src/selection/Token.hpp

 /*
 * Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
 *
 * The University of Notre Dame grants you ("Licensee") a
 * non-exclusive, royalty free, license to use, modify and
 * redistribute this software in source and binary code form, provided
 * that the following conditions are met:
 *
 * 1. Acknowledgement of the program authors must be made in any
 *    publication of scientific results based in part on use of the
 *    program.  An acceptable form of acknowledgement is citation of
 *    the article in which the program was described (Matthew
 *    A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
 *    J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
 *    Parallel Simulation Engine for Molecular Dynamics,"
 *    J. Comput. Chem. 26, pp. 252-271 (2005))
 *
 * 2. Redistributions of source code must retain the above copyright
 *    notice, this list of conditions and the following disclaimer.
 *
 * 3. Redistributions in binary form must reproduce the above copyright
 *    notice, this list of conditions and the following disclaimer in the
 *    documentation and/or other materials provided with the
 *    distribution.
 *
 * This software is provided "AS IS," without a warranty of any
 * kind. All express or implied conditions, representations and
 * warranties, including any implied warranty of merchantability,
 * fitness for a particular purpose or non-infringement, are hereby
 * excluded.  The University of Notre Dame and its licensors shall not
 * be liable for any damages suffered by licensee as a result of
 * using, modifying or distributing the software or its
 * derivatives. In no event will the University of Notre Dame or its
 * licensors be liable for any lost revenue, profit or data, or for
 * direct, indirect, special, consequential, incidental or punitive
 * damages, however caused and regardless of the theory of liability,
 * arising out of the use of or inability to use software, even if the
 * University of Notre Dame has been advised of the possibility of
 * such damages.
 */

#ifndef SELECTION_TOKEN_HPP
#define SELECTION_TOKEN_HPP


namespace oopse {


/**
 * @class Token
 * @todo document
 */
class Token {

    public:

        int tok;
        int intValue;
        
        const static int nada              =  0;
        const static int identifier        =  1;
        const static int integer           =  2;
        const static int decimal           =  3;
        const static int string            =  4;
        const static int seqcode           =  5;
        const static int unknown           =  6;
        const static int keyword           =  7;
        const static int whitespace        =  8;
        const static int comment           =  9;
        const static int endofline         = 10;
        const static int endofstatement    = 11;

        const static int command           = (1 <<  8);
        const static int expressionCommand = (1 <<  9); // expression command
        const static int expression        = (1 << 15); /// expression term

        // every property is also valid in an expression context
        const static int atomproperty      = (1 << 16) | expression;
        // every predefined is also valid in an expression context
        const static int comparator        = (1 << 17) | expression;
        const static int predefinedset     = (1 << 18) | expression;
        // generally, the minus sign is used to denote atom ranges
        // this property is used for the few commands which allow negative integers
        const static int negnums      = (1 << 21);
        // for some commands the 'set' is optional

        // These are unrelated
        const static int varArgCount       = (1 << 4);
        const static int onDefault1        = (1 << 5) | 1;

        // rasmol commands
        const static int define       = command | expressionCommand |1;
        const static int select       = command |expressionCommand |2 ;
        const static int all          = expression | 11 ; 

        // atom expression operators
        const static int leftparen    = expression |  0;
        const static int rightparen   = expression |  1;
        const static int hyphen       = expression |  2;
        const static int opAnd        = expression |  3;
        const static int opOr         = expression |  4;
        const static int opNot        = expression |  5;
        const static int within       = expression |  6;
        const static int plus         = expression |  7;
        const static int pick         = expression |  8;
        const static int asterisk     = expression |  9;
        const static int dot          = expression | 11;
        const static int leftsquare   = expression | 12;
        const static int rightsquare  = expression | 13;
        const static int colon        = expression | 14;
        const static int slash        = expression | 15;

        // miguel 2005 01 01
        // these are used to demark the beginning and end of expressions
        // they do not exist in the source code, but are emitted by the
        // expression compiler
        const static int expressionBegin = expression | 100;
        const static int expressionEnd   = expression | 101;

        const static int atomno       = atomproperty | 0;
        const static int elemno       = atomproperty | 1;
        const static int resno        = atomproperty | 2;
        const static int radius       = atomproperty | 3 ; 
        const static int _bondedcount = atomproperty | 6;
        const static int _groupID     = atomproperty | 7;
        const static int _atomID      = atomproperty | 8;
        const static int _structure   = atomproperty | 9;
        const static int occupancy    = atomproperty | 10;
        const static int polymerLength= atomproperty | 11;

        const static int opGT         = comparator |  0;
        const static int opGE         = comparator |  1;
        const static int opLE         = comparator |  2;
        const static int opLT         = comparator |  3;
        const static int opEQ         = comparator |  4;
        const static int opNE         = comparator |  5;
 
        const static int x            =  expression |2;
        const static int y            =  expression | 3;
        const static int z            =  expression | 4;
        const static int none      =  expression | 5;
 
 
        const static Token tokenAll(all, "all");
        const static Token tokenAnd(opAnd, "and");
        const static Token tokenElemno(elemno, "elemno");
        const static Token tokenExpressionBegin(expressionBegin, "expressionBegin");
        const static Token tokenExpressionEnd(expressionEnd, "expressionEnd");


        const static String[] comparatorNames = {">", ">=", "<=", "<", "=", "!="};
        const static String[] atomPropertyNames = {
        "atomno", "elemno", "resno", "radius", "temperature", "model",
        "_bondedcount", "_groupID", "_atomID", "_structure"};

        /*
        Note that the RasMol scripting language is case-insensitive.
        So, the compiler turns all identifiers to lower-case before
        looking up in the hash table. 
        Therefore, the left column of this array *must* be lower-case
        */

        const static Object[] arrayPairs  = {
        // commands 
        "define",            new Token(define,   varArgCount, "define"), 
        "select",            new Token(select,   varArgCount, "select"), 
        // atom expressions
        "(",            new Token(leftparen, "("),
        ")",            new Token(rightparen, ")"),
        "-",            new Token(hyphen, "-"),
        "and",          tokenAnd,
        "&",            null,
        "&&",           null,
        "or",           new Token(opOr, "or"),
        ",",            null,
        "|",            null,
        "||",            null,
        "not",          new Token(opNot, "not"),
        "!",            null,
        "<",            new Token(opLT, "<"),
        "<=",           new Token(opLE, "<="),
        ">=",           new Token(opGE, ">="),
        ">",            new Token(opGT, ">="),
        "==",           new Token(opEQ, "=="),
        "=",            null,
        "!=",           new Token(opNE, "!="),
        "<>",           null,
        "/=",           null,
        "within",       new Token(within, "within"),
        "+",            new Token(plus, "+"),
        "pick",         new Token(pick, "pick"),
        ".",            new Token(dot, "."),
        "[",            new Token(leftsquare,  "["),
        "]",            new Token(rightsquare, "]"),
        ":",            new Token(colon, ":"),
        "/",            new Token(slash, "/"),

        "atomno",       new Token(atomno, "atomno"),
        "elemno",       tokenElemno,
        "_e",           tokenElemno,
        "resno",        new Token(resno, "resno"),
        "temperature",  new Token(temperature, "temperature"),
        "relativetemperature",  null,
        "_bondedcount", new Token(_bondedcount, "_bondedcount"),
        "_groupID",     new Token(_groupID, "_groupID"),
        "_g",           null,
        "_atomID",      new Token(_atomID, "_atomID"),
        "_a",           null,
        "_structure",   new Token(_structure, "_structure"),
        "occupancy",    new Token(occupancy, "occupancy"),
        "polymerlength",new Token(polymerLength, "polymerlength"),
 
        "x",            new Token(x, "x"),
        "y",            new Token(y, "y"),
        "z",            new Token(z, "z"),
        "*",            new Token(asterisk, "*"),
        "all",          tokenAll,
        "none",         new Token(none, "none"),
 
         };


  static Hashtable map = new Hashtable();
  static {
    Token tokenLast = null;
    String stringThis;
    Token tokenThis;
    for (int i = 0; i + 1 < arrayPairs.length; i += 2) {
      stringThis = (String) arrayPairs[i];
      tokenThis = (Token) arrayPairs[i + 1];
      if (tokenThis == null)
        tokenThis = tokenLast;
      if (map.get(stringThis) != null)
        System.out.println("duplicate token definition:" + stringThis);
      map.put(stringThis, tokenThis);
      tokenLast = tokenThis;
    }
  }
  

};

}

#endif 
Revision:	1961
Committed:	Tue Feb 1 06:55:00 2005 UTC (19 years, 5 months ago) by tim
File size:	10271 byte(s)
Log Message:	adding selection library
#	User	Rev	Content
1	tim	1961	/*
2			* Copyright (c) 2005 The University of Notre Dame. All Rights Reserved.
3			*
4			* The University of Notre Dame grants you ("Licensee") a
5			* non-exclusive, royalty free, license to use, modify and
6			* redistribute this software in source and binary code form, provided
7			* that the following conditions are met:
8			*
9			* 1. Acknowledgement of the program authors must be made in any
10			* publication of scientific results based in part on use of the
11			* program. An acceptable form of acknowledgement is citation of
12			* the article in which the program was described (Matthew
13			* A. Meineke, Charles F. Vardeman II, Teng Lin, Christopher
14			* J. Fennell and J. Daniel Gezelter, "OOPSE: An Object-Oriented
15			* Parallel Simulation Engine for Molecular Dynamics,"
16			* J. Comput. Chem. 26, pp. 252-271 (2005))
17			*
18			* 2. Redistributions of source code must retain the above copyright
19			* notice, this list of conditions and the following disclaimer.
20			*
21			* 3. Redistributions in binary form must reproduce the above copyright
22			* notice, this list of conditions and the following disclaimer in the
23			* documentation and/or other materials provided with the
24			* distribution.
25			*
26			* This software is provided "AS IS," without a warranty of any
27			* kind. All express or implied conditions, representations and
28			* warranties, including any implied warranty of merchantability,
29			* fitness for a particular purpose or non-infringement, are hereby
30			* excluded. The University of Notre Dame and its licensors shall not
31			* be liable for any damages suffered by licensee as a result of
32			* using, modifying or distributing the software or its
33			* derivatives. In no event will the University of Notre Dame or its
34			* licensors be liable for any lost revenue, profit or data, or for
35			* direct, indirect, special, consequential, incidental or punitive
36			* damages, however caused and regardless of the theory of liability,
37			* arising out of the use of or inability to use software, even if the
38			* University of Notre Dame has been advised of the possibility of
39			* such damages.
40			*/
41
42			#ifndef SELECTION_TOKEN_HPP
43			#define SELECTION_TOKEN_HPP
44
45
46			namespace oopse {
47
48
49			/**
50			* @class Token
51			* @todo document
52			*/
53			class Token {
54
55			public:
56
57			int tok;
58			int intValue;
59
60			const static int nada = 0;
61			const static int identifier = 1;
62			const static int integer = 2;
63			const static int decimal = 3;
64			const static int string = 4;
65			const static int seqcode = 5;
66			const static int unknown = 6;
67			const static int keyword = 7;
68			const static int whitespace = 8;
69			const static int comment = 9;
70			const static int endofline = 10;
71			const static int endofstatement = 11;
72
73			const static int command = (1 << 8);
74			const static int expressionCommand = (1 << 9); // expression command
75			const static int expression = (1 << 15); /// expression term
76
77			// every property is also valid in an expression context
78			const static int atomproperty = (1 << 16) \| expression;
79			// every predefined is also valid in an expression context
80			const static int comparator = (1 << 17) \| expression;
81			const static int predefinedset = (1 << 18) \| expression;
82			// generally, the minus sign is used to denote atom ranges
83			// this property is used for the few commands which allow negative integers
84			const static int negnums = (1 << 21);
85			// for some commands the 'set' is optional
86
87			// These are unrelated
88			const static int varArgCount = (1 << 4);
89			const static int onDefault1 = (1 << 5) \| 1;
90
91			// rasmol commands
92			const static int define = command \| expressionCommand \|1;
93			const static int select = command \|expressionCommand \|2 ;
94			const static int all = expression \| 11 ;
95
96			// atom expression operators
97			const static int leftparen = expression \| 0;
98			const static int rightparen = expression \| 1;
99			const static int hyphen = expression \| 2;
100			const static int opAnd = expression \| 3;
101			const static int opOr = expression \| 4;
102			const static int opNot = expression \| 5;
103			const static int within = expression \| 6;
104			const static int plus = expression \| 7;
105			const static int pick = expression \| 8;
106			const static int asterisk = expression \| 9;
107			const static int dot = expression \| 11;
108			const static int leftsquare = expression \| 12;
109			const static int rightsquare = expression \| 13;
110			const static int colon = expression \| 14;
111			const static int slash = expression \| 15;
112
113			// miguel 2005 01 01
114			// these are used to demark the beginning and end of expressions
115			// they do not exist in the source code, but are emitted by the
116			// expression compiler
117			const static int expressionBegin = expression \| 100;
118			const static int expressionEnd = expression \| 101;
119
120			const static int atomno = atomproperty \| 0;
121			const static int elemno = atomproperty \| 1;
122			const static int resno = atomproperty \| 2;
123			const static int radius = atomproperty \| 3 ;
124			const static int _bondedcount = atomproperty \| 6;
125			const static int _groupID = atomproperty \| 7;
126			const static int _atomID = atomproperty \| 8;
127			const static int _structure = atomproperty \| 9;
128			const static int occupancy = atomproperty \| 10;
129			const static int polymerLength= atomproperty \| 11;
130
131			const static int opGT = comparator \| 0;
132			const static int opGE = comparator \| 1;
133			const static int opLE = comparator \| 2;
134			const static int opLT = comparator \| 3;
135			const static int opEQ = comparator \| 4;
136			const static int opNE = comparator \| 5;
137
138			const static int x = expression \|2;
139			const static int y = expression \| 3;
140			const static int z = expression \| 4;
141			const static int none = expression \| 5;
142
143
144			const static Token tokenAll(all, "all");
145			const static Token tokenAnd(opAnd, "and");
146			const static Token tokenElemno(elemno, "elemno");
147			const static Token tokenExpressionBegin(expressionBegin, "expressionBegin");
148			const static Token tokenExpressionEnd(expressionEnd, "expressionEnd");
149
150
151			const static String[] comparatorNames = {">", ">=", "<=", "<", "=", "!="};
152			const static String[] atomPropertyNames = {
153			"atomno", "elemno", "resno", "radius", "temperature", "model",
154			"_bondedcount", "_groupID", "_atomID", "_structure"};
155
156			/*
157			Note that the RasMol scripting language is case-insensitive.
158			So, the compiler turns all identifiers to lower-case before
159			looking up in the hash table.
160			Therefore, the left column of this array must be lower-case
161			*/
162
163			const static Object[] arrayPairs = {
164			// commands
165			"define", new Token(define, varArgCount, "define"),
166			"select", new Token(select, varArgCount, "select"),
167			// atom expressions
168			"(", new Token(leftparen, "("),
169			")", new Token(rightparen, ")"),
170			"-", new Token(hyphen, "-"),
171			"and", tokenAnd,
172			"&", null,
173			"&&", null,
174			"or", new Token(opOr, "or"),
175			",", null,
176			"\|", null,
177			"\|\|", null,
178			"not", new Token(opNot, "not"),
179			"!", null,
180			"<", new Token(opLT, "<"),
181			"<=", new Token(opLE, "<="),
182			">=", new Token(opGE, ">="),
183			">", new Token(opGT, ">="),
184			"==", new Token(opEQ, "=="),
185			"=", null,
186			"!=", new Token(opNE, "!="),
187			"<>", null,
188			"/=", null,
189			"within", new Token(within, "within"),
190			"+", new Token(plus, "+"),
191			"pick", new Token(pick, "pick"),
192			".", new Token(dot, "."),
193			"[", new Token(leftsquare, "["),
194			"]", new Token(rightsquare, "]"),
195			":", new Token(colon, ":"),
196			"/", new Token(slash, "/"),
197
198			"atomno", new Token(atomno, "atomno"),
199			"elemno", tokenElemno,
200			"_e", tokenElemno,
201			"resno", new Token(resno, "resno"),
202			"temperature", new Token(temperature, "temperature"),
203			"relativetemperature", null,
204			"_bondedcount", new Token(_bondedcount, "_bondedcount"),
205			"_groupID", new Token(_groupID, "_groupID"),
206			"_g", null,
207			"_atomID", new Token(_atomID, "_atomID"),
208			"_a", null,
209			"_structure", new Token(_structure, "_structure"),
210			"occupancy", new Token(occupancy, "occupancy"),
211			"polymerlength",new Token(polymerLength, "polymerlength"),
212
213			"x", new Token(x, "x"),
214			"y", new Token(y, "y"),
215			"z", new Token(z, "z"),
216			"", new Token(asterisk, ""),
217			"all", tokenAll,
218			"none", new Token(none, "none"),
219
220			};
221
222
223			static Hashtable map = new Hashtable();
224			static {
225			Token tokenLast = null;
226			String stringThis;
227			Token tokenThis;
228			for (int i = 0; i + 1 < arrayPairs.length; i += 2) {
229			stringThis = (String) arrayPairs[i];
230			tokenThis = (Token) arrayPairs[i + 1];
231			if (tokenThis == null)
232			tokenThis = tokenLast;
233			if (map.get(stringThis) != null)
234			System.out.println("duplicate token definition:" + stringThis);
235			map.put(stringThis, tokenThis);
236			tokenLast = tokenThis;
237			}
238			}
239
240
241			};
242
243			}
244
245			#endif