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root/group/trunk/OOPSE-4/samples/water/dimer/mix2.md
Revision: 2990
Committed: Thu Aug 31 20:12:12 2006 UTC (17 years, 10 months ago) by chrisfen
File size: 1175 byte(s)
Log Message:
converted samples over to the OOPSE-4 file format

Fixed an MPI bug in thermodynamic integration

File Contents

# User Rev Content
1 chrisfen 2990 <OOPSE version=4>
2     <MetaData>
3 gezelter 2092 #include "water.md"
4    
5 tim 2489
6 gezelter 2092 component{
7     type = "SSD_E";
8     nMol = 1;
9     }
10     component{
11     type = "TIP4P";
12     nMol = 1;
13     }
14    
15    
16    
17     ensemble = NVT;
18 chrisfen 2338 forceField = "DUFF";
19     electrostaticSummationMethod = "none";
20 gezelter 2092 dielectric = 80.0;
21     cutoffRadius = 9.0;
22     switchingRadius = 7.8;
23    
24    
25 tim 2489
26 gezelter 2092 targetTemp = 0.001;
27     targetPressure = 1.0;
28    
29     tauThermostat = 1e4;
30     tauBarostat = 1e4;
31    
32     dt = 1.0;
33     runTime = 1e5;
34    
35     sampleTime = 1e2;
36     statusTime = 10;
37     useInitialTime = "false";
38     useInitialExtendedSystemState = "false";
39 chrisfen 2990 </MetaData>
40     <Snapshot>
41     <FrameData>
42     Time: 99991
43     Hmat: {{ 59.7166, 0, 0 }, { 0, 59.7166, 0 }, { 0, 0, 59.7166 }}
44     Thermostat: -0.00400019 , 11.42
45     </FrameData>
46     <StuntDoubles>
47     0 pvqj 3.860995 -0.02947 -0.017771 -8.100000e-05 2.510000e-04 -2.200000e-05 7.059430e-01 1.780690e-01 -5.268640e-01 4.385770e-01 -1.064400e-02 2.690000e-03 1.290000e-04
48     1 pvqj 1.139005 0.02947 0.017771 8.100000e-05 -2.510000e-04 2.200000e-05 6.728890e-01 -5.173170e-01 -5.134360e-01 1.264420e-01 1.472000e-03 3.632000e-03 -9.030000e-04
49     </StuntDoubles>
50     </Snapshot>
51     </OOPSE>