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root/group/trunk/OOPSE-4/samples/water/dimer/tap.md
Revision: 2990
Committed: Thu Aug 31 20:12:12 2006 UTC (17 years, 9 months ago) by chrisfen
File size: 1182 byte(s)
Log Message:
converted samples over to the OOPSE-4 file format

Fixed an MPI bug in thermodynamic integration

File Contents

# Content
1 <OOPSE version=4>
2 <MetaData>
3 #include "water.md"
4
5
6 component{
7 type = "TAP";
8 nMol = 2;
9 }
10
11
12
13 ensemble = NVT;
14 forceField = "DUFF";
15 electrostaticSummationMethod = "none";
16 dielectric = 80.0;
17 cutoffRadius = 9.0;
18 switchingRadius = 7.8;
19
20
21
22 targetTemp = 0.1;
23 targetPressure = 1.0;
24
25 tauThermostat = 1e4;
26 tauBarostat = 1e4;
27
28 dt = 1.0;
29 runTime = 1e4;
30
31 sampleTime = 1e2;
32 statusTime = 10;
33 useInitialTime = "false";
34 useInitialExtendedSystemState = "false";
35 </MetaData>
36 <Snapshot>
37 <FrameData>
38 Time: 10000
39 Hmat: {{ 59.7166, 0, 0 }, { 0, 59.7166, 0 }, { 0, 0, 59.7166 }}
40 Thermostat: 0.0208838 , 207.625
41 Barostat: {{ 0, 0, 0 }, { 0, 0, 0 }, { 0, 0, 0 }}
42 </FrameData>
43 <StuntDoubles>
44 0 pvqj 1.118261 0.030441 0.007695 0.000000e+00 -0.000000e+00 -0.000000e+00 6.682090e-01 -6.132790e-01 -3.089100e-01 2.862860e-01 -0.000000e+00 -0.000000e+00 0.000000e+00
45 1 pvqj 3.881739 -0.030441 -0.007695 -0.000000e+00 0.000000e+00 -0.000000e+00 6.207330e-01 3.413810e-01 -6.447840e-01 2.870600e-01 -0.000000e+00 -0.000000e+00 -0.000000e+00
46 </StuntDoubles>
47 </Snapshot>
48 </OOPSE>