ViewVC Help
View File | Revision Log | Show Annotations | View Changeset | Root Listing
root/group/trunk/OOPSE-4/samples/water/dimer/tap.md
Revision: 2990
Committed: Thu Aug 31 20:12:12 2006 UTC (17 years, 10 months ago) by chrisfen
File size: 1182 byte(s)
Log Message:
converted samples over to the OOPSE-4 file format

Fixed an MPI bug in thermodynamic integration

File Contents

# User Rev Content
1 chrisfen 2990 <OOPSE version=4>
2     <MetaData>
3 chrisfen 2248 #include "water.md"
4    
5 tim 2489
6 chrisfen 2248 component{
7     type = "TAP";
8     nMol = 2;
9     }
10    
11    
12    
13     ensemble = NVT;
14 chrisfen 2326 forceField = "DUFF";
15 chrisfen 2338 electrostaticSummationMethod = "none";
16 chrisfen 2248 dielectric = 80.0;
17     cutoffRadius = 9.0;
18     switchingRadius = 7.8;
19    
20    
21 tim 2489
22 chrisfen 2248 targetTemp = 0.1;
23     targetPressure = 1.0;
24    
25     tauThermostat = 1e4;
26     tauBarostat = 1e4;
27    
28     dt = 1.0;
29     runTime = 1e4;
30    
31     sampleTime = 1e2;
32     statusTime = 10;
33     useInitialTime = "false";
34     useInitialExtendedSystemState = "false";
35 chrisfen 2990 </MetaData>
36     <Snapshot>
37     <FrameData>
38     Time: 10000
39     Hmat: {{ 59.7166, 0, 0 }, { 0, 59.7166, 0 }, { 0, 0, 59.7166 }}
40     Thermostat: 0.0208838 , 207.625
41     Barostat: {{ 0, 0, 0 }, { 0, 0, 0 }, { 0, 0, 0 }}
42     </FrameData>
43     <StuntDoubles>
44     0 pvqj 1.118261 0.030441 0.007695 0.000000e+00 -0.000000e+00 -0.000000e+00 6.682090e-01 -6.132790e-01 -3.089100e-01 2.862860e-01 -0.000000e+00 -0.000000e+00 0.000000e+00
45     1 pvqj 3.881739 -0.030441 -0.007695 -0.000000e+00 0.000000e+00 -0.000000e+00 6.207330e-01 3.413810e-01 -6.447840e-01 2.870600e-01 -0.000000e+00 -0.000000e+00 -0.000000e+00
46     </StuntDoubles>
47     </Snapshot>
48     </OOPSE>