40 |
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!! |
41 |
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42 |
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module electrostatic_module |
43 |
< |
|
43 |
> |
|
44 |
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use force_globals |
45 |
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use definitions |
46 |
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use atype_module |
47 |
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use vector_class |
48 |
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use simulation |
49 |
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use status |
50 |
+ |
use interpolation |
51 |
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#ifdef IS_MPI |
52 |
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use mpiSimulation |
53 |
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#endif |
55 |
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56 |
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PRIVATE |
57 |
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58 |
+ |
|
59 |
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#define __FORTRAN90 |
60 |
+ |
#include "UseTheForce/DarkSide/fInteractionMap.h" |
61 |
+ |
#include "UseTheForce/DarkSide/fElectrostaticSummationMethod.h" |
62 |
+ |
#include "UseTheForce/DarkSide/fElectrostaticScreeningMethod.h" |
63 |
+ |
|
64 |
+ |
|
65 |
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!! these prefactors convert the multipole interactions into kcal / mol |
66 |
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!! all were computed assuming distances are measured in angstroms |
67 |
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!! Charge-Charge, assuming charges are measured in electrons |
76 |
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!! This unit is also known affectionately as an esu centi-barn. |
77 |
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real(kind=dp), parameter :: pre14 = 69.13373_dp |
78 |
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|
79 |
+ |
real(kind=dp), parameter :: zero = 0.0_dp |
80 |
+ |
|
81 |
+ |
!! number of points for electrostatic splines |
82 |
+ |
integer, parameter :: np = 100 |
83 |
+ |
|
84 |
+ |
!! variables to handle different summation methods for long-range |
85 |
+ |
!! electrostatics: |
86 |
+ |
integer, save :: summationMethod = NONE |
87 |
+ |
integer, save :: screeningMethod = UNDAMPED |
88 |
+ |
logical, save :: summationMethodChecked = .false. |
89 |
+ |
real(kind=DP), save :: defaultCutoff = 0.0_DP |
90 |
+ |
real(kind=DP), save :: defaultCutoff2 = 0.0_DP |
91 |
+ |
logical, save :: haveDefaultCutoff = .false. |
92 |
+ |
real(kind=DP), save :: dampingAlpha = 0.0_DP |
93 |
+ |
real(kind=DP), save :: alpha2 = 0.0_DP |
94 |
+ |
real(kind=DP), save :: alpha4 = 0.0_DP |
95 |
+ |
real(kind=DP), save :: alpha6 = 0.0_DP |
96 |
+ |
real(kind=DP), save :: alpha8 = 0.0_DP |
97 |
+ |
logical, save :: haveDampingAlpha = .false. |
98 |
+ |
real(kind=DP), save :: dielectric = 1.0_DP |
99 |
+ |
logical, save :: haveDielectric = .false. |
100 |
+ |
real(kind=DP), save :: constEXP = 0.0_DP |
101 |
+ |
real(kind=dp), save :: rcuti = 0.0_DP |
102 |
+ |
real(kind=dp), save :: rcuti2 = 0.0_DP |
103 |
+ |
real(kind=dp), save :: rcuti3 = 0.0_DP |
104 |
+ |
real(kind=dp), save :: rcuti4 = 0.0_DP |
105 |
+ |
real(kind=dp), save :: alphaPi = 0.0_DP |
106 |
+ |
real(kind=dp), save :: invRootPi = 0.0_DP |
107 |
+ |
real(kind=dp), save :: rrf = 1.0_DP |
108 |
+ |
real(kind=dp), save :: rt = 1.0_DP |
109 |
+ |
real(kind=dp), save :: rrfsq = 1.0_DP |
110 |
+ |
real(kind=dp), save :: preRF = 0.0_DP |
111 |
+ |
real(kind=dp), save :: preRF2 = 0.0_DP |
112 |
+ |
real(kind=dp), save :: erfcVal = 1.0_DP |
113 |
+ |
real(kind=dp), save :: derfcVal = 0.0_DP |
114 |
+ |
type(cubicSpline), save :: erfcSpline |
115 |
+ |
logical, save :: haveElectroSpline = .false. |
116 |
+ |
real(kind=dp), save :: c1 = 1.0_DP |
117 |
+ |
real(kind=dp), save :: c2 = 1.0_DP |
118 |
+ |
real(kind=dp), save :: c3 = 0.0_DP |
119 |
+ |
real(kind=dp), save :: c4 = 0.0_DP |
120 |
+ |
real(kind=dp), save :: c5 = 0.0_DP |
121 |
+ |
real(kind=dp), save :: c6 = 0.0_DP |
122 |
+ |
real(kind=dp), save :: c1c = 1.0_DP |
123 |
+ |
real(kind=dp), save :: c2c = 1.0_DP |
124 |
+ |
real(kind=dp), save :: c3c = 0.0_DP |
125 |
+ |
real(kind=dp), save :: c4c = 0.0_DP |
126 |
+ |
real(kind=dp), save :: c5c = 0.0_DP |
127 |
+ |
real(kind=dp), save :: c6c = 0.0_DP |
128 |
+ |
real(kind=dp), save :: one_third = 1.0_DP / 3.0_DP |
129 |
+ |
|
130 |
+ |
#if defined(__IFC) || defined(__PGI) |
131 |
+ |
! error function for ifc version > 7. |
132 |
+ |
real(kind=dp), external :: erfc |
133 |
+ |
#endif |
134 |
+ |
|
135 |
+ |
public :: setElectrostaticSummationMethod |
136 |
+ |
public :: setScreeningMethod |
137 |
+ |
public :: setElectrostaticCutoffRadius |
138 |
+ |
public :: setDampingAlpha |
139 |
+ |
public :: setReactionFieldDielectric |
140 |
+ |
public :: buildElectroSpline |
141 |
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public :: newElectrostaticType |
142 |
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public :: setCharge |
143 |
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public :: setDipoleMoment |
146 |
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public :: doElectrostaticPair |
147 |
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public :: getCharge |
148 |
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public :: getDipoleMoment |
149 |
< |
public :: pre22 |
149 |
> |
public :: destroyElectrostaticTypes |
150 |
> |
public :: self_self |
151 |
> |
public :: rf_self_excludes |
152 |
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|
153 |
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|
154 |
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type :: Electrostatic |
155 |
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integer :: c_ident |
156 |
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logical :: is_Charge = .false. |
157 |
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logical :: is_Dipole = .false. |
158 |
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logical :: is_SplitDipole = .false. |
159 |
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logical :: is_Quadrupole = .false. |
160 |
+ |
logical :: is_Tap = .false. |
161 |
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real(kind=DP) :: charge = 0.0_DP |
162 |
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real(kind=DP) :: dipole_moment = 0.0_DP |
163 |
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real(kind=DP) :: split_dipole_distance = 0.0_DP |
166 |
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|
167 |
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type(Electrostatic), dimension(:), allocatable :: ElectrostaticMap |
168 |
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|
169 |
+ |
logical, save :: hasElectrostaticMap |
170 |
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|
171 |
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contains |
172 |
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|
173 |
< |
subroutine newElectrostaticType(c_ident, is_Charge, is_Dipole, & |
174 |
< |
is_SplitDipole, is_Quadrupole, status) |
173 |
> |
subroutine setElectrostaticSummationMethod(the_ESM) |
174 |
> |
integer, intent(in) :: the_ESM |
175 |
> |
|
176 |
> |
if ((the_ESM .le. 0) .or. (the_ESM .gt. REACTION_FIELD)) then |
177 |
> |
call handleError("setElectrostaticSummationMethod", "Unsupported Summation Method") |
178 |
> |
endif |
179 |
> |
|
180 |
> |
summationMethod = the_ESM |
181 |
> |
|
182 |
> |
end subroutine setElectrostaticSummationMethod |
183 |
> |
|
184 |
> |
subroutine setScreeningMethod(the_SM) |
185 |
> |
integer, intent(in) :: the_SM |
186 |
> |
screeningMethod = the_SM |
187 |
> |
end subroutine setScreeningMethod |
188 |
> |
|
189 |
> |
subroutine setElectrostaticCutoffRadius(thisRcut, thisRsw) |
190 |
> |
real(kind=dp), intent(in) :: thisRcut |
191 |
> |
real(kind=dp), intent(in) :: thisRsw |
192 |
> |
defaultCutoff = thisRcut |
193 |
> |
defaultCutoff2 = defaultCutoff*defaultCutoff |
194 |
> |
rrf = defaultCutoff |
195 |
> |
rt = thisRsw |
196 |
> |
haveDefaultCutoff = .true. |
197 |
> |
end subroutine setElectrostaticCutoffRadius |
198 |
> |
|
199 |
> |
subroutine setDampingAlpha(thisAlpha) |
200 |
> |
real(kind=dp), intent(in) :: thisAlpha |
201 |
> |
dampingAlpha = thisAlpha |
202 |
> |
alpha2 = dampingAlpha*dampingAlpha |
203 |
> |
alpha4 = alpha2*alpha2 |
204 |
> |
alpha6 = alpha4*alpha2 |
205 |
> |
alpha8 = alpha4*alpha4 |
206 |
> |
haveDampingAlpha = .true. |
207 |
> |
end subroutine setDampingAlpha |
208 |
> |
|
209 |
> |
subroutine setReactionFieldDielectric(thisDielectric) |
210 |
> |
real(kind=dp), intent(in) :: thisDielectric |
211 |
> |
dielectric = thisDielectric |
212 |
> |
haveDielectric = .true. |
213 |
> |
end subroutine setReactionFieldDielectric |
214 |
> |
|
215 |
> |
subroutine buildElectroSpline() |
216 |
> |
real( kind = dp ), dimension(np) :: xvals, yvals |
217 |
> |
real( kind = dp ) :: dx, rmin, rval |
218 |
> |
integer :: i |
219 |
> |
|
220 |
> |
rmin = 0.0_dp |
221 |
> |
|
222 |
> |
dx = (defaultCutoff-rmin) / dble(np-1) |
223 |
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|
224 |
+ |
do i = 1, np |
225 |
+ |
rval = rmin + dble(i-1)*dx |
226 |
+ |
xvals(i) = rval |
227 |
+ |
yvals(i) = erfc(dampingAlpha*rval) |
228 |
+ |
enddo |
229 |
+ |
|
230 |
+ |
call newSpline(erfcSpline, xvals, yvals, .true.) |
231 |
+ |
|
232 |
+ |
haveElectroSpline = .true. |
233 |
+ |
end subroutine buildElectroSpline |
234 |
+ |
|
235 |
+ |
subroutine newElectrostaticType(c_ident, is_Charge, is_Dipole, & |
236 |
+ |
is_SplitDipole, is_Quadrupole, is_Tap, status) |
237 |
+ |
|
238 |
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integer, intent(in) :: c_ident |
239 |
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logical, intent(in) :: is_Charge |
240 |
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logical, intent(in) :: is_Dipole |
241 |
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logical, intent(in) :: is_SplitDipole |
242 |
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logical, intent(in) :: is_Quadrupole |
243 |
+ |
logical, intent(in) :: is_Tap |
244 |
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integer, intent(out) :: status |
245 |
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integer :: nAtypes, myATID, i, j |
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|
247 |
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status = 0 |
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myATID = getFirstMatchingElement(atypes, "c_ident", c_ident) |
249 |
< |
|
249 |
> |
|
250 |
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!! Be simple-minded and assume that we need an ElectrostaticMap that |
251 |
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!! is the same size as the total number of atom types |
252 |
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|
253 |
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if (.not.allocated(ElectrostaticMap)) then |
254 |
< |
|
254 |
> |
|
255 |
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nAtypes = getSize(atypes) |
256 |
< |
|
256 |
> |
|
257 |
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if (nAtypes == 0) then |
258 |
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status = -1 |
259 |
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return |
260 |
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end if |
261 |
< |
|
262 |
< |
if (.not. allocated(ElectrostaticMap)) then |
263 |
< |
allocate(ElectrostaticMap(nAtypes)) |
125 |
< |
endif |
126 |
< |
|
261 |
> |
|
262 |
> |
allocate(ElectrostaticMap(nAtypes)) |
263 |
> |
|
264 |
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end if |
265 |
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|
266 |
|
if (myATID .gt. size(ElectrostaticMap)) then |
267 |
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status = -1 |
268 |
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return |
269 |
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endif |
270 |
< |
|
270 |
> |
|
271 |
|
! set the values for ElectrostaticMap for this atom type: |
272 |
|
|
273 |
|
ElectrostaticMap(myATID)%c_ident = c_ident |
275 |
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ElectrostaticMap(myATID)%is_Dipole = is_Dipole |
276 |
|
ElectrostaticMap(myATID)%is_SplitDipole = is_SplitDipole |
277 |
|
ElectrostaticMap(myATID)%is_Quadrupole = is_Quadrupole |
278 |
< |
|
278 |
> |
ElectrostaticMap(myATID)%is_Tap = is_Tap |
279 |
> |
|
280 |
> |
hasElectrostaticMap = .true. |
281 |
> |
|
282 |
|
end subroutine newElectrostaticType |
283 |
|
|
284 |
|
subroutine setCharge(c_ident, charge, status) |
290 |
|
status = 0 |
291 |
|
myATID = getFirstMatchingElement(atypes, "c_ident", c_ident) |
292 |
|
|
293 |
< |
if (.not.allocated(ElectrostaticMap)) then |
293 |
> |
if (.not.hasElectrostaticMap) then |
294 |
|
call handleError("electrostatic", "no ElectrostaticMap was present before first call of setCharge!") |
295 |
|
status = -1 |
296 |
|
return |
306 |
|
call handleError("electrostatic", "Attempt to setCharge of an atom type that is not a charge!") |
307 |
|
status = -1 |
308 |
|
return |
309 |
< |
endif |
309 |
> |
endif |
310 |
|
|
311 |
|
ElectrostaticMap(myATID)%charge = charge |
312 |
|
end subroutine setCharge |
320 |
|
status = 0 |
321 |
|
myATID = getFirstMatchingElement(atypes, "c_ident", c_ident) |
322 |
|
|
323 |
< |
if (.not.allocated(ElectrostaticMap)) then |
323 |
> |
if (.not.hasElectrostaticMap) then |
324 |
|
call handleError("electrostatic", "no ElectrostaticMap was present before first call of setDipoleMoment!") |
325 |
|
status = -1 |
326 |
|
return |
350 |
|
status = 0 |
351 |
|
myATID = getFirstMatchingElement(atypes, "c_ident", c_ident) |
352 |
|
|
353 |
< |
if (.not.allocated(ElectrostaticMap)) then |
353 |
> |
if (.not.hasElectrostaticMap) then |
354 |
|
call handleError("electrostatic", "no ElectrostaticMap was present before first call of setSplitDipoleDistance!") |
355 |
|
status = -1 |
356 |
|
return |
380 |
|
status = 0 |
381 |
|
myATID = getFirstMatchingElement(atypes, "c_ident", c_ident) |
382 |
|
|
383 |
< |
if (.not.allocated(ElectrostaticMap)) then |
383 |
> |
if (.not.hasElectrostaticMap) then |
384 |
|
call handleError("electrostatic", "no ElectrostaticMap was present before first call of setQuadrupoleMoments!") |
385 |
|
status = -1 |
386 |
|
return |
397 |
|
status = -1 |
398 |
|
return |
399 |
|
endif |
400 |
< |
|
400 |
> |
|
401 |
|
do i = 1, 3 |
402 |
< |
ElectrostaticMap(myATID)%quadrupole_moments(i) = & |
403 |
< |
quadrupole_moments(i) |
404 |
< |
enddo |
402 |
> |
ElectrostaticMap(myATID)%quadrupole_moments(i) = & |
403 |
> |
quadrupole_moments(i) |
404 |
> |
enddo |
405 |
|
|
406 |
|
end subroutine setQuadrupoleMoments |
407 |
|
|
408 |
< |
|
408 |
> |
|
409 |
|
function getCharge(atid) result (c) |
410 |
|
integer, intent(in) :: atid |
411 |
|
integer :: localError |
412 |
|
real(kind=dp) :: c |
413 |
< |
|
414 |
< |
if (.not.allocated(ElectrostaticMap)) then |
413 |
> |
|
414 |
> |
if (.not.hasElectrostaticMap) then |
415 |
|
call handleError("electrostatic", "no ElectrostaticMap was present before first call of getCharge!") |
416 |
|
return |
417 |
|
end if |
418 |
< |
|
418 |
> |
|
419 |
|
if (.not.ElectrostaticMap(atid)%is_Charge) then |
420 |
|
call handleError("electrostatic", "getCharge was called for an atom type that isn't a charge!") |
421 |
|
return |
422 |
|
endif |
423 |
< |
|
423 |
> |
|
424 |
|
c = ElectrostaticMap(atid)%charge |
425 |
|
end function getCharge |
426 |
|
|
428 |
|
integer, intent(in) :: atid |
429 |
|
integer :: localError |
430 |
|
real(kind=dp) :: dm |
431 |
< |
|
432 |
< |
if (.not.allocated(ElectrostaticMap)) then |
431 |
> |
|
432 |
> |
if (.not.hasElectrostaticMap) then |
433 |
|
call handleError("electrostatic", "no ElectrostaticMap was present before first call of getDipoleMoment!") |
434 |
|
return |
435 |
|
end if |
436 |
< |
|
436 |
> |
|
437 |
|
if (.not.ElectrostaticMap(atid)%is_Dipole) then |
438 |
|
call handleError("electrostatic", "getDipoleMoment was called for an atom type that isn't a dipole!") |
439 |
|
return |
440 |
|
endif |
441 |
< |
|
441 |
> |
|
442 |
|
dm = ElectrostaticMap(atid)%dipole_moment |
443 |
|
end function getDipoleMoment |
444 |
|
|
445 |
< |
subroutine doElectrostaticPair(atom1, atom2, d, rij, r2, sw, & |
446 |
< |
vpair, fpair, pot, eFrame, f, t, do_pot) |
447 |
< |
|
445 |
> |
subroutine checkSummationMethod() |
446 |
> |
|
447 |
> |
if (.not.haveDefaultCutoff) then |
448 |
> |
call handleError("checkSummationMethod", "no Default Cutoff set!") |
449 |
> |
endif |
450 |
> |
|
451 |
> |
rcuti = 1.0_dp / defaultCutoff |
452 |
> |
rcuti2 = rcuti*rcuti |
453 |
> |
rcuti3 = rcuti2*rcuti |
454 |
> |
rcuti4 = rcuti2*rcuti2 |
455 |
> |
|
456 |
> |
if (screeningMethod .eq. DAMPED) then |
457 |
> |
if (.not.haveDampingAlpha) then |
458 |
> |
call handleError("checkSummationMethod", "no Damping Alpha set!") |
459 |
> |
endif |
460 |
> |
|
461 |
> |
if (.not.haveDefaultCutoff) then |
462 |
> |
call handleError("checkSummationMethod", "no Default Cutoff set!") |
463 |
> |
endif |
464 |
> |
|
465 |
> |
constEXP = exp(-alpha2*defaultCutoff2) |
466 |
> |
invRootPi = 0.56418958354775628695_dp |
467 |
> |
alphaPi = 2.0_dp*dampingAlpha*invRootPi |
468 |
> |
|
469 |
> |
c1c = erfc(dampingAlpha*defaultCutoff) * rcuti |
470 |
> |
c2c = alphaPi*constEXP*rcuti + c1c*rcuti |
471 |
> |
c3c = 2.0_dp*alphaPi*alpha2 + 3.0_dp*c2c*rcuti |
472 |
> |
c4c = 4.0_dp*alphaPi*alpha4 + 5.0_dp*c3c*rcuti2 |
473 |
> |
c5c = 8.0_dp*alphaPi*alpha6 + 7.0_dp*c4c*rcuti2 |
474 |
> |
c6c = 16.0_dp*alphaPi*alpha8 + 9.0_dp*c5c*rcuti2 |
475 |
> |
else |
476 |
> |
c1c = rcuti |
477 |
> |
c2c = c1c*rcuti |
478 |
> |
c3c = 3.0_dp*c2c*rcuti |
479 |
> |
c4c = 5.0_dp*c3c*rcuti2 |
480 |
> |
c5c = 7.0_dp*c4c*rcuti2 |
481 |
> |
c6c = 9.0_dp*c5c*rcuti2 |
482 |
> |
endif |
483 |
> |
|
484 |
> |
if (summationMethod .eq. REACTION_FIELD) then |
485 |
> |
if (haveDielectric) then |
486 |
> |
defaultCutoff2 = defaultCutoff*defaultCutoff |
487 |
> |
preRF = (dielectric-1.0_dp) / & |
488 |
> |
((2.0_dp*dielectric+1.0_dp)*defaultCutoff2*defaultCutoff) |
489 |
> |
preRF2 = 2.0_dp*preRF |
490 |
> |
else |
491 |
> |
call handleError("checkSummationMethod", "Dielectric not set") |
492 |
> |
endif |
493 |
> |
|
494 |
> |
endif |
495 |
> |
|
496 |
> |
if (.not.haveElectroSpline) then |
497 |
> |
call buildElectroSpline() |
498 |
> |
end if |
499 |
> |
|
500 |
> |
summationMethodChecked = .true. |
501 |
> |
end subroutine checkSummationMethod |
502 |
> |
|
503 |
> |
|
504 |
> |
subroutine doElectrostaticPair(atom1, atom2, d, rij, r2, rcut, sw, & |
505 |
> |
vpair, fpair, pot, eFrame, f, t, do_pot) |
506 |
> |
|
507 |
|
logical, intent(in) :: do_pot |
508 |
< |
|
508 |
> |
|
509 |
|
integer, intent(in) :: atom1, atom2 |
510 |
|
integer :: localError |
511 |
|
|
512 |
< |
real(kind=dp), intent(in) :: rij, r2, sw |
512 |
> |
real(kind=dp), intent(in) :: rij, r2, sw, rcut |
513 |
|
real(kind=dp), intent(in), dimension(3) :: d |
514 |
|
real(kind=dp), intent(inout) :: vpair |
515 |
< |
real(kind=dp), intent(inout), dimension(3) :: fpair |
515 |
> |
real(kind=dp), intent(inout), dimension(3) :: fpair |
516 |
|
|
517 |
|
real( kind = dp ) :: pot |
518 |
|
real( kind = dp ), dimension(9,nLocal) :: eFrame |
519 |
|
real( kind = dp ), dimension(3,nLocal) :: f |
520 |
+ |
real( kind = dp ), dimension(3,nLocal) :: felec |
521 |
|
real( kind = dp ), dimension(3,nLocal) :: t |
522 |
< |
|
522 |
> |
|
523 |
|
real (kind = dp), dimension(3) :: ux_i, uy_i, uz_i |
524 |
|
real (kind = dp), dimension(3) :: ux_j, uy_j, uz_j |
525 |
|
real (kind = dp), dimension(3) :: dudux_i, duduy_i, duduz_i |
527 |
|
|
528 |
|
logical :: i_is_Charge, i_is_Dipole, i_is_SplitDipole, i_is_Quadrupole |
529 |
|
logical :: j_is_Charge, j_is_Dipole, j_is_SplitDipole, j_is_Quadrupole |
530 |
+ |
logical :: i_is_Tap, j_is_Tap |
531 |
|
integer :: me1, me2, id1, id2 |
532 |
|
real (kind=dp) :: q_i, q_j, mu_i, mu_j, d_i, d_j |
533 |
|
real (kind=dp) :: qxx_i, qyy_i, qzz_i |
535 |
|
real (kind=dp) :: cx_i, cy_i, cz_i |
536 |
|
real (kind=dp) :: cx_j, cy_j, cz_j |
537 |
|
real (kind=dp) :: cx2, cy2, cz2 |
538 |
< |
real (kind=dp) :: ct_i, ct_j, ct_ij, a1 |
538 |
> |
real (kind=dp) :: ct_i, ct_j, ct_ij, a0, a1 |
539 |
|
real (kind=dp) :: riji, ri, ri2, ri3, ri4 |
540 |
< |
real (kind=dp) :: pref, vterm, epot, dudr |
540 |
> |
real (kind=dp) :: pref, vterm, epot, dudr, vterm1, vterm2 |
541 |
|
real (kind=dp) :: xhat, yhat, zhat |
542 |
|
real (kind=dp) :: dudx, dudy, dudz |
342 |
– |
real (kind=dp) :: drdxj, drdyj, drdzj |
543 |
|
real (kind=dp) :: scale, sc2, bigR |
544 |
+ |
real (kind=dp) :: varEXP |
545 |
+ |
real (kind=dp) :: pot_term |
546 |
+ |
real (kind=dp) :: preVal, rfVal |
547 |
+ |
real (kind=dp) :: c2ri, c3ri, c4rij |
548 |
+ |
real (kind=dp) :: cti3, ctj3, ctidotj |
549 |
+ |
real (kind=dp) :: preSw, preSwSc |
550 |
+ |
real (kind=dp) :: xhatdot2, yhatdot2, zhatdot2 |
551 |
+ |
real (kind=dp) :: xhatc4, yhatc4, zhatc4 |
552 |
|
|
553 |
< |
if (.not.allocated(ElectrostaticMap)) then |
554 |
< |
call handleError("electrostatic", "no ElectrostaticMap was present before first call of do_electrostatic_pair!") |
555 |
< |
return |
348 |
< |
end if |
553 |
> |
if (.not.summationMethodChecked) then |
554 |
> |
call checkSummationMethod() |
555 |
> |
endif |
556 |
|
|
557 |
|
#ifdef IS_MPI |
558 |
|
me1 = atid_Row(atom1) |
564 |
|
|
565 |
|
!! some variables we'll need independent of electrostatic type: |
566 |
|
|
567 |
< |
riji = 1.0d0 / rij |
568 |
< |
|
567 |
> |
riji = 1.0_dp / rij |
568 |
> |
|
569 |
|
xhat = d(1) * riji |
570 |
|
yhat = d(2) * riji |
571 |
|
zhat = d(3) * riji |
572 |
|
|
366 |
– |
drdxj = xhat |
367 |
– |
drdyj = yhat |
368 |
– |
drdzj = zhat |
369 |
– |
|
573 |
|
!! logicals |
371 |
– |
|
574 |
|
i_is_Charge = ElectrostaticMap(me1)%is_Charge |
575 |
|
i_is_Dipole = ElectrostaticMap(me1)%is_Dipole |
576 |
|
i_is_SplitDipole = ElectrostaticMap(me1)%is_SplitDipole |
577 |
|
i_is_Quadrupole = ElectrostaticMap(me1)%is_Quadrupole |
578 |
+ |
i_is_Tap = ElectrostaticMap(me1)%is_Tap |
579 |
|
|
580 |
|
j_is_Charge = ElectrostaticMap(me2)%is_Charge |
581 |
|
j_is_Dipole = ElectrostaticMap(me2)%is_Dipole |
582 |
|
j_is_SplitDipole = ElectrostaticMap(me2)%is_SplitDipole |
583 |
|
j_is_Quadrupole = ElectrostaticMap(me2)%is_Quadrupole |
584 |
+ |
j_is_Tap = ElectrostaticMap(me2)%is_Tap |
585 |
|
|
586 |
|
if (i_is_Charge) then |
587 |
|
q_i = ElectrostaticMap(me1)%charge |
588 |
|
endif |
589 |
< |
|
589 |
> |
|
590 |
|
if (i_is_Dipole) then |
591 |
|
mu_i = ElectrostaticMap(me1)%dipole_moment |
592 |
|
#ifdef IS_MPI |
603 |
|
if (i_is_SplitDipole) then |
604 |
|
d_i = ElectrostaticMap(me1)%split_dipole_distance |
605 |
|
endif |
606 |
< |
|
606 |
> |
duduz_i = zero |
607 |
|
endif |
608 |
|
|
609 |
|
if (i_is_Quadrupole) then |
634 |
|
cx_i = ux_i(1)*xhat + ux_i(2)*yhat + ux_i(3)*zhat |
635 |
|
cy_i = uy_i(1)*xhat + uy_i(2)*yhat + uy_i(3)*zhat |
636 |
|
cz_i = uz_i(1)*xhat + uz_i(2)*yhat + uz_i(3)*zhat |
637 |
+ |
dudux_i = zero |
638 |
+ |
duduy_i = zero |
639 |
+ |
duduz_i = zero |
640 |
|
endif |
641 |
|
|
435 |
– |
|
642 |
|
if (j_is_Charge) then |
643 |
|
q_j = ElectrostaticMap(me2)%charge |
644 |
|
endif |
645 |
< |
|
645 |
> |
|
646 |
|
if (j_is_Dipole) then |
647 |
|
mu_j = ElectrostaticMap(me2)%dipole_moment |
648 |
|
#ifdef IS_MPI |
654 |
|
uz_j(2) = eFrame(6,atom2) |
655 |
|
uz_j(3) = eFrame(9,atom2) |
656 |
|
#endif |
657 |
< |
ct_j = uz_j(1)*drdxj + uz_j(2)*drdyj + uz_j(3)*drdzj |
657 |
> |
ct_j = uz_j(1)*xhat + uz_j(2)*yhat + uz_j(3)*zhat |
658 |
|
|
659 |
|
if (j_is_SplitDipole) then |
660 |
|
d_j = ElectrostaticMap(me2)%split_dipole_distance |
661 |
|
endif |
662 |
+ |
duduz_j = zero |
663 |
|
endif |
664 |
|
|
665 |
|
if (j_is_Quadrupole) then |
690 |
|
cx_j = ux_j(1)*xhat + ux_j(2)*yhat + ux_j(3)*zhat |
691 |
|
cy_j = uy_j(1)*xhat + uy_j(2)*yhat + uy_j(3)*zhat |
692 |
|
cz_j = uz_j(1)*xhat + uz_j(2)*yhat + uz_j(3)*zhat |
693 |
+ |
dudux_j = zero |
694 |
+ |
duduy_j = zero |
695 |
+ |
duduz_j = zero |
696 |
|
endif |
697 |
+ |
|
698 |
+ |
epot = zero |
699 |
+ |
dudx = zero |
700 |
+ |
dudy = zero |
701 |
+ |
dudz = zero |
702 |
|
|
703 |
< |
epot = 0.0_dp |
489 |
< |
dudx = 0.0_dp |
490 |
< |
dudy = 0.0_dp |
491 |
< |
dudz = 0.0_dp |
703 |
> |
if (i_is_Charge) then |
704 |
|
|
705 |
< |
dudux_i = 0.0_dp |
706 |
< |
duduy_i = 0.0_dp |
707 |
< |
duduz_i = 0.0_dp |
705 |
> |
if (j_is_Charge) then |
706 |
> |
if (screeningMethod .eq. DAMPED) then |
707 |
> |
! assemble the damping variables |
708 |
> |
call lookupUniformSpline1d(erfcSpline, rij, erfcVal, derfcVal) |
709 |
> |
c1 = erfcVal*riji |
710 |
> |
c2 = (-derfcVal + c1)*riji |
711 |
> |
else |
712 |
> |
c1 = riji |
713 |
> |
c2 = c1*riji |
714 |
> |
endif |
715 |
|
|
716 |
< |
dudux_j = 0.0_dp |
498 |
< |
duduy_j = 0.0_dp |
499 |
< |
duduz_j = 0.0_dp |
716 |
> |
preVal = pre11 * q_i * q_j |
717 |
|
|
718 |
< |
if (i_is_Charge) then |
718 |
> |
if (summationMethod .eq. SHIFTED_POTENTIAL) then |
719 |
> |
vterm = preVal * (c1 - c1c) |
720 |
> |
|
721 |
> |
dudr = -sw * preVal * c2 |
722 |
> |
|
723 |
> |
elseif (summationMethod .eq. SHIFTED_FORCE) then |
724 |
> |
vterm = preVal * ( c1 - c1c + c2c*(rij - defaultCutoff) ) |
725 |
> |
|
726 |
> |
dudr = sw * preVal * (c2c - c2) |
727 |
> |
|
728 |
> |
elseif (summationMethod .eq. REACTION_FIELD) then |
729 |
> |
rfVal = preRF*rij*rij |
730 |
> |
vterm = preVal * ( riji + rfVal ) |
731 |
> |
|
732 |
> |
dudr = sw * preVal * ( 2.0_dp*rfVal - riji )*riji |
733 |
> |
|
734 |
> |
else |
735 |
> |
vterm = preVal * riji*erfcVal |
736 |
> |
|
737 |
> |
dudr = - sw * preVal * c2 |
738 |
> |
|
739 |
> |
endif |
740 |
|
|
503 |
– |
if (j_is_Charge) then |
504 |
– |
|
505 |
– |
vterm = pre11 * q_i * q_j * riji |
741 |
|
vpair = vpair + vterm |
742 |
|
epot = epot + sw*vterm |
743 |
|
|
744 |
< |
dudr = - sw * vterm * riji |
744 |
> |
dudx = dudx + dudr * xhat |
745 |
> |
dudy = dudy + dudr * yhat |
746 |
> |
dudz = dudz + dudr * zhat |
747 |
|
|
511 |
– |
dudx = dudx + dudr * drdxj |
512 |
– |
dudy = dudy + dudr * drdyj |
513 |
– |
dudz = dudz + dudr * drdzj |
514 |
– |
|
748 |
|
endif |
749 |
|
|
750 |
|
if (j_is_Dipole) then |
751 |
+ |
! pref is used by all the possible methods |
752 |
+ |
pref = pre12 * q_i * mu_j |
753 |
+ |
preSw = sw*pref |
754 |
|
|
755 |
< |
if (j_is_SplitDipole) then |
756 |
< |
BigR = sqrt(r2 + 0.25_dp * d_j * d_j) |
757 |
< |
ri = 1.0_dp / BigR |
758 |
< |
scale = rij * ri |
759 |
< |
else |
760 |
< |
ri = riji |
761 |
< |
scale = 1.0_dp |
526 |
< |
endif |
527 |
< |
|
528 |
< |
ri2 = ri * ri |
529 |
< |
ri3 = ri2 * ri |
530 |
< |
sc2 = scale * scale |
755 |
> |
if (summationMethod .eq. REACTION_FIELD) then |
756 |
> |
ri2 = riji * riji |
757 |
> |
ri3 = ri2 * riji |
758 |
> |
|
759 |
> |
vterm = - pref * ct_j * ( ri2 - preRF2*rij ) |
760 |
> |
vpair = vpair + vterm |
761 |
> |
epot = epot + sw*vterm |
762 |
|
|
763 |
< |
pref = pre12 * q_i * mu_j |
764 |
< |
vterm = - pref * ct_j * ri2 * scale |
765 |
< |
vpair = vpair + vterm |
766 |
< |
epot = epot + sw * vterm |
763 |
> |
dudx = dudx - preSw*( ri3*(uz_j(1) - 3.0_dp*ct_j*xhat) - & |
764 |
> |
preRF2*uz_j(1) ) |
765 |
> |
dudy = dudy - preSw*( ri3*(uz_j(2) - 3.0_dp*ct_j*yhat) - & |
766 |
> |
preRF2*uz_j(2) ) |
767 |
> |
dudz = dudz - preSw*( ri3*(uz_j(3) - 3.0_dp*ct_j*zhat) - & |
768 |
> |
preRF2*uz_j(3) ) |
769 |
> |
duduz_j(1) = duduz_j(1) - preSw * xhat * ( ri2 - preRF2*rij ) |
770 |
> |
duduz_j(2) = duduz_j(2) - preSw * yhat * ( ri2 - preRF2*rij ) |
771 |
> |
duduz_j(3) = duduz_j(3) - preSw * zhat * ( ri2 - preRF2*rij ) |
772 |
|
|
773 |
< |
!! this has a + sign in the () because the rij vector is |
774 |
< |
!! r_j - r_i and the charge-dipole potential takes the origin |
775 |
< |
!! as the point dipole, which is atom j in this case. |
776 |
< |
|
777 |
< |
dudx = dudx - pref * sw * ri3 * ( uz_j(1) - 3.0d0*ct_j*xhat*sc2) |
778 |
< |
dudy = dudy - pref * sw * ri3 * ( uz_j(2) - 3.0d0*ct_j*yhat*sc2) |
779 |
< |
dudz = dudz - pref * sw * ri3 * ( uz_j(3) - 3.0d0*ct_j*zhat*sc2) |
773 |
> |
else |
774 |
> |
! determine the inverse r used if we have split dipoles |
775 |
> |
if (j_is_SplitDipole) then |
776 |
> |
BigR = sqrt(r2 + 0.25_dp * d_j * d_j) |
777 |
> |
ri = 1.0_dp / BigR |
778 |
> |
scale = rij * ri |
779 |
> |
else |
780 |
> |
ri = riji |
781 |
> |
scale = 1.0_dp |
782 |
> |
endif |
783 |
|
|
784 |
< |
duduz_j(1) = duduz_j(1) - pref * sw * ri2 * xhat * scale |
785 |
< |
duduz_j(2) = duduz_j(2) - pref * sw * ri2 * yhat * scale |
786 |
< |
duduz_j(3) = duduz_j(3) - pref * sw * ri2 * zhat * scale |
787 |
< |
|
784 |
> |
sc2 = scale * scale |
785 |
> |
|
786 |
> |
if (screeningMethod .eq. DAMPED) then |
787 |
> |
! assemble the damping variables |
788 |
> |
call lookupUniformSpline1d(erfcSpline, rij, erfcVal, derfcVal) |
789 |
> |
c1 = erfcVal*ri |
790 |
> |
c2 = (-derfcVal + c1)*ri |
791 |
> |
c3 = -2.0_dp*derfcVal*alpha2 + 3.0_dp*c2*ri |
792 |
> |
else |
793 |
> |
c1 = ri |
794 |
> |
c2 = c1*ri |
795 |
> |
c3 = 3.0_dp*c2*ri |
796 |
> |
endif |
797 |
> |
|
798 |
> |
c2ri = c2*ri |
799 |
> |
|
800 |
> |
! calculate the potential |
801 |
> |
pot_term = scale * c2 |
802 |
> |
vterm = -pref * ct_j * pot_term |
803 |
> |
vpair = vpair + vterm |
804 |
> |
epot = epot + sw*vterm |
805 |
> |
|
806 |
> |
! calculate derivatives for forces and torques |
807 |
> |
dudx = dudx - preSw*( uz_j(1)*c2ri - ct_j*xhat*sc2*c3 ) |
808 |
> |
dudy = dudy - preSw*( uz_j(2)*c2ri - ct_j*yhat*sc2*c3 ) |
809 |
> |
dudz = dudz - preSw*( uz_j(3)*c2ri - ct_j*zhat*sc2*c3 ) |
810 |
> |
|
811 |
> |
duduz_j(1) = duduz_j(1) - preSw * pot_term * xhat |
812 |
> |
duduz_j(2) = duduz_j(2) - preSw * pot_term * yhat |
813 |
> |
duduz_j(3) = duduz_j(3) - preSw * pot_term * zhat |
814 |
> |
|
815 |
> |
endif |
816 |
|
endif |
817 |
|
|
818 |
|
if (j_is_Quadrupole) then |
819 |
< |
ri2 = riji * riji |
553 |
< |
ri3 = ri2 * riji |
554 |
< |
ri4 = ri2 * ri2 |
819 |
> |
! first precalculate some necessary variables |
820 |
|
cx2 = cx_j * cx_j |
821 |
|
cy2 = cy_j * cy_j |
822 |
|
cz2 = cz_j * cz_j |
823 |
+ |
pref = pre14 * q_i * one_third |
824 |
+ |
|
825 |
+ |
if (screeningMethod .eq. DAMPED) then |
826 |
+ |
! assemble the damping variables |
827 |
+ |
call lookupUniformSpline1d(erfcSpline, rij, erfcVal, derfcVal) |
828 |
+ |
c1 = erfcVal*riji |
829 |
+ |
c2 = (-derfcVal + c1)*riji |
830 |
+ |
c3 = -2.0_dp*derfcVal*alpha2 + 3.0_dp*c2*riji |
831 |
+ |
c4 = -4.0_dp*derfcVal*alpha4 + 5.0_dp*c3*riji*riji |
832 |
+ |
else |
833 |
+ |
c1 = riji |
834 |
+ |
c2 = c1*riji |
835 |
+ |
c3 = 3.0_dp*c2*riji |
836 |
+ |
c4 = 5.0_dp*c3*riji*riji |
837 |
+ |
endif |
838 |
|
|
839 |
+ |
! precompute variables for convenience |
840 |
+ |
preSw = sw*pref |
841 |
+ |
c2ri = c2*riji |
842 |
+ |
c3ri = c3*riji |
843 |
+ |
c4rij = c4*rij |
844 |
+ |
xhatdot2 = 2.0_dp*xhat*c3 |
845 |
+ |
yhatdot2 = 2.0_dp*yhat*c3 |
846 |
+ |
zhatdot2 = 2.0_dp*zhat*c3 |
847 |
+ |
xhatc4 = xhat*c4rij |
848 |
+ |
yhatc4 = yhat*c4rij |
849 |
+ |
zhatc4 = zhat*c4rij |
850 |
|
|
851 |
< |
pref = pre14 * q_i / 1.0_dp |
852 |
< |
vterm = pref * ri3 * (qxx_j * (3.0_dp*cx2 - 1.0_dp) + & |
853 |
< |
qyy_j * (3.0_dp*cy2 - 1.0_dp) + & |
854 |
< |
qzz_j * (3.0_dp*cz2 - 1.0_dp)) |
851 |
> |
! calculate the potential |
852 |
> |
pot_term = ( qxx_j*(cx2*c3 - c2ri) + qyy_j*(cy2*c3 - c2ri) + & |
853 |
> |
qzz_j*(cz2*c3 - c2ri) ) |
854 |
> |
vterm = pref * pot_term |
855 |
|
vpair = vpair + vterm |
856 |
< |
epot = epot + sw * vterm |
856 |
> |
epot = epot + sw*vterm |
857 |
|
|
858 |
< |
dudx = dudx - 5.0_dp*sw*vterm*riji*xhat + pref * sw * ri4 * ( & |
859 |
< |
qxx_j*(6.0_dp*cx_j*ux_j(1) - 2.0_dp*xhat) + & |
860 |
< |
qyy_j*(6.0_dp*cy_j*uy_j(1) - 2.0_dp*xhat) + & |
861 |
< |
qzz_j*(6.0_dp*cz_j*uz_j(1) - 2.0_dp*xhat) ) |
862 |
< |
dudy = dudy - 5.0_dp*sw*vterm*riji*yhat + pref * sw * ri4 * ( & |
863 |
< |
qxx_j*(6.0_dp*cx_j*ux_j(2) - 2.0_dp*yhat) + & |
864 |
< |
qyy_j*(6.0_dp*cy_j*uy_j(2) - 2.0_dp*yhat) + & |
865 |
< |
qzz_j*(6.0_dp*cz_j*uz_j(2) - 2.0_dp*yhat) ) |
866 |
< |
dudz = dudz - 5.0_dp*sw*vterm*riji*zhat + pref * sw * ri4 * ( & |
867 |
< |
qxx_j*(6.0_dp*cx_j*ux_j(3) - 2.0_dp*zhat) + & |
868 |
< |
qyy_j*(6.0_dp*cy_j*uy_j(3) - 2.0_dp*zhat) + & |
869 |
< |
qzz_j*(6.0_dp*cz_j*uz_j(3) - 2.0_dp*zhat) ) |
858 |
> |
! calculate derivatives for the forces and torques |
859 |
> |
dudx = dudx - preSw * ( & |
860 |
> |
qxx_j*(cx2*xhatc4 - (2.0_dp*cx_j*ux_j(1) + xhat)*c3ri) + & |
861 |
> |
qyy_j*(cy2*xhatc4 - (2.0_dp*cy_j*uy_j(1) + xhat)*c3ri) + & |
862 |
> |
qzz_j*(cz2*xhatc4 - (2.0_dp*cz_j*uz_j(1) + xhat)*c3ri) ) |
863 |
> |
dudy = dudy - preSw * ( & |
864 |
> |
qxx_j*(cx2*yhatc4 - (2.0_dp*cx_j*ux_j(2) + yhat)*c3ri) + & |
865 |
> |
qyy_j*(cy2*yhatc4 - (2.0_dp*cy_j*uy_j(2) + yhat)*c3ri) + & |
866 |
> |
qzz_j*(cz2*yhatc4 - (2.0_dp*cz_j*uz_j(2) + yhat)*c3ri) ) |
867 |
> |
dudz = dudz - preSw * ( & |
868 |
> |
qxx_j*(cx2*zhatc4 - (2.0_dp*cx_j*ux_j(3) + zhat)*c3ri) + & |
869 |
> |
qyy_j*(cy2*zhatc4 - (2.0_dp*cy_j*uy_j(3) + zhat)*c3ri) + & |
870 |
> |
qzz_j*(cz2*zhatc4 - (2.0_dp*cz_j*uz_j(3) + zhat)*c3ri) ) |
871 |
|
|
872 |
< |
dudux_j(1) = dudux_j(1) + pref * sw * ri3 * (qxx_j*6.0_dp*cx_j*xhat) |
873 |
< |
dudux_j(2) = dudux_j(2) + pref * sw * ri3 * (qxx_j*6.0_dp*cx_j*yhat) |
874 |
< |
dudux_j(3) = dudux_j(3) + pref * sw * ri3 * (qxx_j*6.0_dp*cx_j*zhat) |
872 |
> |
dudux_j(1) = dudux_j(1) + preSw*(qxx_j*cx_j*xhatdot2) |
873 |
> |
dudux_j(2) = dudux_j(2) + preSw*(qxx_j*cx_j*yhatdot2) |
874 |
> |
dudux_j(3) = dudux_j(3) + preSw*(qxx_j*cx_j*zhatdot2) |
875 |
> |
|
876 |
> |
duduy_j(1) = duduy_j(1) + preSw*(qyy_j*cy_j*xhatdot2) |
877 |
> |
duduy_j(2) = duduy_j(2) + preSw*(qyy_j*cy_j*yhatdot2) |
878 |
> |
duduy_j(3) = duduy_j(3) + preSw*(qyy_j*cy_j*zhatdot2) |
879 |
> |
|
880 |
> |
duduz_j(1) = duduz_j(1) + preSw*(qzz_j*cz_j*xhatdot2) |
881 |
> |
duduz_j(2) = duduz_j(2) + preSw*(qzz_j*cz_j*yhatdot2) |
882 |
> |
duduz_j(3) = duduz_j(3) + preSw*(qzz_j*cz_j*zhatdot2) |
883 |
|
|
884 |
< |
duduy_j(1) = duduy_j(1) + pref * sw * ri3 * (qyy_j*6.0_dp*cy_j*xhat) |
585 |
< |
duduy_j(2) = duduy_j(2) + pref * sw * ri3 * (qyy_j*6.0_dp*cy_j*yhat) |
586 |
< |
duduy_j(3) = duduy_j(3) + pref * sw * ri3 * (qyy_j*6.0_dp*cy_j*zhat) |
587 |
< |
|
588 |
< |
duduz_j(1) = duduz_j(1) + pref * sw * ri3 * (qzz_j*6.0_dp*cz_j*xhat) |
589 |
< |
duduz_j(2) = duduz_j(2) + pref * sw * ri3 * (qzz_j*6.0_dp*cz_j*yhat) |
590 |
< |
duduz_j(3) = duduz_j(3) + pref * sw * ri3 * (qzz_j*6.0_dp*cz_j*zhat) |
884 |
> |
|
885 |
|
endif |
592 |
– |
|
886 |
|
endif |
887 |
< |
|
887 |
> |
|
888 |
|
if (i_is_Dipole) then |
889 |
< |
|
889 |
> |
|
890 |
|
if (j_is_Charge) then |
891 |
+ |
! variables used by all the methods |
892 |
+ |
pref = pre12 * q_j * mu_i |
893 |
+ |
preSw = sw*pref |
894 |
|
|
895 |
< |
if (i_is_SplitDipole) then |
600 |
< |
BigR = sqrt(r2 + 0.25_dp * d_i * d_i) |
601 |
< |
ri = 1.0_dp / BigR |
602 |
< |
scale = rij * ri |
603 |
< |
else |
604 |
< |
ri = riji |
605 |
< |
scale = 1.0_dp |
606 |
< |
endif |
895 |
> |
if (summationMethod .eq. REACTION_FIELD) then |
896 |
|
|
897 |
< |
ri2 = ri * ri |
898 |
< |
ri3 = ri2 * ri |
899 |
< |
sc2 = scale * scale |
897 |
> |
ri2 = riji * riji |
898 |
> |
ri3 = ri2 * riji |
899 |
> |
|
900 |
> |
vterm = pref * ct_i * ( ri2 - preRF2*rij ) |
901 |
> |
vpair = vpair + vterm |
902 |
> |
epot = epot + sw*vterm |
903 |
|
|
904 |
< |
pref = pre12 * q_j * mu_i |
905 |
< |
vterm = pref * ct_i * ri2 * scale |
906 |
< |
vpair = vpair + vterm |
907 |
< |
epot = epot + sw * vterm |
904 |
> |
dudx = dudx + preSw * ( ri3*(uz_i(1) - 3.0_dp*ct_i*xhat) - & |
905 |
> |
preRF2*uz_i(1) ) |
906 |
> |
dudy = dudy + preSw * ( ri3*(uz_i(2) - 3.0_dp*ct_i*yhat) - & |
907 |
> |
preRF2*uz_i(2) ) |
908 |
> |
dudz = dudz + preSw * ( ri3*(uz_i(3) - 3.0_dp*ct_i*zhat) - & |
909 |
> |
preRF2*uz_i(3) ) |
910 |
> |
|
911 |
> |
duduz_i(1) = duduz_i(1) + preSw * xhat * ( ri2 - preRF2*rij ) |
912 |
> |
duduz_i(2) = duduz_i(2) + preSw * yhat * ( ri2 - preRF2*rij ) |
913 |
> |
duduz_i(3) = duduz_i(3) + preSw * zhat * ( ri2 - preRF2*rij ) |
914 |
|
|
915 |
< |
dudx = dudx + pref * sw * ri3 * ( uz_i(1) - 3.0d0 * ct_i * xhat*sc2) |
916 |
< |
dudy = dudy + pref * sw * ri3 * ( uz_i(2) - 3.0d0 * ct_i * yhat*sc2) |
917 |
< |
dudz = dudz + pref * sw * ri3 * ( uz_i(3) - 3.0d0 * ct_i * zhat*sc2) |
915 |
> |
else |
916 |
> |
! determine inverse r if we are using split dipoles |
917 |
> |
if (i_is_SplitDipole) then |
918 |
> |
BigR = sqrt(r2 + 0.25_dp * d_i * d_i) |
919 |
> |
ri = 1.0_dp / BigR |
920 |
> |
scale = rij * ri |
921 |
> |
else |
922 |
> |
ri = riji |
923 |
> |
scale = 1.0_dp |
924 |
> |
endif |
925 |
> |
|
926 |
> |
sc2 = scale * scale |
927 |
> |
|
928 |
> |
if (screeningMethod .eq. DAMPED) then |
929 |
> |
! assemble the damping variables |
930 |
> |
call lookupUniformSpline1d(erfcSpline, rij, erfcVal, derfcVal) |
931 |
> |
c1 = erfcVal*ri |
932 |
> |
c2 = (-derfcVal + c1)*ri |
933 |
> |
c3 = -2.0_dp*derfcVal*alpha2 + 3.0_dp*c2*ri |
934 |
> |
else |
935 |
> |
c1 = ri |
936 |
> |
c2 = c1*ri |
937 |
> |
c3 = 3.0_dp*c2*ri |
938 |
> |
endif |
939 |
> |
|
940 |
> |
c2ri = c2*ri |
941 |
|
|
942 |
< |
duduz_i(1) = duduz_i(1) + pref * sw * ri2 * xhat * scale |
943 |
< |
duduz_i(2) = duduz_i(2) + pref * sw * ri2 * yhat * scale |
944 |
< |
duduz_i(3) = duduz_i(3) + pref * sw * ri2 * zhat * scale |
945 |
< |
endif |
942 |
> |
! calculate the potential |
943 |
> |
pot_term = c2 * scale |
944 |
> |
vterm = pref * ct_i * pot_term |
945 |
> |
vpair = vpair + vterm |
946 |
> |
epot = epot + sw*vterm |
947 |
|
|
948 |
+ |
! calculate derivatives for the forces and torques |
949 |
+ |
dudx = dudx + preSw * ( uz_i(1)*c2ri - ct_i*xhat*sc2*c3 ) |
950 |
+ |
dudy = dudy + preSw * ( uz_i(2)*c2ri - ct_i*yhat*sc2*c3 ) |
951 |
+ |
dudz = dudz + preSw * ( uz_i(3)*c2ri - ct_i*zhat*sc2*c3 ) |
952 |
+ |
|
953 |
+ |
duduz_i(1) = duduz_i(1) + preSw * pot_term * xhat |
954 |
+ |
duduz_i(2) = duduz_i(2) + preSw * pot_term * yhat |
955 |
+ |
duduz_i(3) = duduz_i(3) + preSw * pot_term * zhat |
956 |
+ |
|
957 |
+ |
endif |
958 |
+ |
endif |
959 |
+ |
|
960 |
|
if (j_is_Dipole) then |
961 |
+ |
! variables used by all methods |
962 |
+ |
ct_ij = uz_i(1)*uz_j(1) + uz_i(2)*uz_j(2) + uz_i(3)*uz_j(3) |
963 |
+ |
pref = pre22 * mu_i * mu_j |
964 |
+ |
preSw = sw*pref |
965 |
|
|
966 |
< |
if (i_is_SplitDipole) then |
967 |
< |
if (j_is_SplitDipole) then |
968 |
< |
BigR = sqrt(r2 + 0.25_dp * d_i * d_i + 0.25_dp * d_j * d_j) |
969 |
< |
else |
970 |
< |
BigR = sqrt(r2 + 0.25_dp * d_i * d_i) |
971 |
< |
endif |
972 |
< |
ri = 1.0_dp / BigR |
973 |
< |
scale = rij * ri |
966 |
> |
if (summationMethod .eq. REACTION_FIELD) then |
967 |
> |
ri2 = riji * riji |
968 |
> |
ri3 = ri2 * riji |
969 |
> |
ri4 = ri2 * ri2 |
970 |
> |
|
971 |
> |
vterm = pref*( ri3*(ct_ij - 3.0_dp * ct_i * ct_j) - & |
972 |
> |
preRF2*ct_ij ) |
973 |
> |
vpair = vpair + vterm |
974 |
> |
epot = epot + sw*vterm |
975 |
> |
|
976 |
> |
a1 = 5.0_dp * ct_i * ct_j - ct_ij |
977 |
> |
|
978 |
> |
dudx = dudx + preSw*3.0_dp*ri4*(a1*xhat-ct_i*uz_j(1)-ct_j*uz_i(1)) |
979 |
> |
dudy = dudy + preSw*3.0_dp*ri4*(a1*yhat-ct_i*uz_j(2)-ct_j*uz_i(2)) |
980 |
> |
dudz = dudz + preSw*3.0_dp*ri4*(a1*zhat-ct_i*uz_j(3)-ct_j*uz_i(3)) |
981 |
> |
|
982 |
> |
duduz_i(1) = duduz_i(1) + preSw*(ri3*(uz_j(1)-3.0_dp*ct_j*xhat) & |
983 |
> |
- preRF2*uz_j(1)) |
984 |
> |
duduz_i(2) = duduz_i(2) + preSw*(ri3*(uz_j(2)-3.0_dp*ct_j*yhat) & |
985 |
> |
- preRF2*uz_j(2)) |
986 |
> |
duduz_i(3) = duduz_i(3) + preSw*(ri3*(uz_j(3)-3.0_dp*ct_j*zhat) & |
987 |
> |
- preRF2*uz_j(3)) |
988 |
> |
duduz_j(1) = duduz_j(1) + preSw*(ri3*(uz_i(1)-3.0_dp*ct_i*xhat) & |
989 |
> |
- preRF2*uz_i(1)) |
990 |
> |
duduz_j(2) = duduz_j(2) + preSw*(ri3*(uz_i(2)-3.0_dp*ct_i*yhat) & |
991 |
> |
- preRF2*uz_i(2)) |
992 |
> |
duduz_j(3) = duduz_j(3) + preSw*(ri3*(uz_i(3)-3.0_dp*ct_i*zhat) & |
993 |
> |
- preRF2*uz_i(3)) |
994 |
> |
|
995 |
|
else |
996 |
< |
if (j_is_SplitDipole) then |
997 |
< |
BigR = sqrt(r2 + 0.25_dp * d_j * d_j) |
996 |
> |
if (i_is_SplitDipole) then |
997 |
> |
if (j_is_SplitDipole) then |
998 |
> |
BigR = sqrt(r2 + 0.25_dp * d_i * d_i + 0.25_dp * d_j * d_j) |
999 |
> |
else |
1000 |
> |
BigR = sqrt(r2 + 0.25_dp * d_i * d_i) |
1001 |
> |
endif |
1002 |
|
ri = 1.0_dp / BigR |
1003 |
< |
scale = rij * ri |
1004 |
< |
else |
1005 |
< |
ri = riji |
1006 |
< |
scale = 1.0_dp |
1003 |
> |
scale = rij * ri |
1004 |
> |
else |
1005 |
> |
if (j_is_SplitDipole) then |
1006 |
> |
BigR = sqrt(r2 + 0.25_dp * d_j * d_j) |
1007 |
> |
ri = 1.0_dp / BigR |
1008 |
> |
scale = rij * ri |
1009 |
> |
else |
1010 |
> |
ri = riji |
1011 |
> |
scale = 1.0_dp |
1012 |
> |
endif |
1013 |
|
endif |
645 |
– |
endif |
1014 |
|
|
1015 |
< |
ct_ij = uz_i(1)*uz_j(1) + uz_i(2)*uz_j(2) + uz_i(3)*uz_j(3) |
1015 |
> |
if (screeningMethod .eq. DAMPED) then |
1016 |
> |
! assemble the damping variables |
1017 |
> |
call lookupUniformSpline1d(erfcSpline, rij, erfcVal, derfcVal) |
1018 |
> |
c1 = erfcVal*ri |
1019 |
> |
c2 = (-derfcVal + c1)*ri |
1020 |
> |
c3 = -2.0_dp*derfcVal*alpha2 + 3.0_dp*c2*ri |
1021 |
> |
c4 = -4.0_dp*derfcVal*alpha4 + 5.0_dp*c3*ri*ri |
1022 |
> |
else |
1023 |
> |
c1 = ri |
1024 |
> |
c2 = c1*ri |
1025 |
> |
c3 = 3.0_dp*c2*ri |
1026 |
> |
c4 = 5.0_dp*c3*ri*ri |
1027 |
> |
endif |
1028 |
|
|
1029 |
< |
ri2 = ri * ri |
1030 |
< |
ri3 = ri2 * ri |
1031 |
< |
ri4 = ri2 * ri2 |
1032 |
< |
sc2 = scale * scale |
1029 |
> |
! precompute variables for convenience |
1030 |
> |
sc2 = scale * scale |
1031 |
> |
cti3 = ct_i*sc2*c3 |
1032 |
> |
ctj3 = ct_j*sc2*c3 |
1033 |
> |
ctidotj = ct_i * ct_j * sc2 |
1034 |
> |
preSwSc = preSw*scale |
1035 |
> |
c2ri = c2*ri |
1036 |
> |
c3ri = c3*ri |
1037 |
> |
c4rij = c4*rij |
1038 |
|
|
654 |
– |
pref = pre22 * mu_i * mu_j |
655 |
– |
vterm = pref * ri3 * (ct_ij - 3.0d0 * ct_i * ct_j * sc2) |
656 |
– |
vpair = vpair + vterm |
657 |
– |
epot = epot + sw * vterm |
658 |
– |
|
659 |
– |
a1 = 5.0d0 * ct_i * ct_j * sc2 - ct_ij |
1039 |
|
|
1040 |
< |
dudx=dudx+pref*sw*3.0d0*ri4*scale*(a1*xhat-ct_i*uz_j(1)-ct_j*uz_i(1)) |
1041 |
< |
dudy=dudy+pref*sw*3.0d0*ri4*scale*(a1*yhat-ct_i*uz_j(2)-ct_j*uz_i(2)) |
1042 |
< |
dudz=dudz+pref*sw*3.0d0*ri4*scale*(a1*zhat-ct_i*uz_j(3)-ct_j*uz_i(3)) |
1040 |
> |
! calculate the potential |
1041 |
> |
pot_term = (ct_ij*c2ri - ctidotj*c3) |
1042 |
> |
vterm = pref * pot_term |
1043 |
> |
vpair = vpair + vterm |
1044 |
> |
epot = epot + sw*vterm |
1045 |
|
|
1046 |
< |
duduz_i(1) = duduz_i(1) + pref*sw*ri3*(uz_j(1) - 3.0d0*ct_j*xhat*sc2) |
1047 |
< |
duduz_i(2) = duduz_i(2) + pref*sw*ri3*(uz_j(2) - 3.0d0*ct_j*yhat*sc2) |
1048 |
< |
duduz_i(3) = duduz_i(3) + pref*sw*ri3*(uz_j(3) - 3.0d0*ct_j*zhat*sc2) |
1046 |
> |
! calculate derivatives for the forces and torques |
1047 |
> |
dudx = dudx + preSwSc * ( ctidotj*xhat*c4rij - & |
1048 |
> |
(ct_i*uz_j(1) + ct_j*uz_i(1) + ct_ij*xhat)*c3ri ) |
1049 |
> |
dudy = dudy + preSwSc * ( ctidotj*yhat*c4rij - & |
1050 |
> |
(ct_i*uz_j(2) + ct_j*uz_i(2) + ct_ij*yhat)*c3ri ) |
1051 |
> |
dudz = dudz + preSwSc * ( ctidotj*zhat*c4rij - & |
1052 |
> |
(ct_i*uz_j(3) + ct_j*uz_i(3) + ct_ij*zhat)*c3ri ) |
1053 |
|
|
1054 |
< |
duduz_j(1) = duduz_j(1) + pref*sw*ri3*(uz_i(1) - 3.0d0*ct_i*xhat*sc2) |
1055 |
< |
duduz_j(2) = duduz_j(2) + pref*sw*ri3*(uz_i(2) - 3.0d0*ct_i*yhat*sc2) |
1056 |
< |
duduz_j(3) = duduz_j(3) + pref*sw*ri3*(uz_i(3) - 3.0d0*ct_i*zhat*sc2) |
1057 |
< |
endif |
1054 |
> |
duduz_i(1) = duduz_i(1) + preSw * ( uz_j(1)*c2ri - ctj3*xhat ) |
1055 |
> |
duduz_i(2) = duduz_i(2) + preSw * ( uz_j(2)*c2ri - ctj3*yhat ) |
1056 |
> |
duduz_i(3) = duduz_i(3) + preSw * ( uz_j(3)*c2ri - ctj3*zhat ) |
1057 |
> |
|
1058 |
> |
duduz_j(1) = duduz_j(1) + preSw * ( uz_i(1)*c2ri - cti3*xhat ) |
1059 |
> |
duduz_j(2) = duduz_j(2) + preSw * ( uz_i(2)*c2ri - cti3*yhat ) |
1060 |
> |
duduz_j(3) = duduz_j(3) + preSw * ( uz_i(3)*c2ri - cti3*zhat ) |
1061 |
|
|
1062 |
+ |
endif |
1063 |
+ |
endif |
1064 |
|
endif |
1065 |
|
|
1066 |
|
if (i_is_Quadrupole) then |
1067 |
|
if (j_is_Charge) then |
1068 |
+ |
if (screeningMethod .eq. DAMPED) then |
1069 |
+ |
! assemble the damping variables |
1070 |
+ |
call lookupUniformSpline1d(erfcSpline, rij, erfcVal, derfcVal) |
1071 |
+ |
c1 = erfcVal*riji |
1072 |
+ |
c2 = (-derfcVal + c1)*riji |
1073 |
+ |
c3 = -2.0_dp*derfcVal*alpha2 + 3.0_dp*c2*riji |
1074 |
+ |
c4 = -4.0_dp*derfcVal*alpha4 + 5.0_dp*c3*riji*riji |
1075 |
+ |
else |
1076 |
+ |
c1 = riji |
1077 |
+ |
c2 = c1*riji |
1078 |
+ |
c3 = 3.0_dp*c2*riji |
1079 |
+ |
c4 = 5.0_dp*c3*riji*riji |
1080 |
+ |
endif |
1081 |
|
|
1082 |
< |
ri2 = riji * riji |
680 |
< |
ri3 = ri2 * riji |
681 |
< |
ri4 = ri2 * ri2 |
1082 |
> |
! precompute some variables |
1083 |
|
cx2 = cx_i * cx_i |
1084 |
|
cy2 = cy_i * cy_i |
1085 |
|
cz2 = cz_i * cz_i |
1086 |
< |
|
1087 |
< |
pref = pre14 * q_j / 1.0_dp |
1088 |
< |
vterm = pref * ri3 * (qxx_i * (3.0_dp*cx2 - 1.0_dp) + & |
1089 |
< |
qyy_i * (3.0_dp*cy2 - 1.0_dp) + & |
1090 |
< |
qzz_i * (3.0_dp*cz2 - 1.0_dp)) |
1086 |
> |
pref = pre14 * q_j * one_third |
1087 |
> |
|
1088 |
> |
! calculate the potential |
1089 |
> |
pot_term = ( qxx_i * (cx2*c3 - c2ri) + qyy_i * (cy2*c3 - c2ri) + & |
1090 |
> |
qzz_i * (cz2*c3 - c2ri) ) |
1091 |
> |
|
1092 |
> |
vterm = pref * pot_term |
1093 |
|
vpair = vpair + vterm |
1094 |
< |
epot = epot + sw * vterm |
1095 |
< |
|
1096 |
< |
dudx = dudx - 5.0_dp*sw*vterm*riji*xhat + pref * sw * ri4 * ( & |
1097 |
< |
qxx_i*(6.0_dp*cx_i*ux_i(1) - 2.0_dp*xhat) + & |
1098 |
< |
qyy_i*(6.0_dp*cy_i*uy_i(1) - 2.0_dp*xhat) + & |
1099 |
< |
qzz_i*(6.0_dp*cz_i*uz_i(1) - 2.0_dp*xhat) ) |
1100 |
< |
dudy = dudy - 5.0_dp*sw*vterm*riji*yhat + pref * sw * ri4 * ( & |
1101 |
< |
qxx_i*(6.0_dp*cx_i*ux_i(2) - 2.0_dp*yhat) + & |
1102 |
< |
qyy_i*(6.0_dp*cy_i*uy_i(2) - 2.0_dp*yhat) + & |
1103 |
< |
qzz_i*(6.0_dp*cz_i*uz_i(2) - 2.0_dp*yhat) ) |
1104 |
< |
dudz = dudz - 5.0_dp*sw*vterm*riji*zhat + pref * sw * ri4 * ( & |
1105 |
< |
qxx_i*(6.0_dp*cx_i*ux_i(3) - 2.0_dp*zhat) + & |
1106 |
< |
qyy_i*(6.0_dp*cy_i*uy_i(3) - 2.0_dp*zhat) + & |
1107 |
< |
qzz_i*(6.0_dp*cz_i*uz_i(3) - 2.0_dp*zhat) ) |
1108 |
< |
|
1109 |
< |
dudux_i(1) = dudux_i(1) + pref * sw * ri3 * (qxx_i*6.0_dp*cx_i*xhat) |
1110 |
< |
dudux_i(2) = dudux_i(2) + pref * sw * ri3 * (qxx_i*6.0_dp*cx_i*yhat) |
1111 |
< |
dudux_i(3) = dudux_i(3) + pref * sw * ri3 * (qxx_i*6.0_dp*cx_i*zhat) |
1112 |
< |
|
1113 |
< |
duduy_i(1) = duduy_i(1) + pref * sw * ri3 * (qyy_i*6.0_dp*cy_i*xhat) |
1114 |
< |
duduy_i(2) = duduy_i(2) + pref * sw * ri3 * (qyy_i*6.0_dp*cy_i*yhat) |
1115 |
< |
duduy_i(3) = duduy_i(3) + pref * sw * ri3 * (qyy_i*6.0_dp*cy_i*zhat) |
1094 |
> |
epot = epot + sw*vterm |
1095 |
> |
|
1096 |
> |
! precompute variables for convenience |
1097 |
> |
preSw = sw*pref |
1098 |
> |
c2ri = c2*riji |
1099 |
> |
c3ri = c3*riji |
1100 |
> |
c4rij = c4*rij |
1101 |
> |
xhatdot2 = 2.0_dp*xhat*c3 |
1102 |
> |
yhatdot2 = 2.0_dp*yhat*c3 |
1103 |
> |
zhatdot2 = 2.0_dp*zhat*c3 |
1104 |
> |
xhatc4 = xhat*c4rij |
1105 |
> |
yhatc4 = yhat*c4rij |
1106 |
> |
zhatc4 = zhat*c4rij |
1107 |
> |
|
1108 |
> |
! calculate the derivatives for the forces and torques |
1109 |
> |
dudx = dudx - preSw * ( & |
1110 |
> |
qxx_i*(cx2*xhatc4 - (2.0_dp*cx_i*ux_i(1) + xhat)*c3ri) + & |
1111 |
> |
qyy_i*(cy2*xhatc4 - (2.0_dp*cy_i*uy_i(1) + xhat)*c3ri) + & |
1112 |
> |
qzz_i*(cz2*xhatc4 - (2.0_dp*cz_i*uz_i(1) + xhat)*c3ri) ) |
1113 |
> |
dudy = dudy - preSw * ( & |
1114 |
> |
qxx_i*(cx2*yhatc4 - (2.0_dp*cx_i*ux_i(2) + yhat)*c3ri) + & |
1115 |
> |
qyy_i*(cy2*yhatc4 - (2.0_dp*cy_i*uy_i(2) + yhat)*c3ri) + & |
1116 |
> |
qzz_i*(cz2*yhatc4 - (2.0_dp*cz_i*uz_i(2) + yhat)*c3ri) ) |
1117 |
> |
dudz = dudz - preSw * ( & |
1118 |
> |
qxx_i*(cx2*zhatc4 - (2.0_dp*cx_i*ux_i(3) + zhat)*c3ri) + & |
1119 |
> |
qyy_i*(cy2*zhatc4 - (2.0_dp*cy_i*uy_i(3) + zhat)*c3ri) + & |
1120 |
> |
qzz_i*(cz2*zhatc4 - (2.0_dp*cz_i*uz_i(3) + zhat)*c3ri) ) |
1121 |
|
|
1122 |
< |
duduz_i(1) = duduz_i(1) + pref * sw * ri3 * (qzz_i*6.0_dp*cz_i*xhat) |
1123 |
< |
duduz_i(2) = duduz_i(2) + pref * sw * ri3 * (qzz_i*6.0_dp*cz_i*yhat) |
1124 |
< |
duduz_i(3) = duduz_i(3) + pref * sw * ri3 * (qzz_i*6.0_dp*cz_i*zhat) |
1122 |
> |
dudux_i(1) = dudux_i(1) + preSw*(qxx_i*cx_i*xhatdot2) |
1123 |
> |
dudux_i(2) = dudux_i(2) + preSw*(qxx_i*cx_i*yhatdot2) |
1124 |
> |
dudux_i(3) = dudux_i(3) + preSw*(qxx_i*cx_i*zhatdot2) |
1125 |
> |
|
1126 |
> |
duduy_i(1) = duduy_i(1) + preSw*(qyy_i*cy_i*xhatdot2) |
1127 |
> |
duduy_i(2) = duduy_i(2) + preSw*(qyy_i*cy_i*yhatdot2) |
1128 |
> |
duduy_i(3) = duduy_i(3) + preSw*(qyy_i*cy_i*zhatdot2) |
1129 |
> |
|
1130 |
> |
duduz_i(1) = duduz_i(1) + preSw*(qzz_i*cz_i*xhatdot2) |
1131 |
> |
duduz_i(2) = duduz_i(2) + preSw*(qzz_i*cz_i*yhatdot2) |
1132 |
> |
duduz_i(3) = duduz_i(3) + preSw*(qzz_i*cz_i*zhatdot2) |
1133 |
|
endif |
1134 |
|
endif |
1135 |
< |
|
1136 |
< |
|
1135 |
> |
|
1136 |
> |
|
1137 |
|
if (do_pot) then |
1138 |
|
#ifdef IS_MPI |
1139 |
< |
pot_row(atom1) = pot_row(atom1) + 0.5d0*epot |
1140 |
< |
pot_col(atom2) = pot_col(atom2) + 0.5d0*epot |
1139 |
> |
pot_row(ELECTROSTATIC_POT,atom1) = pot_row(ELECTROSTATIC_POT,atom1) + 0.5_dp*epot |
1140 |
> |
pot_col(ELECTROSTATIC_POT,atom2) = pot_col(ELECTROSTATIC_POT,atom2) + 0.5_dp*epot |
1141 |
|
#else |
1142 |
|
pot = pot + epot |
1143 |
|
#endif |
1144 |
|
endif |
1145 |
< |
|
1145 |
> |
|
1146 |
|
#ifdef IS_MPI |
1147 |
|
f_Row(1,atom1) = f_Row(1,atom1) + dudx |
1148 |
|
f_Row(2,atom1) = f_Row(2,atom1) + dudy |
1149 |
|
f_Row(3,atom1) = f_Row(3,atom1) + dudz |
1150 |
< |
|
1150 |
> |
|
1151 |
|
f_Col(1,atom2) = f_Col(1,atom2) - dudx |
1152 |
|
f_Col(2,atom2) = f_Col(2,atom2) - dudy |
1153 |
|
f_Col(3,atom2) = f_Col(3,atom2) - dudz |
1154 |
< |
|
1154 |
> |
|
1155 |
|
if (i_is_Dipole .or. i_is_Quadrupole) then |
1156 |
|
t_Row(1,atom1)=t_Row(1,atom1) - uz_i(2)*duduz_i(3) + uz_i(3)*duduz_i(2) |
1157 |
|
t_Row(2,atom1)=t_Row(2,atom1) - uz_i(3)*duduz_i(1) + uz_i(1)*duduz_i(3) |
1186 |
|
f(1,atom1) = f(1,atom1) + dudx |
1187 |
|
f(2,atom1) = f(2,atom1) + dudy |
1188 |
|
f(3,atom1) = f(3,atom1) + dudz |
1189 |
< |
|
1189 |
> |
|
1190 |
|
f(1,atom2) = f(1,atom2) - dudx |
1191 |
|
f(2,atom2) = f(2,atom2) - dudy |
1192 |
|
f(3,atom2) = f(3,atom2) - dudz |
1193 |
< |
|
1193 |
> |
|
1194 |
|
if (i_is_Dipole .or. i_is_Quadrupole) then |
1195 |
|
t(1,atom1)=t(1,atom1) - uz_i(2)*duduz_i(3) + uz_i(3)*duduz_i(2) |
1196 |
|
t(2,atom1)=t(2,atom1) - uz_i(3)*duduz_i(1) + uz_i(1)*duduz_i(3) |
1222 |
|
endif |
1223 |
|
|
1224 |
|
#endif |
1225 |
< |
|
1225 |
> |
|
1226 |
|
#ifdef IS_MPI |
1227 |
|
id1 = AtomRowToGlobal(atom1) |
1228 |
|
id2 = AtomColToGlobal(atom2) |
1232 |
|
#endif |
1233 |
|
|
1234 |
|
if (molMembershipList(id1) .ne. molMembershipList(id2)) then |
1235 |
< |
|
1235 |
> |
|
1236 |
|
fpair(1) = fpair(1) + dudx |
1237 |
|
fpair(2) = fpair(2) + dudy |
1238 |
|
fpair(3) = fpair(3) + dudz |
1241 |
|
|
1242 |
|
return |
1243 |
|
end subroutine doElectrostaticPair |
1244 |
< |
|
1244 |
> |
|
1245 |
> |
subroutine destroyElectrostaticTypes() |
1246 |
> |
|
1247 |
> |
if(allocated(ElectrostaticMap)) deallocate(ElectrostaticMap) |
1248 |
> |
|
1249 |
> |
end subroutine destroyElectrostaticTypes |
1250 |
> |
|
1251 |
> |
subroutine self_self(atom1, eFrame, mypot, t, do_pot) |
1252 |
> |
logical, intent(in) :: do_pot |
1253 |
> |
integer, intent(in) :: atom1 |
1254 |
> |
integer :: atid1 |
1255 |
> |
real(kind=dp), dimension(9,nLocal) :: eFrame |
1256 |
> |
real(kind=dp), dimension(3,nLocal) :: t |
1257 |
> |
real(kind=dp) :: mu1, chg1 |
1258 |
> |
real(kind=dp) :: preVal, epot, mypot |
1259 |
> |
real(kind=dp) :: eix, eiy, eiz |
1260 |
> |
|
1261 |
> |
! this is a local only array, so we use the local atom type id's: |
1262 |
> |
atid1 = atid(atom1) |
1263 |
> |
|
1264 |
> |
if (.not.summationMethodChecked) then |
1265 |
> |
call checkSummationMethod() |
1266 |
> |
endif |
1267 |
> |
|
1268 |
> |
if (summationMethod .eq. REACTION_FIELD) then |
1269 |
> |
if (ElectrostaticMap(atid1)%is_Dipole) then |
1270 |
> |
mu1 = getDipoleMoment(atid1) |
1271 |
> |
|
1272 |
> |
preVal = pre22 * preRF2 * mu1*mu1 |
1273 |
> |
mypot = mypot - 0.5_dp*preVal |
1274 |
> |
|
1275 |
> |
! The self-correction term adds into the reaction field vector |
1276 |
> |
|
1277 |
> |
eix = preVal * eFrame(3,atom1) |
1278 |
> |
eiy = preVal * eFrame(6,atom1) |
1279 |
> |
eiz = preVal * eFrame(9,atom1) |
1280 |
> |
|
1281 |
> |
! once again, this is self-self, so only the local arrays are needed |
1282 |
> |
! even for MPI jobs: |
1283 |
> |
|
1284 |
> |
t(1,atom1)=t(1,atom1) - eFrame(6,atom1)*eiz + & |
1285 |
> |
eFrame(9,atom1)*eiy |
1286 |
> |
t(2,atom1)=t(2,atom1) - eFrame(9,atom1)*eix + & |
1287 |
> |
eFrame(3,atom1)*eiz |
1288 |
> |
t(3,atom1)=t(3,atom1) - eFrame(3,atom1)*eiy + & |
1289 |
> |
eFrame(6,atom1)*eix |
1290 |
> |
|
1291 |
> |
endif |
1292 |
> |
|
1293 |
> |
elseif ( (summationMethod .eq. SHIFTED_FORCE) .or. & |
1294 |
> |
(summationMethod .eq. SHIFTED_POTENTIAL) ) then |
1295 |
> |
if (ElectrostaticMap(atid1)%is_Charge) then |
1296 |
> |
chg1 = getCharge(atid1) |
1297 |
> |
|
1298 |
> |
if (screeningMethod .eq. DAMPED) then |
1299 |
> |
mypot = mypot - (c1c * 0.5_dp + & |
1300 |
> |
dampingAlpha*invRootPi) * chg1 * chg1 |
1301 |
> |
|
1302 |
> |
else |
1303 |
> |
mypot = mypot - (rcuti * 0.5_dp * chg1 * chg1) |
1304 |
> |
|
1305 |
> |
endif |
1306 |
> |
endif |
1307 |
> |
endif |
1308 |
> |
|
1309 |
> |
return |
1310 |
> |
end subroutine self_self |
1311 |
> |
|
1312 |
> |
subroutine rf_self_excludes(atom1, atom2, sw, eFrame, d, rij, vpair, myPot, & |
1313 |
> |
f, t, do_pot) |
1314 |
> |
logical, intent(in) :: do_pot |
1315 |
> |
integer, intent(in) :: atom1 |
1316 |
> |
integer, intent(in) :: atom2 |
1317 |
> |
logical :: i_is_Charge, j_is_Charge |
1318 |
> |
logical :: i_is_Dipole, j_is_Dipole |
1319 |
> |
integer :: atid1 |
1320 |
> |
integer :: atid2 |
1321 |
> |
real(kind=dp), intent(in) :: rij |
1322 |
> |
real(kind=dp), intent(in) :: sw |
1323 |
> |
real(kind=dp), intent(in), dimension(3) :: d |
1324 |
> |
real(kind=dp), intent(inout) :: vpair |
1325 |
> |
real(kind=dp), dimension(9,nLocal) :: eFrame |
1326 |
> |
real(kind=dp), dimension(3,nLocal) :: f |
1327 |
> |
real(kind=dp), dimension(3,nLocal) :: t |
1328 |
> |
real (kind = dp), dimension(3) :: duduz_i |
1329 |
> |
real (kind = dp), dimension(3) :: duduz_j |
1330 |
> |
real (kind = dp), dimension(3) :: uz_i |
1331 |
> |
real (kind = dp), dimension(3) :: uz_j |
1332 |
> |
real(kind=dp) :: q_i, q_j, mu_i, mu_j |
1333 |
> |
real(kind=dp) :: xhat, yhat, zhat |
1334 |
> |
real(kind=dp) :: ct_i, ct_j |
1335 |
> |
real(kind=dp) :: ri2, ri3, riji, vterm |
1336 |
> |
real(kind=dp) :: pref, preVal, rfVal, myPot |
1337 |
> |
real(kind=dp) :: dudx, dudy, dudz, dudr |
1338 |
> |
|
1339 |
> |
if (.not.summationMethodChecked) then |
1340 |
> |
call checkSummationMethod() |
1341 |
> |
endif |
1342 |
> |
|
1343 |
> |
dudx = zero |
1344 |
> |
dudy = zero |
1345 |
> |
dudz = zero |
1346 |
> |
|
1347 |
> |
riji = 1.0_dp/rij |
1348 |
> |
|
1349 |
> |
xhat = d(1) * riji |
1350 |
> |
yhat = d(2) * riji |
1351 |
> |
zhat = d(3) * riji |
1352 |
> |
|
1353 |
> |
! this is a local only array, so we use the local atom type id's: |
1354 |
> |
atid1 = atid(atom1) |
1355 |
> |
atid2 = atid(atom2) |
1356 |
> |
i_is_Charge = ElectrostaticMap(atid1)%is_Charge |
1357 |
> |
j_is_Charge = ElectrostaticMap(atid2)%is_Charge |
1358 |
> |
i_is_Dipole = ElectrostaticMap(atid1)%is_Dipole |
1359 |
> |
j_is_Dipole = ElectrostaticMap(atid2)%is_Dipole |
1360 |
> |
|
1361 |
> |
if (i_is_Charge.and.j_is_Charge) then |
1362 |
> |
q_i = ElectrostaticMap(atid1)%charge |
1363 |
> |
q_j = ElectrostaticMap(atid2)%charge |
1364 |
> |
|
1365 |
> |
preVal = pre11 * q_i * q_j |
1366 |
> |
rfVal = preRF*rij*rij |
1367 |
> |
vterm = preVal * rfVal |
1368 |
> |
|
1369 |
> |
myPot = myPot + sw*vterm |
1370 |
> |
|
1371 |
> |
dudr = sw*preVal * 2.0_dp*rfVal*riji |
1372 |
> |
|
1373 |
> |
dudx = dudx + dudr * xhat |
1374 |
> |
dudy = dudy + dudr * yhat |
1375 |
> |
dudz = dudz + dudr * zhat |
1376 |
> |
|
1377 |
> |
elseif (i_is_Charge.and.j_is_Dipole) then |
1378 |
> |
q_i = ElectrostaticMap(atid1)%charge |
1379 |
> |
mu_j = ElectrostaticMap(atid2)%dipole_moment |
1380 |
> |
uz_j(1) = eFrame(3,atom2) |
1381 |
> |
uz_j(2) = eFrame(6,atom2) |
1382 |
> |
uz_j(3) = eFrame(9,atom2) |
1383 |
> |
ct_j = uz_j(1)*xhat + uz_j(2)*yhat + uz_j(3)*zhat |
1384 |
> |
|
1385 |
> |
ri2 = riji * riji |
1386 |
> |
ri3 = ri2 * riji |
1387 |
> |
|
1388 |
> |
pref = pre12 * q_i * mu_j |
1389 |
> |
vterm = - pref * ct_j * ( ri2 - preRF2*rij ) |
1390 |
> |
myPot = myPot + sw*vterm |
1391 |
> |
|
1392 |
> |
dudx = dudx - sw*pref*( ri3*(uz_j(1)-3.0_dp*ct_j*xhat) & |
1393 |
> |
- preRF2*uz_j(1) ) |
1394 |
> |
dudy = dudy - sw*pref*( ri3*(uz_j(2)-3.0_dp*ct_j*yhat) & |
1395 |
> |
- preRF2*uz_j(2) ) |
1396 |
> |
dudz = dudz - sw*pref*( ri3*(uz_j(3)-3.0_dp*ct_j*zhat) & |
1397 |
> |
- preRF2*uz_j(3) ) |
1398 |
> |
|
1399 |
> |
duduz_j(1) = duduz_j(1) - sw * pref * xhat * ( ri2 - preRF2*rij ) |
1400 |
> |
duduz_j(2) = duduz_j(2) - sw * pref * yhat * ( ri2 - preRF2*rij ) |
1401 |
> |
duduz_j(3) = duduz_j(3) - sw * pref * zhat * ( ri2 - preRF2*rij ) |
1402 |
> |
|
1403 |
> |
elseif (i_is_Dipole.and.j_is_Charge) then |
1404 |
> |
mu_i = ElectrostaticMap(atid1)%dipole_moment |
1405 |
> |
q_j = ElectrostaticMap(atid2)%charge |
1406 |
> |
uz_i(1) = eFrame(3,atom1) |
1407 |
> |
uz_i(2) = eFrame(6,atom1) |
1408 |
> |
uz_i(3) = eFrame(9,atom1) |
1409 |
> |
ct_i = uz_i(1)*xhat + uz_i(2)*yhat + uz_i(3)*zhat |
1410 |
> |
|
1411 |
> |
ri2 = riji * riji |
1412 |
> |
ri3 = ri2 * riji |
1413 |
> |
|
1414 |
> |
pref = pre12 * q_j * mu_i |
1415 |
> |
vterm = pref * ct_i * ( ri2 - preRF2*rij ) |
1416 |
> |
myPot = myPot + sw*vterm |
1417 |
> |
|
1418 |
> |
dudx = dudx + sw*pref*( ri3*(uz_i(1)-3.0_dp*ct_i*xhat) & |
1419 |
> |
- preRF2*uz_i(1) ) |
1420 |
> |
dudy = dudy + sw*pref*( ri3*(uz_i(2)-3.0_dp*ct_i*yhat) & |
1421 |
> |
- preRF2*uz_i(2) ) |
1422 |
> |
dudz = dudz + sw*pref*( ri3*(uz_i(3)-3.0_dp*ct_i*zhat) & |
1423 |
> |
- preRF2*uz_i(3) ) |
1424 |
> |
|
1425 |
> |
duduz_i(1) = duduz_i(1) + sw * pref * xhat * ( ri2 - preRF2*rij ) |
1426 |
> |
duduz_i(2) = duduz_i(2) + sw * pref * yhat * ( ri2 - preRF2*rij ) |
1427 |
> |
duduz_i(3) = duduz_i(3) + sw * pref * zhat * ( ri2 - preRF2*rij ) |
1428 |
> |
|
1429 |
> |
endif |
1430 |
> |
|
1431 |
> |
|
1432 |
> |
! accumulate the forces and torques resulting from the self term |
1433 |
> |
f(1,atom1) = f(1,atom1) + dudx |
1434 |
> |
f(2,atom1) = f(2,atom1) + dudy |
1435 |
> |
f(3,atom1) = f(3,atom1) + dudz |
1436 |
> |
|
1437 |
> |
f(1,atom2) = f(1,atom2) - dudx |
1438 |
> |
f(2,atom2) = f(2,atom2) - dudy |
1439 |
> |
f(3,atom2) = f(3,atom2) - dudz |
1440 |
> |
|
1441 |
> |
if (i_is_Dipole) then |
1442 |
> |
t(1,atom1)=t(1,atom1) - uz_i(2)*duduz_i(3) + uz_i(3)*duduz_i(2) |
1443 |
> |
t(2,atom1)=t(2,atom1) - uz_i(3)*duduz_i(1) + uz_i(1)*duduz_i(3) |
1444 |
> |
t(3,atom1)=t(3,atom1) - uz_i(1)*duduz_i(2) + uz_i(2)*duduz_i(1) |
1445 |
> |
elseif (j_is_Dipole) then |
1446 |
> |
t(1,atom2)=t(1,atom2) - uz_j(2)*duduz_j(3) + uz_j(3)*duduz_j(2) |
1447 |
> |
t(2,atom2)=t(2,atom2) - uz_j(3)*duduz_j(1) + uz_j(1)*duduz_j(3) |
1448 |
> |
t(3,atom2)=t(3,atom2) - uz_j(1)*duduz_j(2) + uz_j(2)*duduz_j(1) |
1449 |
> |
endif |
1450 |
> |
|
1451 |
> |
return |
1452 |
> |
end subroutine rf_self_excludes |
1453 |
> |
|
1454 |
|
end module electrostatic_module |