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Comparing trunk/OOPSE-4/ChangeLog (file contents):
Revision 2229 by chrisfen, Tue May 17 22:35:01 2005 UTC vs.
Revision 2337 by chrisfen, Wed Sep 28 18:46:04 2005 UTC

# Line 1 | Line 1
1 + 2005-09-28 11:55  tim
2 +
3 +        * src/math/SquareMatrix3.hpp: using epsilon instead of 0.0 to avoid
4 +        divergence in rotation matrix to quaternion transformation
5 +
6 + 2005-09-28 11:32  gezelter
7 +
8 +        * src/primitives/RigidBody.cpp: Rotation matrix multiplication
9 +        order error
10 +
11 + 2005-09-28 11:32  gezelter
12 +
13 +        * src/io/DumpReader.cpp: tracking down quaternion bug
14 +
15 + 2005-09-28 11:32  gezelter
16 +
17 +        * forceFields/DUFF2.frc: Added DIP atom types for 2-point water
18 +        model
19 +
20 + 2005-09-27 15:02  tim
21 +
22 +        * src/math/SquareMatrix3.hpp: fix a bug in convert rotation matrix
23 +        to quaternion
24 +
25 + 2005-09-26 13:38  chuckv
26 +
27 +        * src/UseTheForce/DarkSide/electrostatic.F90: Added define for ifc
28 +        7 so derfc is external. Other compilers should treat erfc as
29 +        intrinsic.
30 +
31 + 2005-09-26 12:07  chuckv
32 +
33 +        * src/UseTheForce/DarkSide/electrostatic.F90: Changed erfc to derfc
34 +        and declared it to be external to fix issure with ifc7. Hopefully
35 +        this will not cause a problem with other compilers where derfc is
36 +        an intrinsic function.
37 +
38 + 2005-09-26 11:42  chuckv
39 +
40 +        * src/UseTheForce/DarkSide/simulation.F90: MPI fix for SimHasAtype
41 +        in simulation module. We needed a seperate receive buffer.
42 +
43 + 2005-09-26 10:58  chuckv
44 +
45 +        * src/: brains/SimInfo.cpp, io/Globals.cpp, io/Globals.hpp: Added
46 +        support for skinThickness keyword to Globals.
47 +
48 + 2005-09-26 10:56  tim
49 +
50 +        * src/io/DumpReader.cpp: fix a typo in DumpReader
51 +
52 + 2005-09-26 09:27  chrisfen
53 +
54 +        * samples/: minimizer/tip4p_two.md,
55 +        thermoIntegration/liquid/ssde.md, thermoIntegration/solid/ssde.md,
56 +        water/dimer/cl.md, water/dimer/mix.md, water/dimer/mix2.md,
57 +        water/dimer/ssd.md, water/dimer/tap.md, water/dimer/two.md,
58 +        water/spce/spce.md, water/ssd/ssd.md, water/ssd-ion/ssdCl.md,
59 +        water/ssde/ssde.md, water/tap/tap.md, water/tip3p_ice/tp3.md,
60 +        water/tip4p/tp4.md: fixing up some samples
61 +
62 + 2005-09-24 12:39  chrisfen
63 +
64 +        * src/UseTheForce/DarkSide/electrostatic.F90: slowdown fixed - now
65 +        roughly the same speed as the old version when using dipoles
66 +        
67 +        energies are now exactly the same between the old version of OOPSE
68 +        and this version
69 +
70 + 2005-09-24 12:38  chrisfen
71 +
72 +        * samples/water/ssdrf/ssdrf.md: turned rf on
73 +
74 + 2005-09-23 15:31  chuckv
75 +
76 +        * src/UseTheForce/doForces.F90: Fixed "dum-dum" where we ignore the
77 +        skin thickness and hardcode listSkin to be 1.0. We now get listskin
78 +        from skin. This will get fixed to where we can manually set skin
79 +        thickness.
80 +
81 + 2005-09-22 13:50  gezelter
82 +
83 +        * src/math/derfc.F90: added error function
84 +
85 + 2005-09-21 19:08  chuckv
86 +
87 +        * src/integrators/Velocitizer.cpp: Removed print statement for
88 +        angular momentum and inertia tensor from velocitizer.
89 +
90 + 2005-09-21 19:04  chuckv
91 +
92 +        * src/integrators/Velocitizer.cpp: Removed print statements for
93 +        remove angular momentum.
94 +
95 + 2005-09-21 18:45  chuckv
96 +
97 +        * src/UseTheForce/DarkSide/LJ.F90: Bug fix: If we are not using LJ
98 +        (say we are using EAM), we probably shouldn't rebuild the LJ mixing
99 +        map.
100 +
101 + 2005-09-21 15:59  tim
102 +
103 +        * src/io/: DumpReader.cpp, DumpReader.hpp, DumpWriter.cpp:
104 +        DumpReader using pure c++ io
105 +
106 + 2005-09-21 12:20  chrisfen
107 +
108 +        * src/UseTheForce/: doForces.F90, DarkSide/LJ.F90: Fixed a
109 +        defaultCutoff bug (HEMES!)
110 +
111 + 2005-09-20 17:13  gezelter
112 +
113 +        * make/Makefile.in: libz additions
114 +
115 + 2005-09-20 17:03  gezelter
116 +
117 +        * configure, ac-tools/aclocal.m4, ac-tools/configure.in,
118 +        src/config.h.in: added check for zlib in configure
119 +
120 + 2005-09-20 16:22  tim
121 +
122 +        * src/io/: DumpWriter.cpp, DumpWriter.hpp, Makefile, gzstream.cpp,
123 +        gzstream.hpp, zipstream.hpp: adding zlib support for DumpWriter
124 +
125 + 2005-09-20 11:22  tim
126 +
127 +        * test/io/: ZipstreamTestCase.cpp, ZipstreamTestCase.hpp: adding
128 +        testcase for zipstream
129 +
130 + 2005-09-20 10:41  tim
131 +
132 +        * src/io/zipstream.hpp: adding zipstream.hpp
133 +
134 + 2005-09-20 10:34  chrisfen
135 +
136 +        * samples/: dipole/splitInWater.md, dipole/split_SSD.md,
137 +        dipole/twoSplitDipole.md, minimizer/ssdEM.md,
138 +        minimizer/tip4p_two.md, water/ssdrf/ssdrf.md, zcons/zconsFixed.md,
139 +        zcons/zconsMoving.md: fixed up some sample md files
140 +
141 + 2005-09-19 18:21  chrisfen
142 +
143 +        * ChangeLog, samples/water/ssdrf/ssdrf.md,
144 +        src/UseTheForce/doForces.F90,
145 +        src/UseTheForce/DarkSide/electrostatic.F90,
146 +        src/UseTheForce/DarkSide/simulation.F90, src/brains/SimInfo.cpp,
147 +        src/brains/fSimulation.h: Fixed bugs in reaction field, now it
148 +        appears as though it really is working...
149 +
150 + 2005-09-18 15:45  chrisfen
151 +
152 +        * ChangeLog, samples/water/ssdrf/ssdrf.md,
153 +        src/UseTheForce/doForces.F90,
154 +        src/UseTheForce/doForces_interface.F90,
155 +        src/UseTheForce/doForces_interface.h,
156 +        src/UseTheForce/DarkSide/electrostatic.F90,
157 +        src/UseTheForce/DarkSide/electrostatic_interface.h,
158 +        src/brains/SimInfo.cpp: reaction field seems to work now, still
159 +        need to do some testing...
160 +
161 + 2005-09-16 18:04  chuckv
162 +
163 +        * src/io/: Globals.cpp, Globals.hpp: Added keywords for compressed
164 +        dump files.
165 +
166 + 2005-09-16 16:07  chrisfen
167 +
168 +        * src/: UseTheForce/doForces_interface.F90,
169 +        UseTheForce/doForces_interface.h, brains/SimInfo.cpp: xlf found a
170 +        bug that ifc missed...
171 +
172 + 2005-09-16 15:36  chrisfen
173 +
174 +        * src/UseTheForce/: doForces.F90, DarkSide/electrostatic.F90:
175 +        fixing some summation method issues
176 +
177 + 2005-09-16 14:35  chrisfen
178 +
179 +        * src/brains/SimInfo.cpp: fixed a capitalization error
180 +
181 + 2005-09-16 14:34  chrisfen
182 +
183 +        * src/UseTheForce/: fElectrostaticSummationMethod.h,
184 +        DarkSide/fElectrostaticSummationMethod.h: moved a header file
185 +        around
186 +
187 + 2005-09-16 14:00  chrisfen
188 +
189 +        * src/: UseTheForce/DarkSide/electrostatic_interface.F90,
190 +        brains/SimInfo.cpp, brains/SimInfo.hpp: it builds now, but there
191 +        are known issues - particularly with reaction field...
192 +
193 + 2005-09-16 11:07  chrisfen
194 +
195 +        * src/: UseTheForce/DarkSide/electrostatic.F90, brains/SimInfo.cpp,
196 +        io/Globals.cpp, io/Globals.hpp: some fixes but even more breaking
197 +        (cutting out the old way to do reaction field)
198 +
199 + 2005-09-15 17:05  gezelter
200 +
201 +        * src/UseTheForce/: doForces.F90, fCoulombicCorrection.h,
202 +        fElectrostaticSummationMethod.h, DarkSide/electrostatic.F90,
203 +        DarkSide/electrostatic_interface.F90,
204 +        DarkSide/electrostatic_interface.h: Working on adding WOLF
205 +
206 + 2005-09-15 14:17  tim
207 +
208 +        * src/io/DumpReader.cpp: Fix a bug in DumpReader in case readFrame
209 +        is called without calling getNFrames
210 +
211 + 2005-09-15 08:47  chrisfen
212 +
213 +        * src/UseTheForce/fCoulombicCorrection.h: forgot to add a header
214 +
215 + 2005-09-14 21:48  chuckv
216 +
217 +        * src/UseTheForce/doForces.F90: Fixed bug where gtypeMaxCutoff was
218 +        not initialized after creation. When maxval(gtypeMaxCutoff) was
219 +        called, the largest random garbage value was returned from the
220 +        array.
221 +
222 + 2005-09-14 19:14  chrisfen
223 +
224 +        * src/: brains/SimInfo.cpp, brains/SimInfo.hpp, io/Globals.cpp,
225 +        io/Globals.hpp: changes to include the coulombicCorrection selector
226 +
227 + 2005-09-14 19:13  chrisfen
228 +
229 +        * src/UseTheForce/DarkSide/: Makefile, electrostatic.F90,
230 +        reactionField.F90: added in the undamped wolf, in the process of
231 +        doing the damped wolf
232 +
233 + 2005-09-14 19:13  chrisfen
234 +
235 +        * src/UseTheForce/: doForces.F90, doForces_interface.F90,
236 +        doForces_interface.h, notifyCutoffs.F90: some changes to activate
237 +        the coulombicCorrection selector
238 +
239 + 2005-09-14 19:11  chrisfen
240 +
241 +        * samples/water/dimer/: cl.in, cl.md, water.md: just some testing
242 +
243 + 2005-09-14 19:11  chrisfen
244 +
245 +        * samples/argon/: 500.in, 500.md: Equilibrated the sample
246 +
247 + 2005-09-14 19:10  chrisfen
248 +
249 +        * forceFields/DUFF2.frc: re-added Cl- and Na+
250 +
251 + 2005-09-14 15:31  chuckv
252 +
253 +        * src/UseTheForce/DarkSide/eam.F90: EAM now uses eamlist to lookup
254 +        eamAtypes instead of assuming a 1-1 correspondence to atypes.
255 +
256 + 2005-09-14 15:28  gezelter
257 +
258 +        * src/UseTheForce/doForces.F90: fix to put back calculation of r in
259 +        do_prepair
260 +
261 + 2005-09-14 14:02  gezelter
262 +
263 +        * src/UseTheForce/DarkSide/LJ.F90: fixed a bug in the
264 +        createMixingMap routine.  It should now set doShift correctly
265 +
266 + 2005-09-07 17:44  chuckv
267 +
268 +        * src/UseTheForce/doForces.F90: Added nGroupsInRow for mpi build.
269 +
270 + 2005-09-07 17:23  chuckv
271 +
272 +        * src/UseTheForce/DarkSide/simParallel.F90: Added access to mpi
273 +        logical variables
274 +
275 + 2005-09-07 17:08  gezelter
276 +
277 +        * src/UseTheForce/doForces.F90: bugfix on the grouptype finding
278 +        algorithm
279 +
280 + 2005-09-07 15:46  gezelter
281 +
282 +        * src/: UseTheForce/doForces.F90,
283 +        UseTheForce/doForces_interface.F90, UseTheForce/notifyCutoffs.F90,
284 +        UseTheForce/notifyCutoffs_interface.F90,
285 +        UseTheForce/notifyCutoffs_interface.h, brains/SimInfo.cpp,
286 +        io/Globals.cpp, io/Globals.hpp: adding c-side interface to change
287 +        cutoff Policy
288 +
289 + 2005-09-07 14:18  gezelter
290 +
291 +        * src/UseTheForce/doForces.F90: Some bug hunting
292 +
293 + 2005-09-07 14:18  gezelter
294 +
295 +        * samples/argon/argonNVT.md: Just a longer test
296 +
297 + 2005-09-06 12:32  chuckv
298 +
299 +        * src/UseTheForce/doForces.F90: Added allocation for gtypeCutoffmap
300 +        etc..
301 +
302 + 2005-09-01 17:56  gezelter
303 +
304 +        * src/UseTheForce/doForces.F90: initialized atomTypeMaxCutoff(i) to
305 +        zero
306 +
307 + 2005-09-01 15:17  gezelter
308 +
309 +        * src/UseTheForce/: doForces.F90, doForces_interface.F90: wrote
310 +        createGtypeCutoffMap
311 +
312 + 2005-08-30 13:23  chrisfen
313 +
314 +        * src/: UseTheForce/doForces.F90,
315 +        UseTheForce/doForces_interface.F90,
316 +        UseTheForce/doForces_interface.h,
317 +        UseTheForce/DarkSide/electrostatic.F90,
318 +        UseTheForce/DarkSide/gb.F90, brains/SimInfo.cpp,
319 +        brains/fSimulation.h, io/Globals.cpp, io/Globals.hpp: made some
320 +        changes for implementing the wolf potential
321 +
322 + 2005-08-26 17:39  chrisfen
323 +
324 +        * src/UseTheForce/DarkSide/eam.F90: updated getEAMCut
325 +
326 + 2005-08-26 16:30  chrisfen
327 +
328 +        * src/UseTheForce/: doForces.F90, DarkSide/eam.F90,
329 +        DarkSide/gb.F90, DarkSide/shapes.F90, DarkSide/sticky.F90: added
330 +        some probably nonfunctional get*cut routines
331 +
332 + 2005-08-26 15:34  chuckv
333 +
334 +        * src/UseTheForce/DarkSide/eam.F90: Added eamType map to atid map.
335 +
336 + 2005-08-26 11:36  gezelter
337 +
338 +        * src/UseTheForce/doForces.F90: fixing some of the problems in the
339 +        interactionHash and gtypeCutoff routines
340 +
341 + 2005-08-17 10:26  gezelter
342 +
343 +        * src/UseTheForce/: doForces.F90, fCutoffPolicy.h,
344 +        DarkSide/simulation.F90: added fCutoffPolicy.h
345 +
346 + 2005-08-11 16:04  gezelter
347 +
348 +        * src/UseTheForce/: doForces.F90, notifyCutoffs.F90: breakage in
349 +        progress
350 +
351 + 2005-08-10 14:17  gezelter
352 +
353 +        * src/primitives/StuntDouble.hpp: putting spaceballs back where
354 +        they belong
355 +
356 + 2005-08-09 17:33  gezelter
357 +
358 +        * src/UseTheForce/DarkSide/LJ.F90: Complete rewrite of Lennard
359 +        Jones module
360 +
361 + 2005-08-09 17:33  gezelter
362 +
363 +        * src/UseTheForce/doForces.F90: Breaky Breaky BREAKY breaky breaky
364 +
365 + 2005-08-09 14:40  chuckv
366 +
367 +        * src/UseTheForce/doForces.F90: In process of re-write for group
368 +        based cutoff....
369 +
370 + 2005-07-29 14:38  gezelter
371 +
372 +        * src/UseTheForce/doForces.F90: fixes in progress
373 +
374 + 2005-07-29 12:34  tim
375 +
376 +        * src/UseTheForce/doForces.F90: fix a bug which does not update
377 +        me_i and me_j correctly
378 +
379 + 2005-07-28 17:12  chuckv
380 +
381 +        * src/UseTheForce/: doForces.F90, notifyCutoffs.F90: Changed
382 +        cutoffs... Segfaults nicely now...
383 +
384 + 2005-07-20 12:04  gezelter
385 +
386 +        * configure, ac-tools/aclocal.m4: fixed ACX_MPI to ignore some text
387 +        error messages from pathscale compiler
388 +
389 + 2005-07-13 11:48  tim
390 +
391 +        * src/applications/staticProps/DensityPlot.cpp: std::bind2nd is in
392 +        <functional>
393 +
394 + 2005-07-13 10:54  tim
395 +
396 +        * src/: UseTheForce/fSwitchingFunction.h,
397 +        UseTheForce/mpiComponentPlan.h,
398 +        UseTheForce/DarkSide/fInteractionMap.h, brains/fSimulation.h,
399 +        io/BASS_interface.h, io/BASS_parse.c, io/BASS_parse.h,
400 +        io/BASSlex.l, io/BASSyacc.y, io/interface.c, io/make_nodes.c,
401 +        io/mpiBASS.c, io/mpiBASS.h, io/node_list.h, io/parse_tree.c,
402 +        io/parse_tree.h, math/MatVec3.c, utils/residentMem.c,
403 +        utils/simError.c, utils/simError.h: replace c++ style comment in c
404 +        files
405 +
406 + 2005-07-03 15:53  chuckv
407 +
408 +        * src/: UseTheForce/doForces.F90, UseTheForce/notifyCutoffs.F90,
409 +        UseTheForce/DarkSide/simulation.F90, utils/oopseMPI.F90: Added
410 +        subroutine to set cuttoff for Interaction map and function in
411 +        simulation.F90 to determine if a particular atype is present in a
412 +        simulation.
413 +
414 + 2005-06-28 08:58  gezelter
415 +
416 +        * src/UseTheForce/doForces.F90: [no log message]
417 +
418 + 2005-06-27 17:21  chuckv
419 +
420 +        * src/UseTheForce/doForces.F90: More breaking and destruction of
421 +        force code. Does not build at this point...
422 +
423 + 2005-06-27 16:01  gezelter
424 +
425 +        * src/: UseTheForce/doForces.F90, UseTheForce/DarkSide/atype.F90,
426 +        UseTheForce/DarkSide/fInteractionMap.h,
427 +        UseTheForce/DarkSide/interactions.F90, utils/definitions.F90:
428 +        Breaky breaky!
429 +
430 + 2005-06-20 11:03  gezelter
431 +
432 +        * samples/water/ssd/ssd.md,
433 +        src/applications/staticProps/DensityPlot.cpp: fixed a bug and ran a
434 +        simulation
435 +
436 + 2005-06-13 13:25  tim
437 +
438 +        * src/: applications/staticProps/DensityPlot.cpp,
439 +        applications/staticProps/DensityPlot.hpp,
440 +        applications/staticProps/SCDOrderParameter.cpp,
441 +        applications/staticProps/StaticProps.cpp,
442 +        io/AtomTypesSectionParser.cpp: working version of DensityPlot
443 +
444 + 2005-05-31 17:31  chuckv
445 +
446 +        * src/: brains/SimInfo.cpp, integrators/Velocitizer.cpp: Changes to
447 +        remove angular momentum.
448 +
449 + 2005-05-31 12:34  chuckv
450 +
451 +        * src/applications/nanoRodBuilder/nanorodBuilder.cpp: Fixed bug in
452 +        typo in nanorodBuilder.
453 +
454 + 2005-05-30 09:01  chuckv
455 +
456 +        * src/: applications/nanoRodBuilder/nanorodBuilder.cpp,
457 +        brains/SimInfo.cpp, brains/SimInfo.hpp, brains/Stats.cpp,
458 +        brains/Stats.hpp, integrators/Velocitizer.cpp,
459 +        integrators/Velocitizer.hpp: Added method to remove system angular
460 +        momentum to velocitizer and added method to calculate system
461 +        angular momentum to siminfo.
462 +
463 + 2005-05-29 16:16  chrisfen
464 +
465 +        * src/UseTheForce/DarkSide/: electrostatic.F90, sticky.F90: Removed
466 +        balance from the Darkside (files)
467 +
468 + 2005-05-29 16:15  chrisfen
469 +
470 +        * src/UseTheForce/doForces.F90: Removed balance from doForces
471 +
472 + 2005-05-29 16:15  chrisfen
473 +
474 +        * samples/water/tap/: tap.in, tap.md: Updated tap sample
475 +
476 + 2005-05-29 16:15  chrisfen
477 +
478 +        * samples/water/dimer/: Makefile, tap.in, tap.md: Included a tap
479 +        dimer for testing purposes
480 +
481 + 2005-05-29 16:14  chrisfen
482 +
483 +        * forceFields/DUFF2.frc: Re-entered the TIP4P-Ew water model. It
484 +        was apparently wiped earlier this month...
485 +
486 + 2005-05-29 16:13  chrisfen
487 +
488 +        * ChangeLog: ran make cvslog
489 +
490 + 2005-05-28 19:16  tim
491 +
492 +        * src/visitors/: AtomNameVisitor.cpp, AtomNameVisitor.hpp: adding
493 +        AtomNameVisitor
494 +
495 + 2005-05-28 19:09  tim
496 +
497 +        * src/integrators/Integrator.cpp: dding resetIntegrator
498 +
499 + 2005-05-28 19:06  tim
500 +
501 +        * src/integrators/: Integrator.cpp, Integrator.hpp, NPT.cpp,
502 +        NPT.hpp, NPTi.cpp, NPTi.hpp, NVT.cpp, NVT.hpp,
503 +        VelocityVerletIntegrator.cpp, VelocityVerletIntegrator.hpp: adding
504 +        resetIntegrator
505 +
506 + 2005-05-27 16:11  tim
507 +
508 +        * src/applications/staticProps/: DensityPlot.cpp, DensityPlot.hpp,
509 +        Makefile, P2OrderParameter.cpp, SCDOrderParameter.cpp,
510 +        SCDOrderParameter.hpp, StaticProps.cpp, StaticProps.ggo,
511 +        StaticPropsCmd.c, StaticPropsCmd.h: adding DensityPlot into
512 +        StaticProps
513 +
514 + 2005-05-26 23:41  tim
515 +
516 +        * src/: applications/staticProps/Makefile,
517 +        applications/staticProps/P2OrderParameter.cpp,
518 +        applications/staticProps/P2OrderParameter.hpp,
519 +        applications/staticProps/StaticProps.cpp,
520 +        applications/staticProps/StaticProps.ggo,
521 +        applications/staticProps/StaticPropsCmd.c,
522 +        applications/staticProps/StaticPropsCmd.h, utils/StringUtils.cpp,
523 +        utils/StringUtils.hpp: adding SCDOrderParameter into StaticProps
524 +
525 + 2005-05-26 17:45  tim
526 +
527 +        * src/: applications/dump2Xyz/Dump2XYZ.cpp,
528 +        applications/dump2Xyz/Dump2XYZCmd.c,
529 +        applications/dump2Xyz/Dump2XYZCmd.h,
530 +        applications/staticProps/Makefile,
531 +        applications/staticProps/P2OrderParameter.cpp,
532 +        applications/staticProps/P2OrderParameter.hpp,
533 +        applications/staticProps/RadialDistrFunc.cpp,
534 +        applications/staticProps/RadialDistrFunc.hpp,
535 +        applications/staticProps/StaticAnalyser.hpp,
536 +        applications/staticProps/StaticProps.cpp,
537 +        applications/staticProps/StaticProps.ggo,
538 +        applications/staticProps/StaticPropsCmd.c,
539 +        applications/staticProps/StaticPropsCmd.h, visitors/Makefile,
540 +        visitors/OtherVisitor.cpp, visitors/OtherVisitor.hpp: adding
541 +        AtomNameVisitor to convert atom name to its base name;
542 +        wrappingvisitor now wrap back to the center of the mass; adding
543 +        P2OrderParameter into StaticProps
544 +
545 + 2005-05-22 16:36  chuckv
546 +
547 +        * samples/metals/nanorod/Au_nanoparticle_FCC.md,
548 +        src/applications/nanoRodBuilder/Geometry.cpp,
549 +        src/applications/nanoRodBuilder/GeometryBuilder.cpp,
550 +        src/applications/nanoRodBuilder/GeometryFactory.cpp,
551 +        src/applications/nanoRodBuilder/GeometryFactory.hpp,
552 +        src/applications/nanoRodBuilder/nanorodBuilder.cpp,
553 +        src/integrators/VelocityVerletIntegrator.cpp: Fix to print pressure
554 +        tensor.
555 +
556 + 2005-05-22 16:05  tim
557 +
558 +        * src/: brains/Stats.cpp, brains/Stats.hpp, brains/Thermo.cpp,
559 +        integrators/VelocityVerletIntegrator.cpp, io/Globals.cpp,
560 +        io/Globals.hpp, io/SectionParserManager.cpp: adding keyword
561 +        printPressureTensor
562 +
563 + 2005-05-20 14:27  tim
564 +
565 +        * src/integrators/NPrT.cpp: NPrT in progress
566 +
567 + 2005-05-20 11:01  tim
568 +
569 +        * src/: integrators/NPrT.cpp, io/Globals.cpp,
570 +        utils/OOPSEConstant.hpp: NPrT in progress
571 +
572 + 2005-05-19 16:31  tim
573 +
574 +        * src/: brains/Thermo.cpp, brains/Thermo.hpp, integrators/NPAT.cpp,
575 +        integrators/NPrT.cpp, integrators/NPrT.hpp, io/Globals.cpp,
576 +        io/Globals.hpp: NPAT is working
577 +
578 + 2005-05-19 10:49  tim
579 +
580 +        * src/: UseTheForce/DarkSide/LJ.F90, integrators/Makefile,
581 +        integrators/NPrT.cpp, io/Globals.cpp: fix bug in NPAT and NPrT
582 +
583 + 2005-05-18 23:28  tim
584 +
585 +        * src/: brains/Register.cpp, integrators/NPAT.cpp,
586 +        integrators/NPAT.hpp, integrators/NPrT.cpp, integrators/NPrT.hpp,
587 +        io/Globals.cpp, io/Globals.hpp: adding NPAT and NPrT integrators
588 +
589 + 2005-05-18 14:06  chrisfen
590 +
591 +        * forceFields/DUFF2.frc, src/UseTheForce/DarkSide/sticky.F90: just
592 +        some tap changes
593 +
594 + 2005-05-18 13:31  chrisfen
595 +
596 +        * src/UseTheForce/: doForces.F90, DarkSide/electrostatic.F90,
597 +        DarkSide/sticky.F90: Modifications to temper the dipolar strength
598 +        in the first solvation shell for tap
599 +
600 + 2005-05-18 07:35  chrisfen
601 +
602 +        * samples/water/tap/: tap.in, tap.md, water.md: added a tap example
603 +        for testing purposes
604 +
605 + 2005-05-17 17:35  chrisfen
606 +
607 +        * ChangeLog, forceFields/DUFF2.frc, samples/water/dimer/ssd.md,
608 +        samples/water/dimer/water.md, src/UseTheForce/DUFF.cpp,
609 +        src/UseTheForce/doForces.F90,
610 +        src/UseTheForce/DarkSide/electrostatic.F90,
611 +        src/UseTheForce/DarkSide/electrostatic_interface.F90,
612 +        src/UseTheForce/DarkSide/sticky.F90: Modifications to tap.  Also
613 +        correcting changes to the previous merge that were not caught
614 +
615   2005-05-16 23:20  chuckv
616  
617          * src/types/: DirectionalAtomType.cpp, DirectionalAtomType.hpp:

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