--- trunk/OOPSE-3.0/samples/water/ssdrf/water.md 2005/10/26 23:30:23 2396 +++ trunk/OOPSE-3.0/samples/water/ssdrf/water.md 2005/10/26 23:30:52 2397 @@ -20,6 +20,45 @@ molecule{ } molecule{ + name = "PAIR"; + nAtoms = 3; + atom[0]{ + type = "Pchg+"; + position(0.0, 1, 1.0); + } + atom[1]{ + type = "Pchg+"; + position(0.0, -1, 1.0); + } + atom[2]{ + type = "Pchg-"; + position(0.0, 0.0, -1.0); + } + + nRigidBodies = 1; + rigidBody[0]{ + nMembers = 3; + members(0, 1, 2); + } + + nCutoffGroups = 1; + cutoffGroup[0]{ + nMembers = 3; + members(0, 1, 2); + } +} + +molecule{ + name = "PDIP"; + nAtoms = 1; + atom[0]{ + type = "PDIP"; + position( 0.0, 0.0, 0.0 ); + orientation( 0.0, 0.0, 0.0 ); + } +} + +molecule{ name = "SSD_E"; nAtoms = 1; atom[0]{