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root/group/trunk/OOPSE-4/samples/dipole/twoSplitDipole.md
Revision: 2990
Committed: Thu Aug 31 20:12:12 2006 UTC (17 years, 10 months ago) by chrisfen
File size: 1224 byte(s)
Log Message:
converted samples over to the OOPSE-4 file format

Fixed an MPI bug in thermodynamic integration

File Contents

# User Rev Content
1 chrisfen 2990 <OOPSE version=4>
2     <MetaData>
3 tim 2106 #include "splitDipole.md"
4    
5 tim 2489
6 tim 2106 component{
7     type = "HEAD";
8     nMol = 2;
9     }
10    
11    
12    
13     ensemble = NVT;
14     forceField = "DUFF";
15     forceFieldFileName = "Lipid.frc";
16 chrisfen 2311 electrostaticSummationMethod = "none";
17 tim 2106 dielectric = 80.0;
18     cutoffRadius = 9.0;
19     switchingRadius = 7.8;
20    
21    
22 tim 2489
23 gezelter 2112 targetTemp = 10.0;
24 tim 2106 targetPressure = 1.0;
25    
26     tauThermostat = 1e4;
27     tauBarostat = 1e4;
28    
29     dt = 1.0;
30     runTime = 1e5;
31    
32     sampleTime = 1e2;
33     statusTime = 10;
34     useInitialTime = "false";
35     useInitialExtendedSystemState = "false";
36 chrisfen 2990 </MetaData>
37     <Snapshot>
38     <FrameData>
39     Time: 100000
40     Hmat: {{ 59.7166, 0, 0 }, { 0, 59.7166, 0 }, { 0, 0, 59.7166 }}
41     Thermostat: 0.180892 , 17199.4
42     Barostat: {{ 0, 0, 0 }, { 0, 0, 0 }, { 0, 0, 0 }}
43     </FrameData>
44     <StuntDoubles>
45     0 pvqj -0.899838 0.02164 0.474136 0.000000e+00 0.000000e+00 1.000000e-06 1.437000e-02 -2.267950e-01 -7.380000e-04 9.738360e-01 -2.600000e-05 1.004000e-03 -0.000000e+00
46     1 pvqj 7.899838 -0.02164 -0.474136 -0.000000e+00 -0.000000e+00 -1.000000e-06 2.057000e-03 5.045000e-02 1.571000e-03 -9.987230e-01 -0.000000e+00 -5.000000e-06 0.000000e+00
47     </StuntDoubles>
48     </Snapshot>
49     </OOPSE>