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root/group/trunk/OOPSE-4/samples/dipole/split_SSD.md
Revision: 2990
Committed: Thu Aug 31 20:12:12 2006 UTC (17 years, 10 months ago) by chrisfen
File size: 1287 byte(s)
Log Message:
converted samples over to the OOPSE-4 file format

Fixed an MPI bug in thermodynamic integration

File Contents

# Content
1 <OOPSE version=4>
2 <MetaData>
3 #include "splitDipole.md"
4 #include "water.md"
5
6
7 component{
8 type = "HEAD";
9 nMol = 1;
10 }
11
12 component{
13 type = "SSD";
14 nMol = 1;
15 }
16
17
18
19 ensemble = NVT;
20 forceField = "DUFF";
21 forceFieldFileName = "Lipid.frc";
22 electrostaticSummationMethod = "none";
23 dielectric = 80.0;
24 cutoffRadius = 9.0;
25 switchingRadius = 7.8;
26
27
28
29 targetTemp = 100.0;
30 targetPressure = 1.0;
31
32 tauThermostat = 1e3;
33 tauBarostat = 1e4;
34
35 dt = 1.0;
36 runTime = 1e5;
37
38 sampleTime = 1e2;
39 statusTime = 10;
40 useInitialTime = "false";
41 useInitialExtendedSystemState = "false";
42 </MetaData>
43 <Snapshot>
44 <FrameData>
45 Time: 100000
46 Hmat: {{ 59.7166, 0, 0 }, { 0, 59.7166, 0 }, { 0, 0, 59.7166 }}
47 Thermostat: 0.143595 , 14398.3
48 Barostat: {{ 0, 0, 0 }, { 0, 0, 0 }, { 0, 0, 0 }}
49 </FrameData>
50 <StuntDoubles>
51 0 pvqj 1.190942 0.027501 -0.023832 -0.000000e+00 0.000000e+00 -0.000000e+00 7.267000e-03 1.466900e-02 -1.820000e-04 9.998660e-01 -0.000000e+00 0.000000e+00 0.000000e+00
52 1 pvqj 4.295467 -0.008031 0.435229 0.000000e+00 -0.000000e+00 0.000000e+00 3.628000e-03 9.898270e-01 1.401060e-01 2.447900e-02 -0.000000e+00 0.000000e+00 -0.000000e+00
53 </StuntDoubles>
54 </Snapshot>
55 </OOPSE>