--- trunk/OOPSE-3.0/make/Makefile.in	2004/11/04 20:55:01	1712
+++ trunk/OOPSE-3.0/make/Makefile.in	2005/03/10 15:10:24	2101
@@ -38,6 +38,7 @@ PackageLibs = \
 #packages containing libraries
 PackageLibs = \
 	utils \
+	visitors \
 	math \
 	types \
 	primitives \
@@ -45,15 +46,19 @@ PackageLibs = \
 	UseTheForce \
 	brains \
 	io \
+	integrators\
 	constraints \
-	profiling \
+	minimizers \
+	selection \
 	restraints \
 
 #packages containing applications
 Applications = \
 	applications/oopse \
 	applications/dump2Xyz \
-	applications/simpleBuilder
+        applications/simpleBuilder\
+	applications/staticProps \
+	applications/dynamicProps \
 
 Samples = \
 	samples/argon \
@@ -70,15 +75,12 @@ IncludeDirs = \
 	samples/zcons \
 
 IncludeDirs = \
-	@SPRNG_INC_DIR@ \
 	@MPI_INC_DIR@
 
 LibraryDirs = \
-	@SPRNG_LIB_DIR@ \
 	@MPI_LIB_DIR@ 
 
 Libraries = \
-	@SPRNG_LIB@ \
 	@MPI_LIB@ \
 	@MPI_F90_LIB@
 
@@ -122,7 +124,9 @@ Package          = $(subst $(shell cd $(SourceDir); pw
 # /home/maul/gezelter/src/code/src/UseTheForce/Darkside --> UseTheForce/Darkside
 #Package          = $(shell echo $(CurrentDir) | sed -e 's/^.*\/src\/\(.*\)/\1/g')
 #use shell script to get the absolute path and then rip it off from $(CurrentDir)
-Package          = $(subst $(shell cd $(SourceDir); pwd)/,,$(CurrentDir))
+#Package          = $(subst $(shell cd $(SourceDir); pwd)/,,$(CurrentDir))
+# REMINDER: We are now using the Package line in each subdir makefile.
+# This avoids the strange path problem and the subshell
 
 PackageList              = $(Package)
 PackageSourceDir         = $(SourceDir)/$(Package)
@@ -244,7 +248,7 @@ Move                   = mv
 #
 #---------------------------------------------------------------------------
 Print                  = @echo
-Move                   = mv
+Move                   = mv -f
 Copy                   = cp
 CCompiler              = @CC@
 CppCompiler            = @CXX@
@@ -253,7 +257,7 @@ MkDir                = @MKINSTALLDIRS@
 INSTALL                = @INSTALL@
 InstallProgram         = @INSTALL_PROGRAM@
 InstallData            = @INSTALL_DATA@
-MkDir                = @MKINSTALLDIRS@
+MkDir                  = @MKINSTALLDIRS@
 Delete                 = rm -fr
 StaticArchiver         = @AR@
 DynamicArchiver        = @CC@
@@ -284,8 +288,8 @@ CppOptions             = $(FrcDeclare) @CXXFLAGS@
 			 -sourcepath $(SourceDir)
 COptions               = $(FrcDeclare) @CFLAGS@
 CParallelOptions       = $(FrcDeclare) $(ParallelDeclare) @CFLAGS@
-CppOptions             = $(FrcDeclare) @CXXFLAGS@
-CppParallelOptions     = $(FrcDeclare) $(ParallelDeclare) @CXXFLAGS@
+CppOptions             = $(FrcDeclare) @CXXFLAGS@ @OOPSE_TEMPLATE_FLAGS@
+CppParallelOptions     = $(FrcDeclare) $(ParallelDeclare) @CXXFLAGS@ @OOPSE_TEMPLATE_FLAGS@
 FortranOptions         =
 F90Options             =  @PREPFLAG@ @F90FLAGS@ @MODDIRFLAG@$(SourceDir) @MODDIRFLAG@$(TargetDir) 
 F90ParallelOptions     =  @PREPFLAG@ @F90FLAGS@ @MODDIRFLAG@$(SourceDir) @MODDIRFLAG@$(ParallelTargetDir)  @PREPDEFFLAG@$(ParallelDeclare)
@@ -363,8 +367,11 @@ $(PackageTargetDir) :
 
 # Create target directory
 $(PackageTargetDir) :
-	$(MakeDir) $@
+	$(MkDir) $@
 
+$(BinDir) :
+	$(MkDir) $@
+
 # .c -> .o
 $(PackageTargetDir)/%.o : %.c
 	$(Print) $@
@@ -418,35 +425,34 @@ $(PackageTargetDir)/%.o : %.F90
 # .F90 -> .o
 $(PackageTargetDir)/%.o : %.F90
 	$(F90Compiler) $(F90Options) $(IncludePath) -c $< -o $@
-	if test -f *.$(ModSuffix); then \
-	  $(Move) *.$(ModSuffix) $(PackageTargetDir);\
+	if test -n "`ls *.$(ModSuffix)`"; then \
+	  $(Move) `ls *.$(ModSuffix)` $(PackageTargetDir);\
 	fi
 
 $(PackageParallelTargetDir)/%.o : %.F90
 	$(F90Compiler) $(F90ParallelOptions) $(IncludePath) -c $< -o $@
-	if test -f *.$(ModSuffix); then \
-	  $(Move) *.$(ModSuffix) $(PackageParallelTargetDir);\
+	if test -n "`ls *.$(ModSuffix)`"; then \
+	  $(Move) "`ls *.$(ModSuffix)`" $(PackageParallelTargetDir);\
 	fi
 
 ifeq "$(UseMPI)" "yes"
 %.o : %.F90
 	$(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
-	if test -f *.$(ModSuffix); then \
-	  $(Move) *.$(ModSuffix) $(PackageTargetDir);\
-	fi
+	if test -n "`ls *.$(ModSuffix)`"; then\
+          $(Move) "`ls *.$(ModSuffix)`" $(PackageTargetDir);\
+        fi
 
 	$(MAKE) $(MakeOptions) $(PackageParallelTargetDir)/$@
-	if test -f *.$(ModSuffix); then \
-	  $(Move) *.$(ModSuffix) $(PackageParallelTargetDir);\
+	if test -n "`ls *.$(ModSuffix)`"; then\
+	  $(Move) "`ls *.$(ModSuffix)`" $(PackageTargetDir);\
 	fi
 
 else
 %.o : %.F90
 	$(MAKE) $(MakeOptions) $(PackageTargetDir)/$@
-	if test -f *.$(ModSuffix); then \
-	  $(Move) *.$(ModSuffix) $(PackageTargetDir);\
-	fi
-
+	if test -n "`ls *.$(ModSuffix)`"; then\
+          $(Move) "`ls *.$(ModSuffix)`" $(PackageTargetDir);\
+        fi
 endif
 
 
@@ -566,11 +572,11 @@ $(Executable) : $(CombinedStaticLib) $(ObjectFiles)
 	$(Ranlib) $(CombinedParallelStaticLib)
 
 # Executable
-$(Executable) : $(CombinedStaticLib) $(ObjectFiles)
-	$(Linker) $(ObjectFiles) $(LinkOptions) $(LibDirs) $(CombinedStaticLib) $(Libraries) -o $@
+$(Executable) : $(CombinedStaticLib) $(ObjectFiles) $(BinDir)
+	$(Linker) $(ObjectFiles) $(CombinedStaticLib) $(LinkOptions) $(LibDirs) $(Libraries) -o $@
 
-$(ParallelExecutable) : $(CombinedParallelStaticLib) $(ParallelObjectFiles)
-	$(Linker) $(ParallelObjectFiles) $(ParallelLinkOptions) $(LibDirs) $(CombinedParallelStaticLib) $(Libraries) -o $@
+$(ParallelExecutable) : $(CombinedParallelStaticLib) $(ParallelObjectFiles) $(BinDir)
+	$(Linker) $(ParallelObjectFiles) $(CombinedParallelStaticLib) $(ParallelLinkOptions) $(LibDirs) $(Libraries) -o $@
 
 # Anything else is just copied from source to target
 $(PackageTargetDir)/% : $(PackageSourceDir)/%
@@ -619,25 +625,26 @@ _cleanall :
 	$(Print) Done clean.	
 
 _cleanall :
-	$(Delete) $(ObjectFiles) $(ParallelObjectFiles)
+	$(Delete) \
+		$(ObjectFiles) \
+		$(ParallelObjectFiles) \
+		$(JarFile) \
+		$(SharedLibrary) \
+		$(StaticLibrary) \
+		$(ParallelSharedLibrary) \
+		$(ParallelStaticLibrary) \
+		$(CombinedStaticLib) \
+		$(CombinedParallelStaticLib)
 
 # make distclean
 distclean : $(PackageListLoop)
 	$(Print) Done clean.	
 
-_distcleanall :
-	$(Delete) $(ObjectFiles) \
-	          $(ParallelObjectFiles) \
-		        $(JarFile) \
-	          $(SharedLibrary) \
-	          $(StaticLibrary) \
-	          $(ParallelSharedLibrary) \
-	          $(ParallelStaticLibrary) \
-	          $(Executable) \
+_distcleanall : _cleanall
+	$(Delete) $(Executable) \
 	          $(ParallelExecutable) \
 	          $(DependencyFile) 
 
-
 # make depend
 depend : $(PackageListLoop)
 	$(Print) Done dependencies.
@@ -715,7 +722,7 @@ endif	    
 ifneq "$(words $(InstallFiles))" "0"
 	$(InstallData) $(InstallFiles) $(MyInstallDir)
 endif	    
-	
+
 # make statistics
 _statisticsall :
 	@$(Print) $(patsubst %,$(CurrentDir)/%,$(SourceFiles)) >> $(DEV_ROOT)/files.tmp