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root/group/trunk/OOPSE-4/forceFields/Amber.99.frc
Revision: 3425
Committed: Tue Jul 1 13:29:02 2008 UTC (16 years, 1 month ago) by gezelter
File size: 100702 byte(s)
Log Message:
Adding infrastructure for Amber force field

File Contents

# User Rev Content
1 gezelter 3425 // This is the forcefield file generated from amber99.prm
2     //
3     // The sections are divided into AtomTypes
4     //
5    
6    
7     begin BaseAtomTypes
8     //number name mass (amu)
9     CT 12.01
10     C 12.01
11     CA 12.01
12     CM 12.01
13     CC 12.01
14     CV 12.01
15     CW 12.01
16     CR 12.01
17     CB 12.01
18     C* 12.01
19     CN 12.01
20     CK 12.01
21     CQ 12.01
22     N 14.01
23     NA 14.01
24     NB 14.01
25     NC 14.01
26     N* 14.01
27     N2 14.01
28     N3 14.01
29     OW 16.0
30     OH 16.0
31     OS 16.0
32     O 16.0
33     O2 16.0
34     S 32.06
35     SH 32.06
36     P 30.97
37     H 1.008
38     HW 1.008
39     HO 1.008
40     HS 1.008
41     HA 1.008
42     HC 1.008
43     H1 1.008
44     H2 1.008
45     H3 1.008
46     HP 1.008
47     H4 1.008
48     H5 1.008
49     Li+ 6.940
50     Na+ 22.990
51     K+ 39.100
52     Rb+ 85.470
53     Cs+ 132.910
54     Mg+ 24.305
55     Ca+ 40.080
56     Zn+ 65.400
57     Cl- 35.450
58     end BaseAtomTypes
59    
60    
61     begin AtomTypes
62     //name baseatomtype
63     GLY-N N
64     GLY-CA CT
65     GLY-C C
66     GLY-HN H
67     GLY-O O
68     GLY-HA H1
69     ALA-N N
70     ALA-CA CT
71     ALA-C C
72     ALA-HN H
73     ALA-O O
74     ALA-HA H1
75     ALA-CB CT
76     ALA-HB HC
77     VAL-N N
78     VAL-CA CT
79     VAL-C C
80     VAL-HN H
81     VAL-O O
82     VAL-HA H1
83     VAL-CB CT
84     VAL-HB HC
85     VAL-CG1 CT
86     VAL-HG1 HC
87     VAL-CG2 CT
88     VAL-HG2 HC
89     LEU-N N
90     LEU-CA CT
91     LEU-C C
92     LEU-HN H
93     LEU-O O
94     LEU-HA H1
95     LEU-CB CT
96     LEU-HB HC
97     LEU-CG CT
98     LEU-HG HC
99     LEU-CD1 CT
100     LEU-HD1 HC
101     LEU-CD2 CT
102     LEU-HD2 HC
103     ILE-N N
104     ILE-CA CT
105     ILE-C C
106     ILE-HN H
107     ILE-O O
108     ILE-HA H1
109     ILE-CB CT
110     ILE-HB HC
111     ILE-CG1 CT
112     ILE-HG1 HC
113     ILE-CG2 CT
114     ILE-HG2 HC
115     ILE-CD CT
116     ILE-HD HC
117     SER-N N
118     SER-CA CT
119     SER-C C
120     SER-HN H
121     SER-O O
122     SER-HA H1
123     SER-CB CT
124     SER-HB H1
125     SER-OG OH
126     SER-HG HO
127     THR-N N
128     THR-CA CT
129     THR-C C
130     THR-HN H
131     THR-O O
132     THR-HA H1
133     THR-CB CT
134     THR-HB H1
135     THR-OG1 OH
136     THR-HG1 HO
137     THR-CG2 CT
138     THR-HG2 HC
139     CYS-N N
140     CYS-CA CT
141     CYS-C C
142     CYS-HN H
143     CYS-O O
144     CYS-HA H1
145     CYS-CB CT
146     CYS-HB H1
147     CYS-SG SH
148     CYS-HG HS
149     CYX-N N
150     CYX-CA CT
151     CYX-C C
152     CYX-HN H
153     CYX-O O
154     CYX-HA H1
155     CYX-CB CT
156     CYX-HB H1
157     CYX-SG S
158     PRO-N N
159     PRO-CA CT
160     PRO-C C
161     PRO-O O
162     PRO-HA H1
163     PRO-CB CT
164     PRO-HB HC
165     PRO-CG CT
166     PRO-HG HC
167     PRO-CD CT
168     PRO-HD H1
169     PHE-N N
170     PHE-CA CT
171     PHE-C C
172     PHE-HN H
173     PHE-O O
174     PHE-HA H1
175     PHE-CB CT
176     PHE-HB HC
177     PHE-CG CA
178     PHE-CD CA
179     PHE-HD HA
180     PHE-CE CA
181     PHE-HE HA
182     PHE-CZ CA
183     PHE-HZ HA
184     TYR-N N
185     TYR-CA CT
186     TYR-C C
187     TYR-HN H
188     TYR-O O
189     TYR-HA H1
190     TYR-CB CT
191     TYR-HB HC
192     TYR-CG CA
193     TYR-CD CA
194     TYR-HD HA
195     TYR-CE CA
196     TYR-HE HA
197     TYR-CZ CA
198     TYR-OH OH
199     TYR-HH HO
200     TRP-N N
201     TRP-CA CT
202     TRP-C C
203     TRP-HN H
204     TRP-O O
205     TRP-HA H1
206     TRP-CB CT
207     TRP-HB HC
208     TRP-CG C*
209     TRP-CD1 CW
210     TRP-HD1 H4
211     TRP-CD2 CB
212     TRP-NE1 NA
213     TRP-HE1 H
214     TRP-CE2 CN
215     TRP-CE3 CA
216     TRP-HE3 HA
217     TRP-CZ2 CA
218     TRP-HZ2 HA
219     TRP-CZ3 CA
220     TRP-HZ3 HA
221     TRP-CH2 CA
222     TRP-HH2 HA
223     HIS-N N
224     HIS-CA CT
225     HIS-C C
226     HIS-HN H
227     HIS-O O
228     HIS-HA H1
229     HIS-CB CT
230     HIS-HB HC
231     HIS-CG CC
232     HIS-ND1 NA
233     HIS-HD1 H
234     HIS-CD2 CW
235     HIS-HD2 H4
236     HIS-CE1 CR
237     HIS-HE1 H5
238     HIS-NE2 NA
239     HIS-HE2 H
240     HID-N N
241     HID-CA CT
242     HID-C C
243     HID-HN H
244     HID-O O
245     HID-HA H1
246     HID-CB CT
247     HID-HB HC
248     HID-CG CC
249     HID-ND1 NA
250     HID-HD1 H
251     HID-CD2 CV
252     HID-HD2 H4
253     HID-CE1 CR
254     HID-HE1 H5
255     HID-NE2 NB
256     HIE-N N
257     HIE-CA CT
258     HIE-C C
259     HIE-HN H
260     HIE-O O
261     HIE-HA H1
262     HIE-CB CT
263     HIE-HB HC
264     HIE-CG CC
265     HIE-ND1 NB
266     HIE-CD2 CW
267     HIE-HD2 H4
268     HIE-CE1 CR
269     HIE-HE1 H5
270     HIE-NE2 NA
271     HIE-HE2 H
272     ASP-N N
273     ASP-CA CT
274     ASP-C C
275     ASP-HN H
276     ASP-O O
277     ASP-HA H1
278     ASP-CB CT
279     ASP-HB HC
280     ASP-CG C
281     ASP-OD O2
282     ASN-N N
283     ASN-CA CT
284     ASN-C C
285     ASN-HN H
286     ASN-O O
287     ASN-HA H1
288     ASN-CB CT
289     ASN-HB HC
290     ASN-CG C
291     ASN-OD1 O
292     ASN-ND2 N
293     ASN-HD2 H
294     GLU-N N
295     GLU-CA CT
296     GLU-C C
297     GLU-HN H
298     GLU-O O
299     GLU-HA H1
300     GLU-CB CT
301     GLU-HB HC
302     GLU-CG CT
303     GLU-HG HC
304     GLU-CD C
305     GLU-OE O2
306     GLN-N N
307     GLN-CA CT
308     GLN-C C
309     GLN-HN H
310     GLN-O O
311     GLN-HA H1
312     GLN-CB CT
313     GLN-HB HC
314     GLN-CG CT
315     GLN-HG HC
316     GLN-CD C
317     GLN-OE1 O
318     GLN-NE2 N
319     GLN-HE2 H
320     MET-N N
321     MET-CA CT
322     MET-C C
323     MET-HN H
324     MET-O O
325     MET-HA H1
326     MET-CB CT
327     MET-HB HC
328     MET-CG CT
329     MET-HG H1
330     MET-SD S
331     MET-CE CT
332     MET-HE H1
333     LYS-N N
334     LYS-CA CT
335     LYS-C C
336     LYS-HN H
337     LYS-O O
338     LYS-HA H1
339     LYS-CB CT
340     LYS-HB HC
341     LYS-CG CT
342     LYS-HG HC
343     LYS-CD CT
344     LYS-HD HC
345     LYS-CE CT
346     LYS-HE HP
347     LYS-NZ N3
348     LYS-HZ H
349     ARG-N N
350     ARG-CA CT
351     ARG-C C
352     ARG-HN H
353     ARG-O O
354     ARG-HA H1
355     ARG-CB CT
356     ARG-HB HC
357     ARG-CG CT
358     ARG-HG HC
359     ARG-CD CT
360     ARG-HD H1
361     ARG-NE N2
362     ARG-HE H
363     ARG-CZ CA
364     ARG-NH N2
365     ARG-HH H
366     ORN-N N
367     ORN-CA CT
368     ORN-C C
369     ORN-HN H
370     ORN-O O
371     ORN-HA H1
372     ORN-CB CT
373     ORN-HB HC
374     ORN-CG CT
375     ORN-HG HC
376     ORN-CD CT
377     ORN-HD HP
378     ORN-NE N3
379     ORN-HE H
380     MAA-N N
381     MAA-CA CT
382     MAA-C C
383     MAA-HN H
384     MAA-O O
385     MAA-CB CT
386     MAA-HB HC
387     PCA-N N
388     PCA-CA CT
389     PCA-C C
390     PCA-HN H
391     PCA-O O
392     PCA-HA H1
393     PCA-CB CT
394     PCA-HB HC
395     PCA-CG CT
396     PCA-HG HC
397     PCA-CD C
398     PCA-OE O
399     FOR-C C
400     FOR-H H
401     FOR-O O
402     ACE-CA CT
403     ACE-HA HC
404     ACE-C C
405     ACE-O O
406     C-Term N
407     C-Term H
408     N-MeAmide N
409     N-MeAmide H
410     N-MeAmide CT
411     N-MeAmide H1
412     NGLY-N N3
413     NGLY-CA CT
414     NGLY-C C
415     NGLY-HN H
416     NGLY-O O
417     NGLY-HA H1
418     NALA-N N3
419     NALA-CA CT
420     NALA-C C
421     NALA-HN H
422     NALA-O O
423     NALA-HA H1
424     NVAL-N N3
425     NVAL-CA CT
426     NVAL-C C
427     NVAL-HN H
428     NVAL-O O
429     NVAL-HA H1
430     NLEU-N N3
431     NLEU-CA CT
432     NLEU-C C
433     NLEU-HN H
434     NLEU-O O
435     NLEU-HA H1
436     NILE-N N3
437     NILE-CA CT
438     NILE-C C
439     NILE-HN H
440     NILE-O O
441     NILE-HA H1
442     NSER-N N3
443     NSER-CA CT
444     NSER-C C
445     NSER-HN H
446     NSER-O O
447     NSER-HA H1
448     NTHR-N N3
449     NTHR-CA CT
450     NTHR-C C
451     NTHR-HN H
452     NTHR-O O
453     NTHR-HA H1
454     NCYS-N N3
455     NCYS-CA CT
456     NCYS-C C
457     NCYS-HN H
458     NCYS-O O
459     NCYS-HA H1
460     NCYX-N N3
461     NCYX-CA CT
462     NCYX-C C
463     NCYX-HN H
464     NCYX-O O
465     NCYX-HA H1
466     NPRO-N N3
467     NPRO-CA CT
468     NPRO-C C
469     NPRO-HN H
470     NPRO-O O
471     NPRO-HA H1
472     NPRO-CD CT
473     NPRO-HD HP
474     NPHE-N N3
475     NPHE-CA CT
476     NPHE-C C
477     NPHE-HN H
478     NPHE-O O
479     NPHE-HA H1
480     NTYR-N N3
481     NTYR-CA CT
482     NTYR-C C
483     NTYR-HN H
484     NTYR-O O
485     NTYR-HA H1
486     NTRP-N N3
487     NTRP-CA CT
488     NTRP-C C
489     NTRP-HN H
490     NTRP-O O
491     NTRP-HA H1
492     NHIS-N N3
493     NHIS-CA CT
494     NHIS-C C
495     NHIS-HN H
496     NHIS-O O
497     NHIS-HA H1
498     NHID-N N3
499     NHID-CA CT
500     NHID-C C
501     NHID-HN H
502     NHID-O O
503     NHID-HA H1
504     NHIE-N N3
505     NHIE-CA CT
506     NHIE-C C
507     NHIE-HN H
508     NHIE-O O
509     NHIE-HA H1
510     NASP-N N3
511     NASP-CA CT
512     NASP-C C
513     NASP-HN H
514     NASP-O O
515     NASP-HA H1
516     NASN-N N3
517     NASN-CA CT
518     NASN-C C
519     NASN-HN H
520     NASN-O O
521     NASN-HA H1
522     NGLU-N N3
523     NGLU-CA CT
524     NGLU-C C
525     NGLU-HN H
526     NGLU-O O
527     NGLU-HA H1
528     NCLN-N N3
529     NCLN-CA CT
530     NCLN-C C
531     NCLN-HN H
532     NCLN-O O
533     NCLN-HA H1
534     NMET-N N3
535     NMET-CA CT
536     NMET-C C
537     NMET-HN H
538     NMET-O O
539     NMET-HA H1
540     NLYS-N N3
541     NLYS-CA CT
542     NLYS-C C
543     NLYS-HN H
544     NLYS-O O
545     NLYS-HA H1
546     NARG-N N3
547     NARG-CA CT
548     NARG-C C
549     NARG-HN H
550     NARG-O O
551     NARG-HA H1
552     NORN-N N3
553     NORN-CA CT
554     NORN-C C
555     NORN-HN H
556     NORN-O O
557     NORN-HA H1
558     NAIB-N N3
559     NAIB-CA CT
560     NAIB-C C
561     NAIB-HN H
562     NAIB-O O
563     CGLY-N N
564     CGLY-CA CT
565     CGLY-C C
566     CGLY-HN H
567     CGLY-OXT O2
568     CGLY-HA H1
569     CALA-N N
570     CALA-CA CT
571     CALA-C C
572     CALA-HN H
573     CALA-OXT O2
574     CALA-HA H1
575     CVAL-N N
576     CVAL-CA CT
577     CVAL-C C
578     CVAL-HN H
579     CVAL-OXT O2
580     CVAL-HA H1
581     CLEU-N N
582     CLEU-CA CT
583     CLEU-C C
584     CLEU-HN H
585     CLEU-OXT O2
586     CLEU-HA H1
587     CILE-N N
588     CILE-CA CT
589     CILE-C C
590     CILE-HN H
591     CILE-OXT O2
592     CILE-HA H1
593     CSER-N N
594     CSER-CA CT
595     CSER-C C
596     CSER-HN H
597     CSER-OXT O2
598     CSER-HA H1
599     CTHR-N N
600     CTHR-CA CT
601     CTHR-C C
602     CTHR-HN H
603     CTHR-OXT O2
604     CTHR-HA H1
605     CCYS-N N
606     CCYS-CA CT
607     CCYS-C C
608     CCYS-HN H
609     CCYS-OXT O2
610     CCYS-HA H1
611     CCYX-N N
612     CCYX-CA CT
613     CCYX-C C
614     CCYX-HN H
615     CCYX-OXT O2
616     CCYX-HA H1
617     CPRO-N N
618     CPRO-CA CT
619     CPRO-C C
620     CPRO-OXT O2
621     CPRO-HA H1
622     CPHE-N N
623     CPHE-CA CT
624     CPHE-C C
625     CPHE-HN H
626     CPHE-OXT O2
627     CPHE-HA H1
628     CTYR-N N
629     CTYR-CA CT
630     CTYR-C C
631     CTYR-HN H
632     CTYR-OXT O2
633     CTYR-HA H1
634     CTRP-N N
635     CTRP-CA CT
636     CTRP-C C
637     CTRP-HN H
638     CTRP-OXT O2
639     CTRP-HA H1
640     CHIS-N N
641     CHIS-CA CT
642     CHIS-C C
643     CHIS-HN H
644     CHIS-OXT O2
645     CHIS-HA H1
646     CHID-N N
647     CHID-CA CT
648     CHID-C C
649     CHID-HN H
650     CHID-OXT O2
651     CHID-HA H1
652     CHIE-N N
653     CHIE-CA CT
654     CHIE-C C
655     CHIE-HN H
656     CHIE-OXT O2
657     CHIE-HA H1
658     CASP-N N
659     CASP-CA CT
660     CASP-C C
661     CASP-HN H
662     CASP-OXT O2
663     CASP-HA H1
664     CASN-N N
665     CASN-CA CT
666     CASN-C C
667     CASN-HN H
668     CASN-OXT O2
669     CASN-HA H1
670     CGLU-N N
671     CGLU-CA CT
672     CGLU-C C
673     CGLU-HN H
674     CGLU-OXT O2
675     CGLU-HA H1
676     CGLN-N N
677     CGLN-CA CT
678     CGLN-C C
679     CGLN-HN H
680     CGLN-OXT O2
681     CGLN-HA H1
682     CMET-N N
683     CMET-CA CT
684     CMET-C C
685     CMET-HN H
686     CMET-OXT O2
687     CMET-HA H1
688     CLYS-N N
689     CLYS-CA CT
690     CLYS-C C
691     CLYS-HN H
692     CLYS-OXT O2
693     CLYS-HA H1
694     CARG-N N
695     CARG-CA CT
696     CARG-C C
697     CARG-HN H
698     CARG-OXT O2
699     CARG-HA H1
700     CORN-N N
701     CORN-CA CT
702     CORN-C C
703     CORN-HN H
704     CORN-OXT O2
705     CORN-HA H1
706     CAIB-N N
707     CAIB-CA CT
708     CAIB-C C
709     CAIB-HN H
710     CAIB-OXT O2
711     RA-O5' OS
712     RA-C5' CT
713     RA-H5'1 H1
714     RA-H5'2 H1
715     RA-C4' CT
716     RA-H4' H1
717     RA-O4' OS
718     RA-C1' CT
719     RA-H1' H2
720     RA-C3' CT
721     RA-H3' H1
722     RA-C2' CT
723     RA-H2'1 H1
724     RA-O2' OH
725     RA-HO'2 HO
726     RA-O3' OS
727     RA-N9 N*
728     RA-C4 CB
729     RA-C5 CB
730     RA-N7 NB
731     RA-C8 CK
732     RA-N3 NC
733     RA-C2 CQ
734     RA-N1 NC
735     RA-C6 CA
736     RA-H2 H5
737     RA-N6 N2
738     RA-H61 H
739     RA-H62 H
740     RA-H8 H5
741     RG-O5' OS
742     RG-C5' CT
743     RG-H5'1 H1
744     RG-H5'2 H1
745     RG-C4' CT
746     RG-H4' H1
747     RG-O4' OS
748     RG-C1' CT
749     RG-H1' H2
750     RG-C3' CT
751     RG-H3' H1
752     RG-C2' CT
753     RG-H2'1 H1
754     RG-O2' OH
755     RG-HO'2 HO
756     RG-O3' OS
757     RG-N9 N*
758     RG-C4 CB
759     RG-C5 CB
760     RG-N7 NB
761     RG-C8 CK
762     RG-N3 NC
763     RG-C2 CA
764     RG-N1 NA
765     RG-C6 C
766     RG-H1 H
767     RG-N2 N2
768     RG-H21 H
769     RG-H22 H
770     RG-O6 O
771     RG-H8 H5
772     RC-O5' OS
773     RC-C5' CT
774     RC-H5'1 H1
775     RC-H5'2 H1
776     RC-C4' CT
777     RC-H4' H1
778     RC-O4' OS
779     RC-C1' CT
780     RC-H1' H2
781     RC-C3' CT
782     RC-H3' H1
783     RC-C2' CT
784     RC-H2'1 H1
785     RC-O2' OH
786     RC-HO'2 HO
787     RC-O3' OS
788     RC-N1 N*
789     RC-C2 C
790     RC-N3 NC
791     RC-C4 CA
792     RC-C5 CM
793     RC-C6 CM
794     RC-O2 O
795     RC-N4 N2
796     RC-H41 H
797     RC-H42 H
798     RC-H5 HA
799     RC-H6 H4
800     RU-O5' OS
801     RU-C5' CT
802     RU-H5'1 H1
803     RU-H5'2 H1
804     RU-C4' CT
805     RU-H4' H1
806     RU-O4' OS
807     RU-C1' CT
808     RU-H1' H2
809     RU-C3' CT
810     RU-H3' H1
811     RU-C2' CT
812     RU-H2'1 H1
813     RU-O2' OH
814     RU-HO'2 HO
815     RU-O3' OS
816     RU-N1 N*
817     RU-C2 C
818     RU-N3 NA
819     RU-C4 C
820     RU-C5 CM
821     RU-C6 CM
822     RU-O2 O
823     RU-H3 H
824     RU-O4 O
825     RU-H5 HA
826     RU-H6 H4
827     DA-O5' OS
828     DA-C5' CT
829     DA-H5'1 H1
830     DA-H5'2 H1
831     DA-C4' CT
832     DA-H4' H1
833     DA-O4' OS
834     DA-C1' CT
835     DA-H1' H2
836     DA-C3' CT
837     DA-H3' H1
838     DA-C2' CT
839     DA-H2'1 HC
840     DA-H2'2 HC
841     DA-O3' OS
842     DA-N9 N*
843     DA-C4 CB
844     DA-C5 CB
845     DA-N7 NB
846     DA-C8 CK
847     DA-N3 NC
848     DA-C2 CQ
849     DA-N1 NC
850     DA-C6 CA
851     DA-H2 H5
852     DA-N6 N2
853     DA-H61 H
854     DA-H62 H
855     DA-H8 H5
856     DG-O5' OS
857     DG-C5' CT
858     DG-H5'1 H1
859     DG-H5'2 H1
860     DG-C4' CT
861     DG-H4' H1
862     DG-O4' OS
863     DG-C1' CT
864     DG-H1' H2
865     DG-C3' CT
866     DG-H3' H1
867     DG-C2' CT
868     DG-H2'1 HC
869     DG-H2'2 HC
870     DG-O3' OS
871     DG-N9 N*
872     DG-C4 CB
873     DG-C5 CB
874     DG-N7 NB
875     DG-C8 CK
876     DG-N3 NC
877     DG-C2 CA
878     DG-N1 NA
879     DG-C6 C
880     DG-H1 H
881     DG-N2 N2
882     DG-H21 H
883     DG-H22 H
884     DG-O6 O
885     DG-H8 H5
886     DC-O5' OS
887     DC-C5' CT
888     DC-H5'1 H1
889     DC-H5'2 H1
890     DC-C4' CT
891     DC-H4' H1
892     DC-O4' OS
893     DC-C1' CT
894     DC-H1' H2
895     DC-C3' CT
896     DC-H3' H1
897     DC-C2' CT
898     DC-H2'1 HC
899     DC-H2'2 HC
900     DC-O3' OS
901     DC-N1 N*
902     DC-C2 C
903     DC-N3 NC
904     DC-C4 CA
905     DC-C5 CM
906     DC-C6 CM
907     DC-O2 O
908     DC-N4 N2
909     DC-H41 H
910     DC-H42 H
911     DC-H5 HA
912     DC-H6 H4
913     DT-O5' OS
914     DT-C5' CT
915     DT-H5'1 H1
916     DT-H5'2 H1
917     DT-C4' CT
918     DT-H4' H1
919     DT-O4' OS
920     DT-C1' CT
921     DT-H1' H2
922     DT-C3' CT
923     DT-H3' H1
924     DT-C2' CT
925     DT-H2'1 HC
926     DT-H2'2 HC
927     DT-O3' OS
928     DT-N1 N*
929     DT-C2 C
930     DT-N3 NA
931     DT-C4 C
932     DT-C5 CM
933     DT-C6 CM
934     DT-O2 O
935     DT-H3 H
936     DT-O4 O
937     DT-C7 CT
938     DT-H7 HC
939     DT-H6 H4
940     R-Phosphodiester P
941     R-Phosphodiester O2
942     R5H-O5' OH
943     R5H-H5T HO
944     R5P-O5' OS
945     R5P-P P
946     R5P-OP O2
947     R3H-O3' OH
948     R3H-H3T HO
949     R3P-O3' OS
950     R3P-P P
951     R3P-OP O2
952     D-Phosphodiester P
953     D-Phosphodiester O2
954     D5H-O5' OH
955     D5H-H5T HO
956     D5P-O5' OS
957     D5P-P P
958     D5P-OP O2
959     D3H-O3' OH
960     D3H-H3T HO
961     D3P-O3' OS
962     D3P-P P
963     D3P-OP O2
964     TIP3P OW
965     TIP3P HW
966     Li+ Li+
967     Na+ Na+
968     K+ K+
969     Rb+ Rb+
970     Cs+ Cs+
971     Mg+2 Mg+
972     Ca+2 Ca+
973     Zn+2 Zn+
974     Cl- Cl-
975     end AtomTypes
976    
977    
978     begin ChargeAtomTypes
979     //name charge
980     GLY-N -0.4157
981     GLY-CA -0.0252
982     GLY-C 0.5973
983     GLY-HN 0.2719
984     GLY-O -0.5679
985     GLY-HA 0.0698
986     ALA-N -0.4157
987     ALA-CA 0.0337
988     ALA-C 0.5973
989     ALA-HN 0.2719
990     ALA-O -0.5679
991     ALA-HA 0.0823
992     ALA-CB -0.1825
993     ALA-HB 0.0603
994     VAL-N -0.4157
995     VAL-CA -0.0875
996     VAL-C 0.5973
997     VAL-HN 0.2719
998     VAL-O -0.5679
999     VAL-HA 0.0969
1000     VAL-CB 0.2985
1001     VAL-HB -0.0297
1002     VAL-CG1 -0.3192
1003     VAL-HG1 0.0791
1004     VAL-CG2 -0.3192
1005     VAL-HG2 0.0791
1006     LEU-N -0.4157
1007     LEU-CA -0.0518
1008     LEU-C 0.5973
1009     LEU-HN 0.2719
1010     LEU-O -0.5679
1011     LEU-HA 0.0922
1012     LEU-CB -0.1102
1013     LEU-HB 0.0457
1014     LEU-CG 0.3531
1015     LEU-HG -0.0361
1016     LEU-CD1 -0.4121
1017     LEU-HD1 0.1000
1018     LEU-CD2 -0.4121
1019     LEU-HD2 0.1000
1020     ILE-N -0.4157
1021     ILE-CA -0.0597
1022     ILE-C 0.5973
1023     ILE-HN 0.2719
1024     ILE-O -0.5679
1025     ILE-HA 0.0869
1026     ILE-CB 0.1303
1027     ILE-HB 0.0187
1028     ILE-CG1 -0.0430
1029     ILE-HG1 0.0236
1030     ILE-CG2 -0.3204
1031     ILE-HG2 0.0882
1032     ILE-CD -0.0660
1033     ILE-HD 0.0186
1034     SER-N -0.4157
1035     SER-CA -0.0249
1036     SER-C 0.5973
1037     SER-HN 0.2719
1038     SER-O -0.5679
1039     SER-HA 0.0843
1040     SER-CB 0.2117
1041     SER-HB 0.0352
1042     SER-OG -0.6546
1043     SER-HG 0.4275
1044     THR-N -0.4157
1045     THR-CA -0.0389
1046     THR-C 0.5973
1047     THR-HN 0.2719
1048     THR-O -0.5679
1049     THR-HA 0.1007
1050     THR-CB 0.3654
1051     THR-HB 0.0043
1052     THR-OG1 -0.6761
1053     THR-HG1 0.4102
1054     THR-CG2 -0.2438
1055     THR-HG2 0.0642
1056     CYS-N -0.4157
1057     CYS-CA 0.0213
1058     CYS-C 0.5973
1059     CYS-HN 0.2719
1060     CYS-O -0.5679
1061     CYS-HA 0.1124
1062     CYS-CB -0.1231
1063     CYS-HB 0.1112
1064     CYS-SG -0.3119
1065     CYS-HG 0.1933
1066     CYX-N -0.4157
1067     CYX-CA 0.0429
1068     CYX-C 0.5973
1069     CYX-HN 0.2719
1070     CYX-O -0.5679
1071     CYX-HA 0.0766
1072     CYX-CB -0.0790
1073     CYX-HB 0.0910
1074     CYX-SG -0.1081
1075     PRO-N -0.2548
1076     PRO-CA -0.0266
1077     PRO-C 0.5896
1078     PRO-O -0.5748
1079     PRO-HA 0.0641
1080     PRO-CB -0.0070
1081     PRO-HB 0.0253
1082     PRO-CG 0.0189
1083     PRO-HG 0.0213
1084     PRO-CD 0.0192
1085     PRO-HD 0.0391
1086     PHE-N -0.4157
1087     PHE-CA -0.0024
1088     PHE-C 0.5973
1089     PHE-HN 0.2719
1090     PHE-O -0.5679
1091     PHE-HA 0.0978
1092     PHE-CB -0.0343
1093     PHE-HB 0.0295
1094     PHE-CG 0.0118
1095     PHE-CD -0.1256
1096     PHE-HD 0.1330
1097     PHE-CE -0.1704
1098     PHE-HE 0.1430
1099     PHE-CZ -0.1072
1100     PHE-HZ 0.1297
1101     TYR-N -0.4157
1102     TYR-CA -0.0014
1103     TYR-C 0.5973
1104     TYR-HN 0.2719
1105     TYR-O -0.5679
1106     TYR-HA 0.0876
1107     TYR-CB -0.0152
1108     TYR-HB 0.0295
1109     TYR-CG -0.0011
1110     TYR-CD -0.1906
1111     TYR-HD 0.1699
1112     TYR-CE -0.2341
1113     TYR-HE 0.1656
1114     TYR-CZ 0.3226
1115     TYR-OH -0.5579
1116     TYR-HH 0.3992
1117     TRP-N -0.4157
1118     TRP-CA -0.0275
1119     TRP-C 0.5973
1120     TRP-HN 0.2719
1121     TRP-O -0.5679
1122     TRP-HA 0.1123
1123     TRP-CB -0.0050
1124     TRP-HB 0.0339
1125     TRP-CG -0.1415
1126     TRP-CD1 -0.1638
1127     TRP-HD1 0.2062
1128     TRP-CD2 0.1243
1129     TRP-NE1 -0.3418
1130     TRP-HE1 0.3412
1131     TRP-CE2 0.1380
1132     TRP-CE3 -0.2387
1133     TRP-HE3 0.1700
1134     TRP-CZ2 -0.2601
1135     TRP-HZ2 0.1572
1136     TRP-CZ3 -0.1972
1137     TRP-HZ3 0.1447
1138     TRP-CH2 -0.1134
1139     TRP-HH2 0.1417
1140     HIS-N -0.3479
1141     HIS-CA -0.1354
1142     HIS-C 0.7341
1143     HIS-HN 0.2747
1144     HIS-O -0.5894
1145     HIS-HA 0.1212
1146     HIS-CB -0.0414
1147     HIS-HB 0.0810
1148     HIS-CG -0.0012
1149     HIS-ND1 -0.1513
1150     HIS-HD1 0.3866
1151     HIS-CD2 -0.1141
1152     HIS-HD2 0.2317
1153     HIS-CE1 -0.0170
1154     HIS-HE1 0.2681
1155     HIS-NE2 -0.1718
1156     HIS-HE2 0.3911
1157     HID-N -0.4157
1158     HID-CA 0.0188
1159     HID-C 0.5973
1160     HID-HN 0.2719
1161     HID-O -0.5679
1162     HID-HA 0.0881
1163     HID-CB -0.0462
1164     HID-HB 0.0402
1165     HID-CG -0.0266
1166     HID-ND1 -0.3811
1167     HID-HD1 0.3649
1168     HID-CD2 0.1292
1169     HID-HD2 0.1147
1170     HID-CE1 0.2057
1171     HID-HE1 0.1392
1172     HID-NE2 -0.5727
1173     HIE-N -0.4157
1174     HIE-CA -0.0581
1175     HIE-C 0.5973
1176     HIE-HN 0.2719
1177     HIE-O -0.5679
1178     HIE-HA 0.1360
1179     HIE-CB -0.0074
1180     HIE-HB 0.0367
1181     HIE-CG 0.1868
1182     HIE-ND1 -0.5432
1183     HIE-CD2 -0.2207
1184     HIE-HD2 0.1862
1185     HIE-CE1 0.1635
1186     HIE-HE1 0.1435
1187     HIE-NE2 -0.2795
1188     HIE-HE2 0.3339
1189     ASP-N -0.5163
1190     ASP-CA 0.0381
1191     ASP-C 0.5366
1192     ASP-HN 0.2936
1193     ASP-O -0.5819
1194     ASP-HA 0.0880
1195     ASP-CB -0.0303
1196     ASP-HB -0.0122
1197     ASP-CG 0.7994
1198     ASP-OD -0.8014
1199     ASN-N -0.4157
1200     ASN-CA 0.0143
1201     ASN-C 0.5973
1202     ASN-HN 0.2719
1203     ASN-O -0.5679
1204     ASN-HA 0.1048
1205     ASN-CB -0.2041
1206     ASN-HB 0.0797
1207     ASN-CG 0.7130
1208     ASN-OD1 -0.5931
1209     ASN-ND2 -0.9191
1210     ASN-HD2 0.4196
1211     GLU-N -0.5163
1212     GLU-CA 0.0397
1213     GLU-C 0.5366
1214     GLU-HN 0.2936
1215     GLU-O -0.5819
1216     GLU-HA 0.1105
1217     GLU-CB 0.0560
1218     GLU-HB -0.0173
1219     GLU-CG 0.0136
1220     GLU-HG -0.0425
1221     GLU-CD 0.8054
1222     GLU-OE -0.8188
1223     GLN-N -0.4157
1224     GLN-CA -0.0031
1225     GLN-C 0.5973
1226     GLN-HN 0.2719
1227     GLN-O -0.5679
1228     GLN-HA 0.0850
1229     GLN-CB -0.0036
1230     GLN-HB 0.0171
1231     GLN-CG -0.0645
1232     GLN-HG 0.0352
1233     GLN-CD 0.6951
1234     GLN-OE1 -0.6086
1235     GLN-NE2 -0.9407
1236     GLN-HE2 0.4251
1237     MET-N -0.4157
1238     MET-CA -0.0237
1239     MET-C 0.5973
1240     MET-HN 0.2719
1241     MET-O -0.5679
1242     MET-HA 0.0880
1243     MET-CB 0.0342
1244     MET-HB 0.0241
1245     MET-CG 0.0018
1246     MET-HG 0.0440
1247     MET-SD -0.2737
1248     MET-CE -0.0536
1249     MET-HE 0.0684
1250     LYS-N -0.3479
1251     LYS-CA -0.2400
1252     LYS-C 0.7341
1253     LYS-HN 0.2747
1254     LYS-O -0.5894
1255     LYS-HA 0.1426
1256     LYS-CB -0.0094
1257     LYS-HB 0.0362
1258     LYS-CG 0.0187
1259     LYS-HG 0.0103
1260     LYS-CD -0.0479
1261     LYS-HD 0.0621
1262     LYS-CE -0.0143
1263     LYS-HE 0.1135
1264     LYS-NZ -0.3854
1265     LYS-HZ 0.3400
1266     ARG-N -0.3479
1267     ARG-CA -0.2637
1268     ARG-C 0.7341
1269     ARG-HN 0.2747
1270     ARG-O -0.5894
1271     ARG-HA 0.1560
1272     ARG-CB -0.0007
1273     ARG-HB 0.0327
1274     ARG-CG 0.0390
1275     ARG-HG 0.0285
1276     ARG-CD 0.0486
1277     ARG-HD 0.0687
1278     ARG-NE -0.5295
1279     ARG-HE 0.3456
1280     ARG-CZ 0.8076
1281     ARG-NH -0.8627
1282     ARG-HH 0.4478
1283     ORN-N -0.3479
1284     ORN-CA -0.2400
1285     ORN-C 0.7341
1286     ORN-HN 0.2747
1287     ORN-O -0.5894
1288     ORN-HA 0.1426
1289     ORN-CB 0.0099
1290     ORN-HB 0.0362
1291     ORN-CG -0.0279
1292     ORN-HG 0.0621
1293     ORN-CD -0.0143
1294     ORN-HD 0.1135
1295     ORN-NE -0.3854
1296     ORN-HE 0.3400
1297     MAA-N -0.4157
1298     MAA-CA 0.1032
1299     MAA-C 0.5973
1300     MAA-HN 0.2719
1301     MAA-O -0.5679
1302     MAA-CB -0.2503
1303     MAA-HB 0.0853
1304     PCA-N -0.4157
1305     PCA-CA -0.0371
1306     PCA-C 0.5973
1307     PCA-HN 0.2719
1308     PCA-O -0.5679
1309     PCA-HA 0.0850
1310     PCA-CB -0.0036
1311     PCA-HB 0.0171
1312     PCA-CG -0.0645
1313     PCA-HG 0.0352
1314     PCA-CD 0.6000
1315     PCA-OE -0.5700
1316     FOR-C 0.5500
1317     FOR-H 0.0000
1318     FOR-O -0.5500
1319     ACE-CA -0.3662
1320     ACE-HA 0.1123
1321     ACE-C 0.5972
1322     ACE-O -0.5679
1323     C-Term -0.8400
1324     C-Term 0.4200
1325     N-MeAmide -0.4157
1326     N-MeAmide 0.2719
1327     N-MeAmide -0.1490
1328     N-MeAmide 0.0976
1329     NGLY-N 0.2943
1330     NGLY-CA -0.0100
1331     NGLY-C 0.6163
1332     NGLY-HN 0.1642
1333     NGLY-O -0.5722
1334     NGLY-HA 0.0895
1335     NALA-N 0.1414
1336     NALA-CA 0.1281
1337     NALA-C 0.6163
1338     NALA-HN 0.1997
1339     NALA-O -0.5722
1340     NALA-HA 0.0889
1341     NVAL-N 0.0577
1342     NVAL-CA 0.0023
1343     NVAL-C 0.6163
1344     NVAL-HN 0.2272
1345     NVAL-O -0.5722
1346     NVAL-HA 0.1093
1347     NLEU-N 0.1010
1348     NLEU-CA 0.0343
1349     NLEU-C 0.6123
1350     NLEU-HN 0.2148
1351     NLEU-O -0.5713
1352     NLEU-HA 0.1053
1353     NILE-N 0.0311
1354     NILE-CA 0.0389
1355     NILE-C 0.6123
1356     NILE-HN 0.2329
1357     NILE-O -0.5713
1358     NILE-HA 0.1031
1359     NSER-N 0.1849
1360     NSER-CA 0.0684
1361     NSER-C 0.6163
1362     NSER-HN 0.1898
1363     NSER-O -0.5722
1364     NSER-HA 0.0782
1365     NTHR-N 0.1812
1366     NTHR-CA 0.0332
1367     NTHR-C 0.6163
1368     NTHR-HN 0.1934
1369     NTHR-O -0.5722
1370     NTHR-HA 0.1087
1371     NCYS-N 0.1325
1372     NCYS-CA 0.0978
1373     NCYS-C 0.6123
1374     NCYS-HN 0.2023
1375     NCYS-O -0.5713
1376     NCYS-HA 0.1411
1377     NCYX-N 0.2096
1378     NCYX-CA 0.1138
1379     NCYX-C 0.6163
1380     NCYX-HN 0.1815
1381     NCYX-O -0.5713
1382     NCYX-HA 0.0922
1383     NPRO-N -0.2020
1384     NPRO-CA 0.1589
1385     NPRO-C 0.5260
1386     NPRO-HN 0.3120
1387     NPRO-O -0.5000
1388     NPRO-HA 0.1000
1389     NPRO-CD -0.0120
1390     NPRO-HD 0.1000
1391     NPHE-N 0.1737
1392     NPHE-CA 0.0859
1393     NPHE-C 0.6123
1394     NPHE-HN 0.1921
1395     NPHE-O -0.5713
1396     NPHE-HA 0.1041
1397     NTYR-N 0.1940
1398     NTYR-CA 0.0766
1399     NTYR-C 0.6123
1400     NTYR-HN 0.1873
1401     NTYR-O -0.5713
1402     NTYR-HA 0.0983
1403     NTRP-N 0.1913
1404     NTRP-CA 0.0555
1405     NTRP-C 0.6123
1406     NTRP-HN 0.1888
1407     NTRP-O -0.5713
1408     NTRP-HA 0.1162
1409     NHIS-N 0.2560
1410     NHIS-CA 0.0653
1411     NHIS-C 0.7214
1412     NHIS-HN 0.1704
1413     NHIS-O -0.6013
1414     NHIS-HA 0.1047
1415     NHID-N 0.1542
1416     NHID-CA 0.1126
1417     NHID-C 0.6123
1418     NHID-HN 0.1963
1419     NHID-O -0.5713
1420     NHID-HA 0.0958
1421     NHIE-N 0.1472
1422     NHIE-CA 0.0325
1423     NHIE-C 0.6123
1424     NHIE-HN 0.2016
1425     NHIE-O -0.5713
1426     NHIE-HA 0.1380
1427     NASP-N 0.0782
1428     NASP-CA 0.0326
1429     NASP-C 0.5621
1430     NASP-HN 0.2200
1431     NASP-O -0.5889
1432     NASP-HA 0.1141
1433     NASN-N 0.1801
1434     NASN-CA 0.0811
1435     NASN-C 0.6163
1436     NASN-HN 0.1921
1437     NASN-O -0.5722
1438     NASN-HA 0.1231
1439     NGLU-N 0.0017
1440     NGLU-CA 0.0698
1441     NGLU-C 0.5621
1442     NGLU-HN 0.2391
1443     NGLU-O -0.5889
1444     NGLU-HA 0.1202
1445     NCLN-N 0.1493
1446     NCLN-CA 0.0769
1447     NCLN-C 0.6123
1448     NCLN-HN 0.1996
1449     NCLN-O -0.5713
1450     NCLN-HA 0.1015
1451     NMET-N 0.1592
1452     NMET-CA 0.0429
1453     NMET-C 0.6123
1454     NMET-HN 0.1984
1455     NMET-O -0.5713
1456     NMET-HA 0.1116
1457     NLYS-N 0.0966
1458     NLYS-CA -0.0101
1459     NLYS-C 0.7214
1460     NLYS-HN 0.2165
1461     NLYS-O -0.6013
1462     NLYS-HA 0.1180
1463     NARG-N 0.1305
1464     NARG-CA -0.0359
1465     NARG-C 0.7214
1466     NARG-HN 0.2083
1467     NARG-O -0.6013
1468     NARG-HA 0.1242
1469     NORN-N 0.0966
1470     NORN-CA -0.0101
1471     NORN-C 0.7214
1472     NORN-HN 0.2165
1473     NORN-O -0.6013
1474     NORN-HA 0.1180
1475     NAIB-N 0.1000
1476     NAIB-CA 0.2447
1477     NAIB-C 0.6163
1478     NAIB-HN 0.2000
1479     NAIB-O -0.5722
1480     CGLY-N -0.3821
1481     CGLY-CA -0.2493
1482     CGLY-C 0.7231
1483     CGLY-HN 0.2681
1484     CGLY-OXT -0.7855
1485     CGLY-HA 0.1056
1486     CALA-N -0.3821
1487     CALA-CA -0.1532
1488     CALA-C 0.7731
1489     CALA-HN 0.2681
1490     CALA-OXT -0.8055
1491     CALA-HA 0.1067
1492     CVAL-N -0.3821
1493     CVAL-CA -0.3352
1494     CVAL-C 0.8350
1495     CVAL-HN 0.2681
1496     CVAL-OXT -0.8173
1497     CVAL-HA 0.1438
1498     CLEU-N -0.3821
1499     CLEU-CA -0.2874
1500     CLEU-C 0.8326
1501     CLEU-HN 0.2681
1502     CLEU-OXT -0.8199
1503     CLEU-HA 0.1346
1504     CILE-N -0.3821
1505     CILE-CA -0.3070
1506     CILE-C 0.8343
1507     CILE-HN 0.2681
1508     CILE-OXT -0.8190
1509     CILE-HA 0.1375
1510     CSER-N -0.3821
1511     CSER-CA -0.2563
1512     CSER-C 0.8113
1513     CSER-HN 0.2681
1514     CSER-OXT -0.8132
1515     CSER-HA 0.1304
1516     CTHR-N -0.3821
1517     CTHR-CA -0.2315
1518     CTHR-C 0.7810
1519     CTHR-HN 0.2681
1520     CTHR-OXT -0.8044
1521     CTHR-HA 0.1207
1522     CCYS-N -0.3821
1523     CCYS-CA -0.1598
1524     CCYS-C 0.7497
1525     CCYS-HN 0.2681
1526     CCYS-OXT -0.7981
1527     CCYS-HA 0.1396
1528     CCYX-N -0.3821
1529     CCYX-CA -0.1283
1530     CCYX-C 0.7618
1531     CCYX-HN 0.2681
1532     CCYX-OXT -0.8041
1533     CCYX-HA 0.0938
1534     CPRO-N -0.2802
1535     CPRO-CA -0.1236
1536     CPRO-C 0.6631
1537     CPRO-OXT -0.7697
1538     CPRO-HA 0.0776
1539     CPHE-N -0.3821
1540     CPHE-CA -0.1756
1541     CPHE-C 0.7660
1542     CPHE-HN 0.2681
1543     CPHE-OXT -0.8026
1544     CPHE-HA 0.1098
1545     CTYR-N -0.3821
1546     CTYR-CA -0.1911
1547     CTYR-C 0.7817
1548     CTYR-HN 0.2681
1549     CTYR-OXT -0.8070
1550     CTYR-HA 0.1092
1551     CTRP-N -0.3821
1552     CTRP-CA -0.2064
1553     CTRP-C 0.7658
1554     CTRP-HN 0.2681
1555     CTRP-OXT -0.8011
1556     CTRP-HA 0.1272
1557     CHIS-N -0.3481
1558     CHIS-CA -0.1503
1559     CHIS-C 0.8032
1560     CHIS-HN 0.2764
1561     CHIS-OXT -0.8177
1562     CHIS-HA 0.1115
1563     CHID-N -0.3821
1564     CHID-CA -0.1618
1565     CHID-C 0.7615
1566     CHID-HN 0.2681
1567     CHID-OXT -0.8016
1568     CHID-HA 0.1100
1569     CHIE-N -0.3821
1570     CHIE-CA -0.2661
1571     CHIE-C 0.7916
1572     CHIE-HN 0.2681
1573     CHIE-OXT -0.8065
1574     CHIE-HA 0.1650
1575     CASP-N -0.5192
1576     CASP-CA -0.1810
1577     CASP-C 0.7256
1578     CASP-HN 0.3055
1579     CASP-OXT -0.7887
1580     CASP-HA 0.1046
1581     CASN-N -0.3821
1582     CASN-CA -0.1927
1583     CASN-C 0.8050
1584     CASN-HN 0.2681
1585     CASN-OXT -0.8147
1586     CASN-HA 0.1358
1587     CGLU-N -0.5192
1588     CGLU-CA -0.2000
1589     CGLU-C 0.7420
1590     CGLU-HN 0.3055
1591     CGLU-OXT -0.7930
1592     CGLU-HA 0.1399
1593     CGLN-N -0.3821
1594     CGLN-CA -0.2108
1595     CGLN-C 0.7775
1596     CGLN-HN 0.2681
1597     CGLN-OXT -0.8042
1598     CGLN-HA 0.1232
1599     CMET-N -0.3821
1600     CMET-CA -0.2441
1601     CMET-C 0.8013
1602     CMET-HN 0.2681
1603     CMET-OXT -0.8105
1604     CMET-HA 0.1277
1605     CLYS-N -0.3481
1606     CLYS-CA -0.2964
1607     CLYS-C 0.8488
1608     CLYS-HN 0.2764
1609     CLYS-OXT -0.8252
1610     CLYS-HA 0.1438
1611     CARG-N -0.3481
1612     CARG-CA -0.3117
1613     CARG-C 0.8557
1614     CARG-HN 0.2764
1615     CARG-OXT -0.8266
1616     CARG-HA 0.1447
1617     CORN-N -0.3481
1618     CORN-CA -0.2964
1619     CORN-C 0.8488
1620     CORN-HN 0.2764
1621     CORN-OXT -0.8252
1622     CORN-HA 0.1438
1623     CAIB-N -0.3821
1624     CAIB-CA -0.0572
1625     CAIB-C 0.8000
1626     CAIB-HN 0.2681
1627     CAIB-OXT -0.8200
1628     RA-O5' -0.4989
1629     RA-C5' 0.0558
1630     RA-H5'1 0.0679
1631     RA-H5'2 0.0679
1632     RA-C4' 0.1065
1633     RA-H4' 0.1174
1634     RA-O4' -0.3548
1635     RA-C1' 0.0394
1636     RA-H1' 0.2007
1637     RA-C3' 0.2022
1638     RA-H3' 0.0615
1639     RA-C2' 0.0670
1640     RA-H2'1 0.0972
1641     RA-O2' -0.6139
1642     RA-HO'2 0.4186
1643     RA-O3' -0.5246
1644     RA-N9 -0.0251
1645     RA-C4 0.3053
1646     RA-C5 0.0515
1647     RA-N7 -0.6073
1648     RA-C8 0.2006
1649     RA-N3 -0.6997
1650     RA-C2 0.5875
1651     RA-N1 -0.7615
1652     RA-C6 0.7009
1653     RA-H2 0.0473
1654     RA-N6 -0.9019
1655     RA-H61 0.4115
1656     RA-H62 0.4115
1657     RA-H8 0.1553
1658     RG-O5' -0.4989
1659     RG-C5' 0.0558
1660     RG-H5'1 0.0679
1661     RG-H5'2 0.0679
1662     RG-C4' 0.1065
1663     RG-H4' 0.1174
1664     RG-O4' -0.3548
1665     RG-C1' 0.0191
1666     RG-H1' 0.2006
1667     RG-C3' 0.2022
1668     RG-H3' 0.0615
1669     RG-C2' 0.0670
1670     RG-H2'1 0.0972
1671     RG-O2' -0.6139
1672     RG-HO'2 0.4186
1673     RG-O3' -0.5246
1674     RG-N9 0.0492
1675     RG-C4 0.1222
1676     RG-C5 0.1744
1677     RG-N7 -0.5709
1678     RG-C8 0.1374
1679     RG-N3 -0.6323
1680     RG-C2 0.7657
1681     RG-N1 -0.4787
1682     RG-C6 0.4770
1683     RG-H1 0.3424
1684     RG-N2 -0.9672
1685     RG-H21 0.4364
1686     RG-H22 0.4364
1687     RG-O6 -0.5597
1688     RG-H8 0.1640
1689     RC-O5' -0.4989
1690     RC-C5' 0.0558
1691     RC-H5'1 0.0679
1692     RC-H5'2 0.0679
1693     RC-C4' 0.1065
1694     RC-H4' 0.1174
1695     RC-O4' -0.3548
1696     RC-C1' 0.0066
1697     RC-H1' 0.2029
1698     RC-C3' 0.2022
1699     RC-H3' 0.0615
1700     RC-C2' 0.0670
1701     RC-H2'1 0.0972
1702     RC-O2' -0.6139
1703     RC-HO'2 0.4186
1704     RC-O3' -0.5246
1705     RC-N1 -0.0484
1706     RC-C2 0.7538
1707     RC-N3 -0.7584
1708     RC-C4 0.8185
1709     RC-C5 -0.5215
1710     RC-C6 0.0053
1711     RC-O2 -0.6252
1712     RC-N4 -0.9530
1713     RC-H41 0.4234
1714     RC-H42 0.4234
1715     RC-H5 0.1928
1716     RC-H6 0.1958
1717     RU-O5' -0.4989
1718     RU-C5' 0.0558
1719     RU-H5'1 0.0679
1720     RU-H5'2 0.0679
1721     RU-C4' 0.1065
1722     RU-H4' 0.1174
1723     RU-O4' -0.3548
1724     RU-C1' 0.0674
1725     RU-H1' 0.1824
1726     RU-C3' 0.2022
1727     RU-H3' 0.0615
1728     RU-C2' 0.0670
1729     RU-H2'1 0.0972
1730     RU-O2' -0.6139
1731     RU-HO'2 0.4186
1732     RU-O3' -0.5246
1733     RU-N1 0.0418
1734     RU-C2 0.4687
1735     RU-N3 -0.3549
1736     RU-C4 0.5952
1737     RU-C5 -0.3635
1738     RU-C6 -0.1126
1739     RU-O2 -0.5477
1740     RU-H3 0.3154
1741     RU-O4 -0.5761
1742     RU-H5 0.1811
1743     RU-H6 0.2188
1744     DA-O5' -0.4954
1745     DA-C5' -0.0069
1746     DA-H5'1 0.0754
1747     DA-H5'2 0.0754
1748     DA-C4' 0.1629
1749     DA-H4' 0.1176
1750     DA-O4' -0.3691
1751     DA-C1' 0.0431
1752     DA-H1' 0.1838
1753     DA-C3' 0.0713
1754     DA-H3' 0.0985
1755     DA-C2' -0.0854
1756     DA-H2'1 0.0718
1757     DA-H2'2 0.0718
1758     DA-O3' -0.5232
1759     DA-N9 -0.0268
1760     DA-C4 0.3800
1761     DA-C5 0.0725
1762     DA-N7 -0.6175
1763     DA-C8 0.1607
1764     DA-N3 -0.7417
1765     DA-C2 0.5716
1766     DA-N1 -0.7624
1767     DA-C6 0.6897
1768     DA-H2 0.0598
1769     DA-N6 -0.9123
1770     DA-H61 0.4167
1771     DA-H62 0.4167
1772     DA-H8 0.1877
1773     DG-O5' -0.4954
1774     DG-C5' -0.0069
1775     DG-H5'1 0.0754
1776     DG-H5'2 0.0754
1777     DG-C4' 0.1629
1778     DG-H4' 0.1176
1779     DG-O4' -0.3691
1780     DG-C1' 0.0358
1781     DG-H1' 0.1746
1782     DG-C3' 0.0713
1783     DG-H3' 0.0985
1784     DG-C2' -0.0854
1785     DG-H2'1 0.0718
1786     DG-H2'2 0.0718
1787     DG-O3' -0.5232
1788     DG-N9 0.0577
1789     DG-C4 0.1814
1790     DG-C5 0.1991
1791     DG-N7 -0.5725
1792     DG-C8 0.0736
1793     DG-N3 -0.6636
1794     DG-C2 0.7432
1795     DG-N1 -0.5053
1796     DG-C6 0.4918
1797     DG-H1 0.3520
1798     DG-N2 -0.9230
1799     DG-H21 0.4235
1800     DG-H22 0.4235
1801     DG-O6 -0.5699
1802     DG-H8 0.1997
1803     DC-O5' -0.4954
1804     DC-C5' -0.0069
1805     DC-H5'1 0.0754
1806     DC-H5'2 0.0754
1807     DC-C4' 0.1629
1808     DC-H4' 0.1176
1809     DC-O4' -0.3691
1810     DC-C1' -0.0116
1811     DC-H1' 0.1963
1812     DC-C3' 0.0713
1813     DC-H3' 0.0985
1814     DC-C2' -0.0854
1815     DC-H2'1 0.0718
1816     DC-H2'2 0.0718
1817     DC-O3' -0.5232
1818     DC-N1 -0.0339
1819     DC-C2 0.7959
1820     DC-N3 -0.7748
1821     DC-C4 0.8439
1822     DC-C5 -0.5222
1823     DC-C6 -0.0183
1824     DC-O2 -0.6548
1825     DC-N4 -0.9773
1826     DC-H41 0.4314
1827     DC-H42 0.4314
1828     DC-H5 0.1863
1829     DC-H6 0.2293
1830     DT-O5' -0.4954
1831     DT-C5' -0.0069
1832     DT-H5'1 0.0754
1833     DT-H5'2 0.0754
1834     DT-C4' 0.1629
1835     DT-H4' 0.1176
1836     DT-O4' -0.3691
1837     DT-C1' 0.0680
1838     DT-H1' 0.1804
1839     DT-C3' 0.0713
1840     DT-H3' 0.0985
1841     DT-C2' -0.0854
1842     DT-H2'1 0.0718
1843     DT-H2'2 0.0718
1844     DT-O3' -0.5232
1845     DT-N1 -0.0239
1846     DT-C2 0.5677
1847     DT-N3 -0.4340
1848     DT-C4 0.5194
1849     DT-C5 0.0025
1850     DT-C6 -0.2209
1851     DT-O2 -0.5881
1852     DT-H3 0.3420
1853     DT-O4 -0.5563
1854     DT-C7 -0.2269
1855     DT-H7 0.0770
1856     DT-H6 0.2607
1857     R-Phosphodiester 1.1662
1858     R-Phosphodiester -0.7760
1859     R5H-O5' -0.6223
1860     R5H-H5T 0.4295
1861     R5P-O5' -0.6328
1862     R5P-P 0.9000
1863     R5P-OP -0.8200
1864     R3H-O3' -0.6541
1865     R3H-H3T 0.4376
1866     R3P-O3' -0.6565
1867     R3P-P 0.9000
1868     R3P-OP -0.8200
1869     D-Phosphodiester 1.1659
1870     D-Phosphodiester -0.7761
1871     D5H-O5' -0.6318
1872     D5H-H5T 0.4422
1873     D5P-O5' -0.6296
1874     D5P-P 0.9000
1875     D5P-OP -0.8200
1876     D3H-O3' -0.6549
1877     D3H-H3T 0.4396
1878     D3P-O3' -0.6553
1879     D3P-P 0.9000
1880     D3P-OP -0.8200
1881     TIP3P -0.834
1882     TIP3P 0.417
1883     Li+ 1.000
1884     Na+ 1.000
1885     K+ 1.000
1886     Rb+ 1.000
1887     Cs+ 1.000
1888     Mg+2 2.000
1889     Ca+2 2.000
1890     Zn+2 2.000
1891     Cl- -1.000
1892     end ChargeAtomTypes
1893    
1894    
1895    
1896     begin LennardJonesAtomTypes
1897     //name epsilon sigma
1898     CT 0.109400 3.399670
1899     C 0.086000 3.399670
1900     CA 0.086000 3.399670
1901     CM 0.086000 3.399670
1902     CC 0.086000 3.399670
1903     CV 0.086000 3.399670
1904     CW 0.086000 3.399670
1905     CR 0.086000 3.399670
1906     CB 0.086000 3.399670
1907     C* 0.086000 3.399670
1908     CN 0.086000 3.399670
1909     CK 0.086000 3.399670
1910     CQ 0.086000 3.399670
1911     N 0.170000 3.249999
1912     NA 0.170000 3.249999
1913     NB 0.170000 3.249999
1914     NC 0.170000 3.249999
1915     N* 0.170000 3.249999
1916     N2 0.170000 3.249999
1917     N3 0.170000 3.340870
1918     OW 0.152000 3.150752
1919     OH 0.210400 3.066473
1920     OS 0.170000 3.000012
1921     O 0.210000 2.959922
1922     O2 0.210000 2.959922
1923     S 0.250000 3.563595
1924     SH 0.250000 3.563595
1925     P 0.200000 3.741775
1926     H 0.015700 1.069078
1927     HW 0.000000 0.000178
1928     HO 0.000000 0.000178
1929     HS 0.015700 1.069078
1930     HA 0.015000 2.599642
1931     HC 0.015700 2.649533
1932     H1 0.015700 2.471353
1933     H2 0.015700 2.293173
1934     H3 0.015700 2.114994
1935     HP 0.015700 1.959977
1936     H4 0.015000 2.510553
1937     H5 0.015000 2.421463
1938     Li+ 0.018300 2.025904
1939     Na+ 0.002770 3.328398
1940     K+ 0.000328 4.736018
1941     Rb+ 0.000170 5.266993
1942     Cs+ 0.000081 6.049202
1943     Mg+ 0.894700 1.412253
1944     Ca+ 0.459789 3.052397
1945     Zn+ 0.012500 1.959977
1946     Cl- 0.100000 4.401040
1947     end LennardJonesAtomTypes
1948    
1949    
1950     begin BondTypes
1951     //Atom1 Atom2 Harmonic b0 kb (kcal/mol)
1952     CT CT Harmonic 1.526000 310.000000
1953     CT C Harmonic 1.522000 317.000000
1954     CT CA Harmonic 1.510000 317.000000
1955     CT CM Harmonic 1.510000 317.000000
1956     CT CC Harmonic 1.504000 317.000000
1957     CT C* Harmonic 1.495000 317.000000
1958     CT N Harmonic 1.449000 337.000000
1959     CT N* Harmonic 1.475000 337.000000
1960     CT N2 Harmonic 1.463000 337.000000
1961     CT N3 Harmonic 1.471000 367.000000
1962     CT OH Harmonic 1.410000 320.000000
1963     CT OS Harmonic 1.410000 320.000000
1964     CT S Harmonic 1.810000 227.000000
1965     CT SH Harmonic 1.810000 237.000000
1966     CT HC Harmonic 1.090000 340.000000
1967     CT H1 Harmonic 1.090000 340.000000
1968     CT H2 Harmonic 1.090000 340.000000
1969     CT H3 Harmonic 1.090000 340.000000
1970     CT HP Harmonic 1.090000 340.000000
1971     C CA Harmonic 1.409000 469.000000
1972     C CM Harmonic 1.444000 410.000000
1973     C CB Harmonic 1.419000 447.000000
1974     C N Harmonic 1.335000 490.000000
1975     C NA Harmonic 1.388000 418.000000
1976     C NC Harmonic 1.358000 457.000000
1977     C N* Harmonic 1.383000 424.000000
1978     C O Harmonic 1.229000 570.000000
1979     C O2 Harmonic 1.250000 656.000000
1980     CA CA Harmonic 1.400000 469.000000
1981     CA CM Harmonic 1.433000 427.000000
1982     CA CB Harmonic 1.404000 469.000000
1983     CA CN Harmonic 1.400000 469.000000
1984     CA NA Harmonic 1.381000 427.000000
1985     CA NC Harmonic 1.339000 483.000000
1986     CA N2 Harmonic 1.340000 481.000000
1987     CA OH Harmonic 1.364000 450.000000
1988     CA HA Harmonic 1.080000 367.000000
1989     CA H4 Harmonic 1.080000 367.000000
1990     CM CM Harmonic 1.350000 549.000000
1991     CM N* Harmonic 1.365000 448.000000
1992     CM HA Harmonic 1.080000 367.000000
1993     CM H4 Harmonic 1.080000 367.000000
1994     CM H5 Harmonic 1.080000 367.000000
1995     CC CV Harmonic 1.375000 512.000000
1996     CC CW Harmonic 1.371000 518.000000
1997     CC NA Harmonic 1.385000 422.000000
1998     CC NB Harmonic 1.394000 410.000000
1999     CV NB Harmonic 1.394000 410.000000
2000     CV H4 Harmonic 1.080000 367.000000
2001     CW C* Harmonic 1.352000 546.000000
2002     CW NA Harmonic 1.381000 427.000000
2003     CW H4 Harmonic 1.080000 367.000000
2004     CR NA Harmonic 1.343000 477.000000
2005     CR NB Harmonic 1.335000 488.000000
2006     CR H5 Harmonic 1.080000 367.000000
2007     CB CB Harmonic 1.370000 520.000000
2008     CB C* Harmonic 1.459000 388.000000
2009     CB CN Harmonic 1.419000 447.000000
2010     CB NB Harmonic 1.391000 414.000000
2011     CB NC Harmonic 1.354000 461.000000
2012     CB N* Harmonic 1.374000 436.000000
2013     C* HC Harmonic 1.080000 367.000000
2014     CN NA Harmonic 1.380000 428.000000
2015     CK NB Harmonic 1.304000 529.000000
2016     CK N* Harmonic 1.371000 440.000000
2017     CK H5 Harmonic 1.080000 367.000000
2018     CQ NC Harmonic 1.324000 502.000000
2019     CQ H5 Harmonic 1.080000 367.000000
2020     N H Harmonic 1.010000 434.000000
2021     NA H Harmonic 1.010000 434.000000
2022     N* H Harmonic 1.010000 434.000000
2023     N2 H Harmonic 1.010000 434.000000
2024     N3 H Harmonic 1.010000 434.000000
2025     OW HW Harmonic 0.957200 553.000000
2026     OH P Harmonic 1.610000 230.000000
2027     OH HO Harmonic 0.960000 553.000000
2028     OS P Harmonic 1.610000 230.000000
2029     OS HO Harmonic 0.960000 553.000000
2030     O2 P Harmonic 1.480000 525.000000
2031     S S Harmonic 2.038000 166.000000
2032     SH HS Harmonic 1.336000 274.000000
2033     HW HW Harmonic 1.513600 553.000000
2034     end BondType
2035    
2036    
2037     begin BendTypes
2038     //Atom1 Atom2 Atom3 Harmonic Theta Ktheta
2039     CT CT CT Harmonic 109.500000 80.000000
2040     CT CT C Harmonic 111.100000 126.000000
2041     CT CT CA Harmonic 114.000000 126.000000
2042     CT CT CC Harmonic 113.100000 126.000000
2043     CT CT C* Harmonic 115.600000 126.000000
2044     CT CT N Harmonic 109.700000 160.000000
2045     CT CT N* Harmonic 109.500000 100.000000
2046     CT CT N2 Harmonic 111.200000 160.000000
2047     CT CT N3 Harmonic 111.200000 160.000000
2048     CT CT OH Harmonic 109.500000 100.000000
2049     CT CT OS Harmonic 109.500000 100.000000
2050     CT CT S Harmonic 114.700000 100.000000
2051     CT CT SH Harmonic 108.600000 100.000000
2052     CT CT HC Harmonic 109.500000 100.000000
2053     CT CT H1 Harmonic 109.500000 100.000000
2054     CT CT H2 Harmonic 109.500000 100.000000
2055     CT CT HP Harmonic 109.500000 100.000000
2056     C CT N Harmonic 110.100000 126.000000
2057     C CT N3 Harmonic 111.200000 160.000000
2058     C CT HC Harmonic 109.500000 100.000000
2059     C CT H1 Harmonic 109.500000 100.000000
2060     C CT HP Harmonic 109.500000 100.000000
2061     CA CT HC Harmonic 109.500000 100.000000
2062     CM CT HC Harmonic 109.500000 100.000000
2063     CC CT HC Harmonic 109.500000 100.000000
2064     C* CT HC Harmonic 109.500000 100.000000
2065     N CT H1 Harmonic 109.500000 100.000000
2066     N* CT OS Harmonic 109.500000 100.000000
2067     N* CT H1 Harmonic 109.500000 100.000000
2068     N* CT H2 Harmonic 109.500000 100.000000
2069     N2 CT H1 Harmonic 109.500000 100.000000
2070     N3 CT H1 Harmonic 109.500000 100.000000
2071     N3 CT HP Harmonic 109.500000 100.000000
2072     OH CT H1 Harmonic 109.500000 100.000000
2073     OS CT H1 Harmonic 109.500000 100.000000
2074     OS CT H2 Harmonic 109.500000 100.000000
2075     S CT H1 Harmonic 109.500000 100.000000
2076     SH CT H1 Harmonic 109.500000 100.000000
2077     HC CT HC Harmonic 109.500000 70.000000
2078     H1 CT H1 Harmonic 109.500000 70.000000
2079     H2 CT H2 Harmonic 109.500000 70.000000
2080     HP CT HP Harmonic 109.500000 70.000000
2081     CT C N Harmonic 116.600000 140.000000
2082     CT C O Harmonic 120.400000 160.000000
2083     CT C O2 Harmonic 117.000000 140.000000
2084     CA C CA Harmonic 120.000000 126.000000
2085     CM C NA Harmonic 114.100000 140.000000
2086     CM C O Harmonic 125.300000 160.000000
2087     CB C NA Harmonic 111.300000 140.000000
2088     CB C O Harmonic 128.800000 160.000000
2089     N C O Harmonic 122.900000 160.000000
2090     NA C N* Harmonic 115.400000 140.000000
2091     NA C O Harmonic 120.600000 160.000000
2092     NC C N* Harmonic 118.600000 140.000000
2093     NC C O Harmonic 122.500000 160.000000
2094     N* C O Harmonic 120.900000 160.000000
2095     O C O Harmonic 126.000000 160.000000
2096     O2 C O2 Harmonic 126.000000 160.000000
2097     CT CA CA Harmonic 120.000000 140.000000
2098     C CA CA Harmonic 120.000000 126.000000
2099     C CA HA Harmonic 120.000000 100.000000
2100     CA CA CA Harmonic 120.000000 126.000000
2101     CA CA CB Harmonic 120.000000 126.000000
2102     CA CA CN Harmonic 120.000000 126.000000
2103     CA CA OH Harmonic 120.000000 140.000000
2104     CA CA HA Harmonic 120.000000 100.000000
2105     CA CA H4 Harmonic 120.000000 100.000000
2106     CM CA NC Harmonic 121.500000 140.000000
2107     CM CA N2 Harmonic 120.100000 140.000000
2108     CB CA NC Harmonic 117.300000 140.000000
2109     CB CA N2 Harmonic 123.500000 140.000000
2110     CB CA HA Harmonic 120.000000 100.000000
2111     CB CA H4 Harmonic 120.000000 100.000000
2112     CN CA HA Harmonic 120.000000 100.000000
2113     NA CA NC Harmonic 123.300000 140.000000
2114     NA CA N2 Harmonic 116.000000 140.000000
2115     NC CA N2 Harmonic 119.300000 140.000000
2116     N2 CA N2 Harmonic 120.000000 140.000000
2117     CT CM C Harmonic 119.700000 140.000000
2118     CT CM CM Harmonic 119.700000 140.000000
2119     C CM CM Harmonic 120.700000 126.000000
2120     C CM HA Harmonic 119.700000 100.000000
2121     C CM H4 Harmonic 119.700000 100.000000
2122     CA CM CM Harmonic 117.000000 126.000000
2123     CA CM HA Harmonic 123.300000 100.000000
2124     CA CM H4 Harmonic 123.300000 100.000000
2125     CM CM N* Harmonic 121.200000 140.000000
2126     CM CM HA Harmonic 119.700000 100.000000
2127     CM CM H4 Harmonic 119.700000 100.000000
2128     N* CM H4 Harmonic 119.100000 100.000000
2129     CT CC CV Harmonic 120.000000 140.000000
2130     CT CC CW Harmonic 120.000000 140.000000
2131     CT CC NA Harmonic 120.000000 140.000000
2132     CT CC NB Harmonic 120.000000 140.000000
2133     CV CC NA Harmonic 120.000000 140.000000
2134     CW CC NA Harmonic 120.000000 140.000000
2135     CW CC NB Harmonic 120.000000 140.000000
2136     CC CV NB Harmonic 120.000000 140.000000
2137     CC CV H4 Harmonic 120.000000 100.000000
2138     NB CV H4 Harmonic 120.000000 100.000000
2139     CC CW NA Harmonic 120.000000 140.000000
2140     CC CW H4 Harmonic 120.000000 100.000000
2141     C* CW NA Harmonic 108.700000 140.000000
2142     C* CW H4 Harmonic 120.000000 100.000000
2143     NA CW H4 Harmonic 120.000000 100.000000
2144     NA CR NA Harmonic 120.000000 140.000000
2145     NA CR NB Harmonic 120.000000 140.000000
2146     NA CR H5 Harmonic 120.000000 100.000000
2147     NB CR H5 Harmonic 120.000000 100.000000
2148     C CB CB Harmonic 119.200000 126.000000
2149     C CB NB Harmonic 130.000000 140.000000
2150     CA CB CB Harmonic 117.300000 126.000000
2151     CA CB C* Harmonic 134.900000 126.000000
2152     CA CB CN Harmonic 116.200000 126.000000
2153     CA CB NB Harmonic 132.400000 140.000000
2154     CB CB NB Harmonic 110.400000 140.000000
2155     CB CB NC Harmonic 127.700000 140.000000
2156     CB CB N* Harmonic 106.200000 140.000000
2157     C* CB CN Harmonic 108.800000 126.000000
2158     NC CB N* Harmonic 126.200000 140.000000
2159     CT C* CW Harmonic 125.000000 140.000000
2160     CT C* CB Harmonic 128.600000 140.000000
2161     CW C* CB Harmonic 106.400000 126.000000
2162     CA CN CB Harmonic 122.700000 126.000000
2163     CA CN NA Harmonic 132.800000 140.000000
2164     CB CN NA Harmonic 104.400000 140.000000
2165     NB CK N* Harmonic 113.900000 140.000000
2166     NB CK H5 Harmonic 123.050000 100.000000
2167     N* CK H5 Harmonic 123.050000 100.000000
2168     NC CQ NC Harmonic 129.100000 140.000000
2169     NC CQ H5 Harmonic 115.450000 100.000000
2170     CT N CT Harmonic 118.000000 100.000000
2171     CT N C Harmonic 121.900000 100.000000
2172     CT N H Harmonic 118.040000 100.000000
2173     C N H Harmonic 120.000000 100.000000
2174     H N H Harmonic 120.000000 70.000000
2175     C NA C Harmonic 126.400000 140.000000
2176     C NA CA Harmonic 125.200000 140.000000
2177     C NA H Harmonic 116.800000 100.000000
2178     CA NA H Harmonic 118.000000 100.000000
2179     CC NA CR Harmonic 120.000000 140.000000
2180     CC NA H Harmonic 120.000000 100.000000
2181     CW NA CR Harmonic 120.000000 140.000000
2182     CW NA CN Harmonic 111.600000 140.000000
2183     CW NA H Harmonic 120.000000 100.000000
2184     CR NA H Harmonic 120.000000 100.000000
2185     CN NA H Harmonic 123.100000 100.000000
2186     CC NB CR Harmonic 117.000000 140.000000
2187     CV NB CR Harmonic 117.000000 140.000000
2188     CB NB CK Harmonic 103.800000 140.000000
2189     C NC CA Harmonic 120.500000 140.000000
2190     CA NC CB Harmonic 112.200000 140.000000
2191     CA NC CQ Harmonic 118.600000 140.000000
2192     CB NC CQ Harmonic 111.000000 140.000000
2193     CT N* C Harmonic 117.600000 140.000000
2194     CT N* CM Harmonic 121.200000 140.000000
2195     CT N* CB Harmonic 125.800000 140.000000
2196     CT N* CK Harmonic 128.800000 140.000000
2197     C N* CM Harmonic 121.600000 140.000000
2198     C N* H Harmonic 119.200000 100.000000
2199     CM N* H Harmonic 121.200000 100.000000
2200     CB N* CK Harmonic 105.400000 140.000000
2201     CB N* H Harmonic 125.800000 100.000000
2202     CK N* H Harmonic 128.800000 100.000000
2203     CT N2 CA Harmonic 123.200000 100.000000
2204     CT N2 H Harmonic 118.400000 100.000000
2205     CA N2 H Harmonic 120.000000 100.000000
2206     H N2 H Harmonic 120.000000 70.000000
2207     CT N3 CT Harmonic 109.500000 100.000000
2208     CT N3 H Harmonic 109.500000 100.000000
2209     H N3 H Harmonic 109.500000 70.000000
2210     HW OW HW Harmonic 104.520000 200.000000
2211     CT OH HO Harmonic 108.500000 110.000000
2212     CA OH HO Harmonic 113.000000 100.000000
2213     P OH HO Harmonic 108.500000 90.000000
2214     CT OS CT Harmonic 109.500000 120.000000
2215     CT OS P Harmonic 120.500000 200.000000
2216     P OS P Harmonic 120.500000 200.000000
2217     CT S CT Harmonic 98.900000 124.000000
2218     CT S S Harmonic 103.700000 136.000000
2219     CT SH HS Harmonic 96.000000 86.000000
2220     HS SH HS Harmonic 92.070000 70.000000
2221     OH P OS Harmonic 102.600000 90.000000
2222     OH P O2 Harmonic 108.230000 90.000000
2223     OS P OS Harmonic 102.600000 90.000000
2224     OS P O2 Harmonic 108.230000 200.000000
2225     O2 P O2 Harmonic 119.900000 280.000000
2226     OW HW HW Harmonic 127.740000 0.000000
2227     end BendTypes
2228    
2229    
2230     begin TorsionTypes
2231     //Atom1 Atom2 Atom3 Atom4 Charmm Kchi n delta [Kchi n delta]
2232     CT CT CT CT Charmm 0.200000 1 180.000000 0.25 2 180 0.18 3 0
2233     CT CT CT C Charmm 0.156000 3 0.000000
2234     CT CT CT N Charmm 0.156000 3 0.000000
2235     CT CT CT N* Charmm 0.156000 3 0.000000
2236     CT CT CT N2 Charmm 0.156000 3 0.000000
2237     CT CT CT N3 Charmm 0.156000 3 0.000000
2238     CT CT CT OH Charmm 0.156000 3 0.000000
2239     CT CT CT OS Charmm 0.156000 3 0.000000
2240     CT CT CT S Charmm 0.156000 3 0.000000
2241     CT CT CT HC Charmm 0.160000 3 0.000000
2242     CT CT CT H1 Charmm 0.156000 3 0.000000
2243     CT CT CT H2 Charmm 0.156000 3 0.000000
2244     CT CT CT HP Charmm 0.156000 3 0.000000
2245     C CT CT C Charmm 0.156000 3 0.000000
2246     C CT CT CA Charmm 0.156000 3 0.000000
2247     C CT CT CC Charmm 0.156000 3 0.000000
2248     C CT CT C* Charmm 0.156000 3 0.000000
2249     C CT CT N Charmm 0.156000 3 0.000000
2250     C CT CT N3 Charmm 0.156000 3 0.000000
2251     C CT CT OH Charmm 0.156000 3 0.000000
2252     C CT CT S Charmm 0.156000 3 0.000000
2253     C CT CT SH Charmm 0.156000 3 0.000000
2254     C CT CT HC Charmm 0.156000 3 0.000000
2255     C CT CT H1 Charmm 0.156000 3 0.000000
2256     C CT CT HP Charmm 0.156000 3 0.000000
2257     CA CT CT N Charmm 0.156000 3 0.000000
2258     CA CT CT N3 Charmm 0.156000 3 0.000000
2259     CA CT CT H1 Charmm 0.156000 3 0.000000
2260     CA CT CT HP Charmm 0.156000 3 0.000000
2261     CC CT CT N Charmm 0.156000 3 0.000000
2262     CC CT CT N3 Charmm 0.156000 3 0.000000
2263     CC CT CT H1 Charmm 0.156000 3 0.000000
2264     CC CT CT HP Charmm 0.156000 3 0.000000
2265     C* CT CT N Charmm 0.156000 3 0.000000
2266     C* CT CT N3 Charmm 0.156000 3 0.000000
2267     C* CT CT H1 Charmm 0.156000 3 0.000000
2268     C* CT CT HP Charmm 0.156000 3 0.000000
2269     N CT CT OH Charmm 0.156000 3 0.000000
2270     N CT CT S Charmm 0.156000 3 0.000000
2271     N CT CT SH Charmm 0.156000 3 0.000000
2272     N CT CT HC Charmm 0.156000 3 0.000000
2273     N CT CT H1 Charmm 0.156000 3 0.000000
2274     N* CT CT OH Charmm 0.156000 3 0.000000
2275     N* CT CT HC Charmm 0.156000 3 0.000000
2276     N* CT CT H1 Charmm 0.156000 3 0.000000
2277     N2 CT CT HC Charmm 0.156000 3 0.000000
2278     N3 CT CT OH Charmm 0.156000 3 0.000000
2279     N3 CT CT S Charmm 0.156000 3 0.000000
2280     N3 CT CT SH Charmm 0.156000 3 0.000000
2281     N3 CT CT HC Charmm 0.156000 3 0.000000
2282     N3 CT CT H1 Charmm 0.156000 3 0.000000
2283     OH CT CT N* Charmm 0.156000 3 0.000000
2284     OH CT CT OH Charmm 0.144000 3 0.000000 1.175 2 0
2285     OH CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2286     OH CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2287     OH CT CT H1 Charmm 0.156000 3 0.000000
2288     OH CT CT H2 Charmm 0.156000 3 0.000000
2289     OH CT CT HP Charmm 0.156000 3 0.000000
2290     OS CT CT OS Charmm 0.144000 3 0.000000 1.175 2 0
2291     OS CT CT HC Charmm 0.156000 3 0.000000 0.25 1 0
2292     OS CT CT H1 Charmm 0.156000 3 0.000000
2293     S CT CT HC Charmm 0.156000 3 0.000000
2294     S CT CT H1 Charmm 0.156000 3 0.000000
2295     S CT CT HP Charmm 0.156000 3 0.000000
2296     SH CT CT H1 Charmm 0.156000 3 0.000000
2297     SH CT CT HP Charmm 0.156000 3 0.000000
2298     HC CT CT HC Charmm 0.150000 3 0.000000
2299     HC CT CT H1 Charmm 0.156000 3 0.000000
2300     HC CT CT H2 Charmm 0.156000 3 0.000000
2301     HC CT CT HP Charmm 0.156000 3 0.000000
2302     H1 CT CT H1 Charmm 0.156000 3 0.000000
2303     H1 CT CT H2 Charmm 0.156000 3 0.000000
2304     H1 CT CT HP Charmm 0.156000 3 0.000000
2305     CT CT C N Charmm 0.070000 2 0.000000 0.1 4 0
2306     CT CT C O Charmm 0.000000 2 0.000000
2307     CT CT C O2 Charmm 0.000000 2 0.000000
2308     N CT C N Charmm 1.700000 1 180.000000 2.0 2 180
2309     N CT C O Charmm 0.000000 2 0.000000
2310     N CT C O2 Charmm 0.000000 2 0.000000
2311     N3 CT C N Charmm 0.000000 2 0.000000
2312     N3 CT C O Charmm 0.000000 2 0.000000
2313     N3 CT C O2 Charmm 0.000000 2 0.000000
2314     HC CT C N Charmm 0.000000 2 0.000000
2315     HC CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2316     HC CT C O2 Charmm 0.000000 2 0.000000
2317     H1 CT C N Charmm 0.000000 2 0.000000
2318     H1 CT C O Charmm 0.800000 1 0.000000 0.08 3 180
2319     H1 CT C O2 Charmm 0.000000 2 0.000000
2320     CT CT CA CA Charmm 0.000000 2 0.000000
2321     HC CT CA CA Charmm 0.000000 2 0.000000
2322     HC CT CM C Charmm 0.000000 3 0.000000
2323     HC CT CM CM Charmm 1.150000 1 0.000000 0.38 3 180
2324     CT CT CC CV Charmm 0.000000 2 0.000000
2325     CT CT CC CW Charmm 0.000000 2 0.000000
2326     CT CT CC NA Charmm 0.000000 2 0.000000
2327     CT CT CC NB Charmm 0.000000 2 0.000000
2328     HC CT CC CV Charmm 0.000000 2 0.000000
2329     HC CT CC CW Charmm 0.000000 2 0.000000
2330     HC CT CC NA Charmm 0.000000 2 0.000000
2331     HC CT CC NB Charmm 0.000000 2 0.000000
2332     CT CT C* CW Charmm 0.000000 2 0.000000
2333     CT CT C* CB Charmm 0.000000 2 0.000000
2334     HC CT C* CW Charmm 0.000000 2 0.000000
2335     HC CT C* CB Charmm 0.000000 2 0.000000
2336     CT CT N CT Charmm 0.000000 2 0.000000
2337     CT CT N C Charmm 0.530000 1 0.000000 0.15 3 180 0.5 4 180
2338     CT CT N H Charmm 0.000000 2 0.000000
2339     C CT N CT Charmm 0.000000 2 0.000000
2340     C CT N C Charmm 0.800000 1 0.000000 0.85 2 180
2341     C CT N H Charmm 0.000000 2 0.000000
2342     H1 CT N CT Charmm 0.000000 2 0.000000
2343     H1 CT N C Charmm 0.000000 2 0.000000
2344     H1 CT N H Charmm 0.000000 2 0.000000
2345     CT CT N* C Charmm 0.000000 2 0.000000
2346     CT CT N* CM Charmm 0.000000 2 0.000000
2347     CT CT N* CB Charmm 0.000000 2 0.000000
2348     CT CT N* CK Charmm 0.000000 2 0.000000
2349     OS CT N* C Charmm 0.000000 2 0.000000
2350     OS CT N* CM Charmm 0.000000 2 180.000000 2.5 1 0
2351     OS CT N* CB Charmm 0.000000 2 0.000000
2352     OS CT N* CK Charmm 0.000000 2 180.000000 2.5 1 0
2353     H2 CT N* C Charmm 0.000000 2 0.000000
2354     H2 CT N* CM Charmm 0.000000 2 0.000000
2355     H2 CT N* CB Charmm 0.000000 2 0.000000
2356     H2 CT N* CK Charmm 0.000000 2 0.000000
2357     CT CT N2 CA Charmm 0.000000 3 0.000000
2358     CT CT N2 H Charmm 0.000000 3 0.000000
2359     H1 CT N2 CA Charmm 0.000000 3 0.000000
2360     H1 CT N2 H Charmm 0.000000 3 0.000000
2361     CT CT N3 CT Charmm 0.156000 3 0.000000
2362     CT CT N3 H Charmm 0.156000 3 0.000000
2363     C CT N3 CT Charmm 0.156000 3 0.000000
2364     C CT N3 H Charmm 0.156000 3 0.000000
2365     H1 CT N3 CT Charmm 0.156000 3 0.000000
2366     H1 CT N3 H Charmm 0.156000 3 0.000000
2367     HP CT N3 CT Charmm 0.156000 3 0.000000
2368     HP CT N3 H Charmm 0.156000 3 0.000000
2369     CT CT OH HO Charmm 0.025000 1 0.000000 0.16 3 0
2370     H1 CT OH HO Charmm 0.167000 3 0.000000
2371     CT CT OS CT Charmm 0.383000 3 0.000000 0.1 2 180
2372     CT CT OS C Charmm 0.383000 3 0.000000 0.8 1 180
2373     CT CT OS P Charmm 0.383000 3 0.000000
2374     N* CT OS CT Charmm 0.383000 3 0.000000 0.65 2 0
2375     OS CT OS CT Charmm 1.350000 1 180.000000 0.85 3 180 0.1 3 0
2376     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2377     OS CT OS CT Charmm 0.850000 2 180.000000 0.1 3 0
2378     H1 CT OS CT Charmm 0.383000 3 0.000000
2379     H1 CT OS P Charmm 0.383000 3 0.000000
2380     H2 CT OS CT Charmm 0.383000 3 0.000000
2381     CT CT S CT Charmm 0.333000 3 0.000000
2382     CT CT S S Charmm 0.333000 3 0.000000
2383     H1 CT S CT Charmm 0.333000 3 0.000000
2384     H1 CT S S Charmm 0.333000 3 0.000000
2385     CT CT SH HS Charmm 0.250000 3 0.000000
2386     H1 CT SH HS Charmm 0.250000 3 0.000000
2387     NA C CM CT Charmm 2.175000 2 180.000000
2388     NA C CM CM Charmm 2.175000 2 180.000000
2389     NA C CM HA Charmm 2.175000 2 180.000000
2390     O C CM CT Charmm 2.175000 2 180.000000
2391     O C CM CM Charmm 2.175000 2 180.000000 0.3 3 0
2392     O C CM HA Charmm 2.175000 2 180.000000
2393     NA C CB CB Charmm 3.000000 2 180.000000
2394     NA C CB NB Charmm 3.000000 2 180.000000
2395     O C CB CB Charmm 3.000000 2 180.000000
2396     O C CB NB Charmm 3.000000 2 180.000000
2397     CT C N CT Charmm 2.500000 2 180.000000
2398     CT C N H Charmm 2.500000 2 180.000000
2399     O C N CT Charmm 2.500000 2 180.000000
2400     O C N H Charmm 2.000000 1 0.000000 2.5 2 180
2401     CM C NA C Charmm 1.350000 2 180.000000
2402     CM C NA H Charmm 1.350000 2 180.000000
2403     CB C NA CA Charmm 1.350000 2 180.000000
2404     CB C NA H Charmm 1.350000 2 180.000000
2405     N* C NA C Charmm 1.350000 2 180.000000
2406     N* C NA H Charmm 1.350000 2 180.000000
2407     O C NA C Charmm 1.350000 2 180.000000
2408     O C NA CA Charmm 1.350000 2 180.000000
2409     O C NA H Charmm 1.350000 2 180.000000
2410     N* C NC CA Charmm 4.000000 2 180.000000
2411     O C NC CA Charmm 4.000000 2 180.000000
2412     NA C N* CT Charmm 1.450000 2 180.000000
2413     NA C N* CM Charmm 1.450000 2 180.000000
2414     NC C N* CT Charmm 1.450000 2 180.000000
2415     NC C N* CM Charmm 1.450000 2 180.000000
2416     O C N* CT Charmm 1.450000 2 180.000000
2417     O C N* CM Charmm 1.450000 2 180.000000
2418     O C OH HO Charmm 1.900000 1 0.000000 2.3 2 180
2419     O C OS CT Charmm 1.400000 1 180.000000 2.7 2 180
2420     CT CA CA CA Charmm 3.625000 2 180.000000
2421     CT CA CA HA Charmm 3.625000 2 180.000000
2422     CA CA CA CA Charmm 3.625000 2 180.000000
2423     CA CA CA CB Charmm 3.625000 2 180.000000
2424     CA CA CA CN Charmm 3.625000 2 180.000000
2425     CA CA CA OH Charmm 3.625000 2 180.000000
2426     CA CA CA HA Charmm 3.625000 2 180.000000
2427     CB CA CA HA Charmm 3.625000 2 180.000000
2428     CN CA CA HA Charmm 3.625000 2 180.000000
2429     OH CA CA HA Charmm 3.625000 2 180.000000
2430     HA CA CA HA Charmm 3.625000 2 180.000000
2431     NC CA CM CM Charmm 2.550000 2 180.000000
2432     NC CA CM HA Charmm 2.550000 2 180.000000
2433     N2 CA CM CM Charmm 2.550000 2 180.000000
2434     N2 CA CM HA Charmm 2.550000 2 180.000000
2435     CA CA CB C* Charmm 3.500000 2 180.000000
2436     CA CA CB CN Charmm 3.500000 2 180.000000
2437     NC CA CB CB Charmm 3.500000 2 180.000000
2438     NC CA CB NB Charmm 3.500000 2 180.000000
2439     N2 CA CB CB Charmm 3.500000 2 180.000000
2440     N2 CA CB NB Charmm 3.500000 2 180.000000
2441     HA CA CB C* Charmm 3.500000 2 180.000000
2442     HA CA CB CN Charmm 3.500000 2 180.000000
2443     CA CA CN CB Charmm 3.625000 2 180.000000
2444     CA CA CN NA Charmm 3.625000 2 180.000000
2445     HA CA CN CB Charmm 3.625000 2 180.000000
2446     HA CA CN NA Charmm 3.625000 2 180.000000
2447     NC CA NA C Charmm 1.500000 2 180.000000
2448     NC CA NA H Charmm 1.500000 2 180.000000
2449     N2 CA NA C Charmm 1.500000 2 180.000000
2450     N2 CA NA H Charmm 1.500000 2 180.000000
2451     CM CA NC C Charmm 4.800000 2 180.000000
2452     CB CA NC CQ Charmm 4.800000 2 180.000000
2453     NA CA NC CB Charmm 4.800000 2 180.000000
2454     N2 CA NC C Charmm 4.800000 2 180.000000
2455     N2 CA NC CB Charmm 4.800000 2 180.000000
2456     N2 CA NC CQ Charmm 4.800000 2 180.000000
2457     CM CA N2 H Charmm 2.400000 2 180.000000
2458     CB CA N2 H Charmm 2.400000 2 180.000000
2459     NA CA N2 H Charmm 2.400000 2 180.000000
2460     NC CA N2 H Charmm 2.400000 2 180.000000
2461     N2 CA N2 CT Charmm 2.400000 2 180.000000
2462     N2 CA N2 H Charmm 2.400000 2 180.000000
2463     CA CA OH HO Charmm 0.900000 2 180.000000
2464     CT CM CM CT Charmm 1.900000 1 180.000000 6.65 2 180
2465     CT CM CM N* Charmm 6.650000 2 180.000000
2466     CT CM CM H4 Charmm 6.650000 2 180.000000
2467     C CM CM N* Charmm 6.650000 2 180.000000
2468     C CM CM H4 Charmm 6.650000 2 180.000000
2469     CA CM CM N* Charmm 6.650000 2 180.000000
2470     CA CM CM H4 Charmm 6.650000 2 180.000000
2471     HA CM CM N* Charmm 6.650000 2 180.000000
2472     HA CM CM H4 Charmm 6.650000 2 180.000000
2473     CM CM N* CT Charmm 1.850000 2 180.000000
2474     CM CM N* C Charmm 1.850000 2 180.000000
2475     H4 CM N* CT Charmm 1.850000 2 180.000000
2476     H4 CM N* C Charmm 1.850000 2 180.000000
2477     CT CC CV NB Charmm 5.150000 2 180.000000
2478     CT CC CV H4 Charmm 5.150000 2 180.000000
2479     NA CC CV NB Charmm 5.150000 2 180.000000
2480     NA CC CV H4 Charmm 5.150000 2 180.000000
2481     CT CC CW NA Charmm 5.375000 2 180.000000
2482     CT CC CW H4 Charmm 5.375000 2 180.000000
2483     NA CC CW NA Charmm 5.375000 2 180.000000
2484     NA CC CW H4 Charmm 5.375000 2 180.000000
2485     NB CC CW NA Charmm 5.375000 2 180.000000
2486     NB CC CW H4 Charmm 5.375000 2 180.000000
2487     CT CC NA CR Charmm 1.400000 2 180.000000
2488     CT CC NA H Charmm 1.400000 2 180.000000
2489     CV CC NA CR Charmm 1.400000 2 180.000000
2490     CV CC NA H Charmm 1.400000 2 180.000000
2491     CW CC NA CR Charmm 1.400000 2 180.000000
2492     CW CC NA H Charmm 1.400000 2 180.000000
2493     CT CC NB CR Charmm 2.400000 2 180.000000
2494     CW CC NB CR Charmm 2.400000 2 180.000000
2495     CC CV NB CR Charmm 2.400000 2 180.000000
2496     H4 CV NB CR Charmm 2.400000 2 180.000000
2497     NA CW C* CT Charmm 6.525000 2 180.000000
2498     NA CW C* CB Charmm 6.525000 2 180.000000
2499     H4 CW C* CT Charmm 6.525000 2 180.000000
2500     H4 CW C* CB Charmm 6.525000 2 180.000000
2501     CC CW NA CR Charmm 1.500000 2 180.000000
2502     CC CW NA H Charmm 1.500000 2 180.000000
2503     C* CW NA CN Charmm 1.500000 2 180.000000
2504     C* CW NA H Charmm 1.500000 2 180.000000
2505     H4 CW NA CR Charmm 1.500000 2 180.000000
2506     H4 CW NA CN Charmm 1.500000 2 180.000000
2507     H4 CW NA H Charmm 1.500000 2 180.000000
2508     NA CR NA CC Charmm 2.325000 2 180.000000
2509     NA CR NA CW Charmm 2.325000 2 180.000000
2510     NA CR NA H Charmm 2.325000 2 180.000000
2511     NB CR NA CC Charmm 2.325000 2 180.000000
2512     NB CR NA CW Charmm 2.325000 2 180.000000
2513     NB CR NA H Charmm 2.325000 2 180.000000
2514     H5 CR NA CC Charmm 2.325000 2 180.000000
2515     H5 CR NA CW Charmm 2.325000 2 180.000000
2516     H5 CR NA H Charmm 2.325000 2 180.000000
2517     NA CR NB CC Charmm 5.000000 2 180.000000
2518     NA CR NB CV Charmm 5.000000 2 180.000000
2519     H5 CR NB CC Charmm 5.000000 2 180.000000
2520     H5 CR NB CV Charmm 5.000000 2 180.000000
2521     C CB CB NC Charmm 5.450000 2 180.000000
2522     C CB CB N* Charmm 5.450000 2 180.000000
2523     CA CB CB NC Charmm 5.450000 2 180.000000
2524     CA CB CB N* Charmm 5.450000 2 180.000000
2525     NB CB CB NC Charmm 5.450000 2 180.000000
2526     NB CB CB N* Charmm 5.450000 2 180.000000
2527     CA CB C* CT Charmm 1.675000 2 180.000000
2528     CA CB C* CW Charmm 1.675000 2 180.000000
2529     CN CB C* CT Charmm 1.675000 2 180.000000
2530     CN CB C* CW Charmm 1.675000 2 180.000000
2531     CA CB CN CA Charmm 3.000000 2 180.000000
2532     CA CB CN NA Charmm 3.000000 2 180.000000
2533     C* CB CN CA Charmm 3.000000 2 180.000000
2534     C* CB CN NA Charmm 3.000000 2 180.000000
2535     C CB NB CK Charmm 2.550000 2 180.000000
2536     CA CB NB CK Charmm 2.550000 2 180.000000
2537     CB CB NB CK Charmm 2.550000 2 180.000000
2538     CB CB NC CA Charmm 4.150000 2 180.000000
2539     CB CB NC CQ Charmm 4.150000 2 180.000000
2540     N* CB NC CA Charmm 4.150000 2 180.000000
2541     N* CB NC CQ Charmm 4.150000 2 180.000000
2542     CB CB N* CT Charmm 1.650000 2 180.000000
2543     CB CB N* CK Charmm 1.650000 2 180.000000
2544     NC CB N* CT Charmm 1.650000 2 180.000000
2545     NC CB N* CK Charmm 1.650000 2 180.000000
2546     CA CN NA CW Charmm 1.525000 2 180.000000
2547     CA CN NA H Charmm 1.525000 2 180.000000
2548     CB CN NA CW Charmm 1.525000 2 180.000000
2549     CB CN NA H Charmm 1.525000 2 180.000000
2550     N* CK NB CB Charmm 10.000000 2 180.000000
2551     H5 CK NB CB Charmm 10.000000 2 180.000000
2552     NB CK N* CT Charmm 1.700000 2 180.000000
2553     NB CK N* CB Charmm 1.700000 2 180.000000
2554     H5 CK N* CT Charmm 1.700000 2 180.000000
2555     H5 CK N* CB Charmm 1.700000 2 180.000000
2556     NC CQ NC CA Charmm 6.800000 2 180.000000
2557     NC CQ NC CB Charmm 6.800000 2 180.000000
2558     H5 CQ NC CA Charmm 6.800000 2 180.000000
2559     H5 CQ NC CB Charmm 6.800000 2 180.000000
2560     HO OH P OS Charmm 0.250000 3 0.000000
2561     HO OH P O2 Charmm 0.250000 3 0.000000
2562     CT OS P OH Charmm 0.250000 3 0.000000 1.2 2 0
2563     CT OS P OS Charmm 0.250000 3 0.000000 1.2 2 0
2564     CT OS P O2 Charmm 0.250000 3 0.000000
2565     CT S S CT Charmm 3.500000 2 0.000000 0.6 3 0
2566     end TorsionTypes
2567    
2568    
2569     begin Improper TorsionTypes
2570     CT N C O 10.500000 2 180.000000
2571     CM NA C O 10.500000 2 180.000000
2572     CB NA C O 10.500000 2 180.000000
2573     N* NA C O 10.500000 2 180.000000
2574     CT O2 C O2 10.500000 2 180.000000
2575     CA CA CA CT 1.100000 2 180.000000
2576     CA CA CA OH 1.100000 2 180.000000
2577     CA CA CA HA 1.100000 2 180.000000
2578     CN CA CA HA 1.100000 2 180.000000
2579     NC CM CA N2 1.100000 2 180.000000
2580     CA CB CA HA 1.100000 2 180.000000
2581     CB NC CA N2 1.100000 2 180.000000
2582     NA NC CA N2 1.100000 2 180.000000
2583     N2 N2 CA N2 10.500000 2 180.000000
2584     CM CA CM HA 1.100000 2 180.000000
2585     C CM CM CT 1.100000 2 180.000000
2586     C CM CM HA 1.100000 2 180.000000
2587     N* CM CM H4 1.100000 2 180.000000
2588     NA CV CC CT 1.100000 2 180.000000
2589     NA CW CC CT 1.100000 2 180.000000
2590     NB CW CC CT 1.100000 2 180.000000
2591     CC NB CV H4 1.100000 2 180.000000
2592     CC NA CW H4 1.100000 2 180.000000
2593     C* NA CW H4 1.100000 2 180.000000
2594     NA NA CR H5 1.100000 2 180.000000
2595     NB NA CR H5 1.100000 2 180.000000
2596     NA NB CR H5 1.100000 2 180.000000
2597     CW CB C* CT 1.100000 2 180.000000
2598     NB N* CK H5 1.100000 2 180.000000
2599     NC NC CQ H5 1.100000 2 180.000000
2600     C CT N CT 1.000000 2 180.000000
2601     C CT N H 1.000000 2 180.000000
2602     C H N H 1.000000 2 180.000000
2603     C C NA H 1.000000 2 180.000000
2604     C CA NA H 1.000000 2 180.000000
2605     CR CW NA H 1.000000 2 180.000000
2606     CC CR NA H 1.000000 2 180.000000
2607     CW CN NA H 1.000000 2 180.000000
2608     CM C N* CT 1.000000 2 180.000000
2609     CK CB N* CT 1.000000 2 180.000000
2610     CT CA N2 H 1.000000 2 180.000000
2611     CA H N2 H 1.000000 2 180.000000
2612     end Improper TorsionTypes
2613