ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/group/trunk/OOPSE-4/forceFields/CLAYFF.frc
Revision: 3471
Committed: Thu Oct 30 15:10:49 2008 UTC (15 years, 8 months ago) by gezelter
File size: 3899 byte(s)
Log Message:
fixed a few bugs in the options, added base atom types

File Contents

# Content
1 // This is the forcefield file for the Clay Force Field (CLAYFF)
2 //
3 // Details can be found in the following article:
4 //
5 // "Molecular Models of Hydroxide, Oxyhydroxid, and Clay Phases and
6 // the Development of a General Force Field" by Randall T. Cygan,
7 // Jian-Jie Liang, and Andrey G. Kalinichev, J. Phys. Chem. B 108,
8 // pp. 1255-1266 (2004).
9 //
10 // This file defines the following atom types:
11 //
12 // h* water hydrogen
13 // ho hydroxyl hydrogen
14 // o* water oxygen
15 // oh hydroxyl oxygen
16 // ob bridging oxygen
17 // obos bridging oxygen with octahedral substitution
18 // obts bridging oxygen with tetrahedral substitution
19 // obss bridging oxygen with double substitution
20 // ohs hydroxyl oxygen with substitution
21 // st tetrahedral silicon
22 // ao octahedral aluminum
23 // at tetrahedral aluminum
24 // mgo octahedral magnesium
25 // mgh hydroxide magnesium
26 // cao octahedral calcium
27 // cah hydroxide calcium
28 // feo octahedral iron
29 // lio octahedral lithium
30 // Na aqueous sodium ion
31 // K aqueous potassium ion
32 // Cs aqueous cesium ion
33 // Ca aqueous calcium ion
34 // Ba aqueous barium ion
35 // Cl aqueous chloride ion
36
37 begin Options
38 Name "CLAYFF"
39 vdWtype Lennard-Jones
40 DistanceMixingRule arithmetic
41 DistanceType Rmin
42 EnergyMixingRule Geometric
43 end Options
44
45 begin BaseAtomTypes
46 //Name mass (amu)
47 H 1.0079
48 O 15.9994
49 Si 28.0855
50 Al 26.981538
51 Mg 24.3050
52 Ca 40.078
53 Fe 55.845
54 Li 6.941
55 Na 22.98977
56 K 39.0983
57 Cs 132.90545
58 Ca 40.078
59 Ba 137.327
60 Cl 35.453
61 end BaseAtomTypes
62
63 begin AtomTypes
64 //Name baseatomtype
65 h* H
66 ho H
67 o* O
68 oh O
69 ob O
70 obos O
71 obts O
72 obss O
73 ohs O
74 st Si
75 ao Al
76 at Al
77 mgo Mg
78 mgh Mg
79 cao Ca
80 cah Ca
81 feo Fe
82 lio Li
83 end AtomTypes
84
85 begin LennardJonesAtomTypes
86 //Name epsilon R0
87 o* 0.1554 3.5532
88 oh 0.1554 3.5532
89 ob 0.1554 3.5532
90 obos 0.1554 3.5532
91 obts 0.1554 3.5532
92 obss 0.1554 3.5532
93 ohs 0.1554 3.5532
94 st 1.8405e-6 3.7064
95 ao 1.3298e-6 4.7943
96 at 1.8405e-6 3.7064
97 mgo 9.0298e-7 5.9090
98 mgh 9.0298e-7 5.9090
99 cao 5.0298e-6 6.2484
100 cah 5.0298e-6 6.2428
101 feo 9.0298e-6 5.5070
102 lio 9.0298e-6 4.7257
103 Na 0.1301 2.6378
104 K 0.1000 3.7423
105 Cs 0.1000 4.3002
106 Ca 0.1000 3.2237
107 Ba 0.0470 4.2840
108 Cl 0.1001 4.9388
109 end LennardJonesAtomTypes
110
111 begin ChargeAtomTypes
112 // Name charge
113 h* 0.4100
114 ho 0.4250
115 o* -0.8200
116 oh -0.9500
117 ob -1.0500
118 obos -1.1808
119 obts -1.1688
120 obss -1.2996
121 ohs -1.0808
122 st 2.1000
123 ao 1.5750
124 at 1.5750
125 mgo 1.3600
126 mgh 1.0500
127 cao 1.3600
128 cah 1.0500
129 feo 1.5750
130 lio 0.5250
131 Na 1.0
132 K 1.0
133 Cs 1.0
134 Ca 2.0
135 Ba 2.0
136 Cl -1.0
137 end ChargeAtomTypes
138
139 begin BondTypes
140
141 //Atom1 Atom2 Harmonic b0 Kb (kcal/mol)
142 //V_Harmonic = 0.5*Kb(b- bo)^2
143
144 o* h* Harmonic 1.0000 277.06745
145 oh ho Harmonic 1.0000 277.06745
146 ohs ho Harmonic 1.0000 277.06745
147
148 end BondTypes
149
150 begin BendTypes
151
152 //Harmonic
153 //Atom1 Atom2 Atom3 Harmonic Theta0 Ktheta
154 //V_Harmonic = 0.5*Ktheta(Theta - Theta0)^2
155 //Ktheta: kcal/mole/rad**2
156 //Theta0: degrees
157
158 h* o* h* Harmonic 109.47 22.8848
159 ao oh ho Harmonic 109.47 15.0
160 ao ohs ho Harmonic 109.47 15.0
161 at oh ho Harmonic 109.47 15.0
162 at ohs ho Harmonic 109.47 15.0
163 mgh oh ho Harmonic 109.47 15.0
164 mgh ohs ho Harmonic 109.47 15.0
165 cah oh ho Harmonic 109.47 15.0
166 cah ohs ho Harmonic 109.47 15.0
167 feo oh ho Harmonic 109.47 15.0
168 feo ohs ho Harmonic 109.47 15.0
169 lio oh ho Harmonic 109.47 15.0
170 lio ohs ho Harmonic 109.47 15.0
171
172 end BendTypes