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root/group/trunk/OOPSE-4/samples/dipole/twoSplitDipole.md
Revision: 2990
Committed: Thu Aug 31 20:12:12 2006 UTC (17 years, 10 months ago) by chrisfen
File size: 1224 byte(s)
Log Message:
converted samples over to the OOPSE-4 file format

Fixed an MPI bug in thermodynamic integration

File Contents

# Content
1 <OOPSE version=4>
2 <MetaData>
3 #include "splitDipole.md"
4
5
6 component{
7 type = "HEAD";
8 nMol = 2;
9 }
10
11
12
13 ensemble = NVT;
14 forceField = "DUFF";
15 forceFieldFileName = "Lipid.frc";
16 electrostaticSummationMethod = "none";
17 dielectric = 80.0;
18 cutoffRadius = 9.0;
19 switchingRadius = 7.8;
20
21
22
23 targetTemp = 10.0;
24 targetPressure = 1.0;
25
26 tauThermostat = 1e4;
27 tauBarostat = 1e4;
28
29 dt = 1.0;
30 runTime = 1e5;
31
32 sampleTime = 1e2;
33 statusTime = 10;
34 useInitialTime = "false";
35 useInitialExtendedSystemState = "false";
36 </MetaData>
37 <Snapshot>
38 <FrameData>
39 Time: 100000
40 Hmat: {{ 59.7166, 0, 0 }, { 0, 59.7166, 0 }, { 0, 0, 59.7166 }}
41 Thermostat: 0.180892 , 17199.4
42 Barostat: {{ 0, 0, 0 }, { 0, 0, 0 }, { 0, 0, 0 }}
43 </FrameData>
44 <StuntDoubles>
45 0 pvqj -0.899838 0.02164 0.474136 0.000000e+00 0.000000e+00 1.000000e-06 1.437000e-02 -2.267950e-01 -7.380000e-04 9.738360e-01 -2.600000e-05 1.004000e-03 -0.000000e+00
46 1 pvqj 7.899838 -0.02164 -0.474136 -0.000000e+00 -0.000000e+00 -1.000000e-06 2.057000e-03 5.045000e-02 1.571000e-03 -9.987230e-01 -0.000000e+00 -5.000000e-06 0.000000e+00
47 </StuntDoubles>
48 </Snapshot>
49 </OOPSE>