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root/group/trunk/OOPSE-4/samples/water/dimer/cl.md
Revision: 2990
Committed: Thu Aug 31 20:12:12 2006 UTC (17 years, 10 months ago) by chrisfen
File size: 1169 byte(s)
Log Message:
converted samples over to the OOPSE-4 file format

Fixed an MPI bug in thermodynamic integration

File Contents

# User Rev Content
1 chrisfen 2990 <OOPSE version=4>
2     <MetaData>
3 gezelter 2092 #include "water.md"
4    
5 tim 2489
6 gezelter 2092 component{
7 chrisfen 2294 type = "Cl-";
8 gezelter 2092 nMol = 1;
9     }
10     component{
11 chrisfen 2294 type = "SSD_E";
12 gezelter 2092 nMol = 1;
13     }
14    
15    
16    
17     ensemble = NVT;
18 chrisfen 2326 forceField = "DUFF";
19 chrisfen 2338 electrostaticSummationMethod = "none";
20 gezelter 2092 dielectric = 80.0;
21     cutoffRadius = 9.0;
22     switchingRadius = 7.8;
23    
24    
25 tim 2489
26 gezelter 2092 targetTemp = 0.001;
27     targetPressure = 1.0;
28    
29     tauThermostat = 1e4;
30     tauBarostat = 1e4;
31    
32     dt = 1.0;
33 chrisfen 2155 runTime = 1e3;
34 gezelter 2092
35 chrisfen 2155 sampleTime = 10;
36     statusTime = 1;
37 gezelter 2092 useInitialTime = "false";
38     useInitialExtendedSystemState = "false";
39 chrisfen 2155
40     //tempSet = "true";
41     //thermalTime = 100;
42 chrisfen 2990 </MetaData>
43     <Snapshot>
44     <FrameData>
45     Time: 1000
46     Hmat: {{ 59.7166, 0, 0 }, { 0, 59.7166, 0 }, { 0, 0, 59.7166 }}
47     Thermostat: 0.0385672 , 36.2096
48     Barostat: {{ 0, 0, 0 }, { 0, 0, 0 }, { 0, 0, 0 }}
49     </FrameData>
50     <StuntDoubles>
51     0 pv 4.596242 0.717716 -0.489407 0.000000e+00 0.000000e+00 -0.000000e+00
52     1 pvqj 1.81745 -1.440934 0.945913 -0.000000e+00 -0.000000e+00 0.000000e+00 2.831510e-01 -6.511590e-01 -5.879580e-01 -3.874570e-01 -0.000000e+00 -0.000000e+00 0.000000e+00
53     </StuntDoubles>
54     </Snapshot>
55     </OOPSE>