touch $(LibDir)/.stamp_MPI |
437 |
|
|
438 |
|
%_UP.a : $(ObjectFiles) |
439 |
|
$(MAKE) $(MakeOptions) $(LibDir)/$@ |
485 |
|
|
486 |
|
%_Skel.class : %.class |
487 |
|
$(MAKE) $(MakeOptions) $(PackageTargetDir)/$@ |
488 |
+ |
|
489 |
+ |
document : |
490 |
+ |
$(Print) Generate Documentation for OOPSE-2.0 |
491 |
+ |
@cd $(DEV_ROOT)/src |
492 |
+ |
$(Doxygen) $(DEV_ROOT)/make/Doxyfile |
493 |
|
|
494 |
|
#GUN make funtions to merge the libraries |
495 |
|
find_objs = $(shell $(StaticArchiver) -t $(1)) |
498 |
|
remove_objs = $(shell $(Delete) $(call find_objs, $(1))) |
499 |
|
do_create = $(call extract_objs,$(1))$(call create_archive,$(1),$(2))$(call remove_objs,$(1)) |
500 |
|
|
501 |
< |
$(CombinedStaticLib) : $(LibDir)/.stamp_UP |
501 |
> |
$(CombinedStaticLib) : $(LibDir)/.stamp_UP |
502 |
> |
$(Print) create $@ |
503 |
|
$(foreach thisLib,$(LibNames),$(call do_create,$(thisLib),$@)) |
504 |
|
$(Ranlib) $(CombinedStaticLib) |
505 |
|
|
506 |
|
$(CombinedParallelStaticLib) : $(LibDir)/.stamp_MPI |
507 |
+ |
$(Print) create $@ |
508 |
|
$(foreach thisLib,$(ParallelLibNames), $(call do_create, $(thisLib), $@)) |
509 |
|
$(Ranlib) $(CombinedParallelStaticLib) |
510 |
|
|
590 |
|
$(Print) $@ |
591 |
|
@cd $(PackageSourceDir) |
592 |
|
|
570 |
– |
@touch Make.ctemp |
571 |
– |
@touch Make.ctemp |
572 |
– |
|
593 |
|
ifneq "$(words $(CppFiles))" "0" |
594 |
< |
$(CppCompiler) $(IncludePath) -MM $(CppFiles) > Make.cpptemp |
595 |
< |
cat Make.cpptemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/obj\/&/g' >> $(DependencyFile) |
596 |
< |
cat Make.cpptemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/MPIobj\/&/g' >> $(DependencyFile) |
594 |
> |
$(CppCompiler) $(CppOptions) $(IncludePath) -MM $(CppFiles) > Make.cpptemp |
595 |
> |
@cat Make.cpptemp | sed 's/^[a-zA-Z0-9]/$$\(TargetDir\)\/&/g' >> $(DependencyFile) |
596 |
> |
$(Delete) Make.cpptemp |
597 |
> |
$(CppCompiler) $(CppParallelOptions) $(IncludePath) -MM $(CppFiles) > Make.cpptemp |
598 |
> |
@cat Make.cpptemp | sed 's/^[a-zA-Z0-9]/$$\(ParallelTargetDir\)\/&/g' >> $(DependencyFile) |
599 |
> |
@$(Delete) Make.cpptemp |
600 |
|
endif |
601 |
|
|
602 |
|
ifneq "$(words $(CFiles))" "0" |
603 |
< |
$(CCompiler) $(IncludePath) -MM $(CFiles) $(DerivedCFiles) > Make.ctemp |
604 |
< |
cat Make.ctemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/obj\/&/g' >> $(DependencyFile) |
605 |
< |
cat Make.ctemp | sed 's/^[a-zA-Z0-9]/$$\(DEV_ROOT\)\/MPIobj\/&/g' >> $(DependencyFile) |
606 |
< |
|
603 |
> |
$(CCompiler) $(COptions) $(IncludePath) -MM $(CFiles) $(DerivedCFiles) > Make.ctemp |
604 |
> |
@cat Make.ctemp | sed 's/^[a-zA-Z0-9]/$$\(TargetDir\)\/&/g' >> $(DependencyFile) |
605 |
> |
$(Delete) Make.ctemp |
606 |
> |
$(CCompiler) $(CParallelOptions) $(IncludePath) -MM $(CFiles) $(DerivedCFiles) > Make.ctemp |
607 |
> |
@cat Make.ctemp | sed 's/^[a-zA-Z0-9]/$$\(ParallelTargetDir\)\/&/g' >> $(DependencyFile) |
608 |
> |
@$(Delete) Make.ctemp |
609 |
|
endif |
610 |
|
|
611 |
|
ifneq "$(words $(F90Files))" "0" |
612 |
< |
$(DEV_ROOT)/scripts/filepp -I $(DEV_ROOT)/src -od '$$(DEV_ROOT)/obj/' -D__FORTRAN90 $(F90Files) > Make.ftemp |
613 |
< |
$(DEV_ROOT)/scripts/filepp -I $(DEV_ROOT)/src -od '$$(DEV_ROOT)/MPIobj/' -DIS_MPI -D__FORTRAN90 $(F90Files) >> Make.ftemp |
614 |
< |
cat Make.ftemp >> $(DependencyFile) |
612 |
> |
$(DEV_ROOT)/scripts/filepp -I $(DEV_ROOT)/src -od '$$(TargetDir)/' $(F90Declare) -mc $(ModuleCase) -ms $(ModSuffix) $(F90Files) > Make.ftemp |
613 |
> |
$(DEV_ROOT)/scripts/filepp -I $(DEV_ROOT)/src -od '$$(ParallelTargetDir)/' $(ParallelDeclare) $(F90Declare) -mc $(ModuleCase) -ms $(ModSuffix) $(F90Files) >> Make.ftemp |
614 |
> |
@cat Make.ftemp >> $(DependencyFile) |
615 |
> |
@$(Delete) Make.ftemp |
616 |
|
endif |
591 |
– |
$(Delete) Make.cpptemp Make.ctemp Make.ftemp |
617 |
|
|
618 |
|
# make lib |
619 |
|
lib : $(PackageListLoop) |
628 |
|
|
629 |
|
# make statistics |
630 |
|
_statisticsall : |
631 |
< |
@$(Print) $(SourceFiles) >> $(DEV_ROOT)/files.tmp |
631 |
> |
@$(Print) $(patsubst %,$(CurrentDir)/%,$(SourceFiles)) >> $(DEV_ROOT)/files.tmp |
632 |
|
|
633 |
|
statistics : $(PackageListLoop) |
634 |
|
@$(List) $(DEV_ROOT)/files.tmp | xargs $(WordCount) $(WordCountOptions) |